mRNA_H-paniculata_contig16318.3621.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: D7FYX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYX8_ECTSI) HSP 1 Score: 150 bits (380), Expect = 2.060e-41 Identity = 92/176 (52.27%), Postives = 106/176 (60.23%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVV-------------VERGERRDGPAA---------YKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKI-RGEAEQQGEGSQTK----ELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
C+V+VPVDV+KERLQVQR G R G ++ Y+GS D LKTI+RTEGLRGIYKGY ATLASFGPFSALYFMFYE+AK S+ + PY + + G A EG + ELPV MTL NAA A A ASW TNPLD+AKLRLQV
Sbjct: 124 CVVFVPVDVVKERLQVQRPAGAAAAKYVSTAEASSGGSRAGGSSSGVREASVPPYRGSADTLKTILRTEGLRGIYKGYLATLASFGPFSALYFMFYEQAKMASQDLIERHPYFRGQGGTDARAAEGAATATTEGQSARGGRAELPVWMTLGNAAAASAAASWLTNPLDLAKLRLQV 299
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: B7G2K8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2K8_PHATC) HSP 1 Score: 141 bits (356), Expect = 2.610e-38 Identity = 79/149 (53.02%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
CI+YVPVDV+KER+QVQ+ + + P+AYK S DA + I R+EG+ GIYKGY ATL SFGPFSALYF+FYEK K S PY + SS R ELP + +AGAGALASW T+PLDMAKLRLQV
Sbjct: 127 CIIYVPVDVVKERMQVQQGL------QSSPSAYKSSWDAFQKIARSEGITGIYKGYTATLGSFGPFSALYFVFYEKLKRSSCQYVSREPYTISGSSGR---------------NTELPFPWVVGCSAGAGALASWLTSPLDMAKLRLQV 254
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: B8BTX7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTX7_THAPS) HSP 1 Score: 137 bits (346), Expect = 1.130e-36 Identity = 80/149 (53.69%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
CI+YVPVDVIKER+QVQ+ V Y GS+DA + I++TEG+ GIY+GY ATLASFGPFSALYFMFYE+ KA SR +S SR+ I Q +LP+ + +AGAGALASW T+PLDMAKLRLQV
Sbjct: 133 CIIYVPVDVIKERMQVQQRVPTAATHATQNTQYTGSLDAFQKIVKTEGMTGIYRGYGATLASFGPFSALYFMFYERCKAWSRDRL--------LSQSRDGI-----QINTPVDDGDLPLAYLVGCSAGAGALASWLTSPLDMAKLRLQV 268
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: A0A7S2UL61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL61_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.320e-35 Identity = 77/149 (51.68%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
CIVYVPVDVIKERLQVQR + G Y G +DALK I+RTEGL GIYKGY AT+ASFGPFSA+YF YE+ K +R R S+SR+ + + +E+P +A +A +GA+ASW T+PLDMAKLRLQ+
Sbjct: 132 CIVYVPVDVIKERLQVQRSITLAEGSVAGSNHYNGGMDALKKILRTEGLSGIYKGYGATMASFGPFSAIYFSLYEQFKGTTRQYLRRN------STSRDTT--------DPIEMEEIPFPHLVACSATSGAIASWLTSPLDMAKLRLQI 266
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: A0A7S1ZKK9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZKK9_9STRA) HSP 1 Score: 131 bits (330), Expect = 3.630e-35 Identity = 77/149 (51.68%), Postives = 95/149 (63.76%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
C++YVPVDVIKERLQVQ +RG Y GS DAL IM+ EGL GIYKGY ATLASFGPFSALYF+FYEK K +R +R+ + +S+ + ++P +A +A +GALASW T+PLDMAKLRLQV
Sbjct: 56 CVIYVPVDVIKERLQVQ----QRGGF--SQEKYAGSWDALVKIMKNEGLSGIYKGYGATLASFGPFSALYFVFYEKCKYWARQQHRQNQSSVSDNSN--------------AAVDDIPFPYIVACSASSGALASWLTSPLDMAKLRLQV 184
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: A0A7S2LM26_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LM26_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.610e-34 Identity = 76/154 (49.35%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 4 IVYVPVDVIKERLQVQRVVVER------GERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
I+YVPVDV+KER+QVQ E R+ Y GS DAL+ I+RTEG++GIY+GY ATLASFGPFSALYF+FYE+ K S+ + ++ +A++ +G +LP+ +A +AGAGALASW T+PLDMAKLRLQV
Sbjct: 1 IIYVPVDVVKERMQVQSKSRESLISNKDSLRKPQSYHYNGSWDALQQIIRTEGMKGIYRGYWATLASFGPFSALYFVFYERCKVWSKEMLQDNN------------NSDAQRMDDG----DLPLHYLVACSAGAGALASWLTSPLDMAKLRLQV 138
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: A0A835YZW2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW2_9STRA) HSP 1 Score: 127 bits (320), Expect = 5.490e-33 Identity = 78/149 (52.35%), Postives = 95/149 (63.76%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
C++YVPVDV+KERLQ+Q RGE+ AY+GS+ AL+TIMR EGL GIYKGYAATL SFGP+SALYFM YE+AK +R + + P P + E + LP TL +A A A AS+ TNPLDM KLRLQV
Sbjct: 120 CLIYVPVDVVKERLQIQSSA--RGEQ-----AYRGSLHALRTIMRNEGLGGIYKGYAATLLSFGPYSALYFMAYEEAKNVARRMLQ---IPSPPHGTLE-------------PQQALPFTATLCASAAAAAGASFLTNPLDMCKLRLQV 245
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: A0A4D9D4D7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4D7_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.410e-32 Identity = 73/150 (48.67%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKA-GSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
C++YVPVDV+KERLQVQR ++ E Y+G+ AL TI R EGLRG+Y+GY ATL SFGPFSA YF+FYE K G RH++ + + + LP MTLA+AA AGALAS TNP+D+ +LRLQV
Sbjct: 127 CLIYVPVDVVKERLQVQRRLLNGREIPGSLPMYRGTWHALSTIARQEGLRGVYRGYGATLLSFGPFSAFYFVFYETFKGWGLRHLHLD-------------------------KAEALPFHMTLASAASAGALASLITNPMDLVRLRLQV 251
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: A0A5D6XI60_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI60_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.290e-32 Identity = 73/149 (48.99%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
C+++VP+DVIKER+QVQ + ER Y+ ++ A +TIM++E LRG+YKGYAATL SFGPFSALYFMFYEK KA ++ QT++LP + TLA AA AGA AS+ TNPLD+ KLRLQV
Sbjct: 125 CVLWVPIDVIKERMQVQTQGAKGTER----VYYRNTIHAFETIMKSERLRGLYKGYAATLLSFGPFSALYFMFYEKNKALAQEYL---------------------------QTEQLPPLYTLAGAALAGATASFVTNPLDLVKLRLQV 242
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Match: A0A8K1C8S7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8S7_PYTOL) HSP 1 Score: 124 bits (311), Expect = 8.490e-32 Identity = 76/149 (51.01%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 1 CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRGIYKGYAATLASFGPFSALYFMFYEKAKAGSRHVYRETPYPLPVSSSREKIRGEAEQQGEGSQTKELPVMMTLANAAGAGALASWFTNPLDMAKLRLQV 447
C+++VP+DVIKER+QVQ V G G A Y+ +V A++TIM+TE LRG+YKGYAATL SFGPFSALYFMFYEK KA ++ QT++L TL +AA AGA AS+ TNPLDM KLRLQV
Sbjct: 123 CVLWVPIDVIKERMQVQMPV--SGTTSQG-AYYRNTVHAVETIMQTERLRGLYKGYAATLLSFGPFSALYFMFYEKNKATAQKFL---------------------------QTEQLSPQYTLLSAATAGAAASFLTNPLDMIKLRLQV 241 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16318.3621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16318.3621.1 >prot_H-paniculata_contig16318.3621.1 ID=prot_H-paniculata_contig16318.3621.1|Name=mRNA_H-paniculata_contig16318.3621.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp CIVYVPVDVIKERLQVQRVVVERGERRDGPAAYKGSVDALKTIMRTEGLRback to top mRNA from alignment at H-paniculata_contig16318:3227..5637- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16318.3621.1 ID=mRNA_H-paniculata_contig16318.3621.1|Name=mRNA_H-paniculata_contig16318.3621.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2411bp|location=Sequence derived from alignment at H-paniculata_contig16318:3227..5637- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16318:3227..5637- >mRNA_H-paniculata_contig16318.3621.1 ID=mRNA_H-paniculata_contig16318.3621.1|Name=mRNA_H-paniculata_contig16318.3621.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig16318:3227..5637- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |