mRNA_H-paniculata_contig1055.362.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1055.362.1
Unique NamemRNA_H-paniculata_contig1055.362.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: A0A2H4YKI9_9PHAE (Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A2H4YKI9_9PHAE)

HSP 1 Score: 992 bits (2565), Expect = 0.000e+0
Identity = 483/555 (87.03%), Postives = 523/555 (94.23%), Query Frame = 3
Query:  120 LAVMCAGTISSAFVPTSLTSFRGSDSLRWGKRLRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAEAVISGTVPLKEQEA 1784
            +A+  AG ++SAF+P+ +T FRG+DSLR     RNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQR++A  SQ+FVD+PRP+RPLKVAVIGAGLAGLSCAKYLSDAGH+P+VLEARDVLGGKV+AWQDKDGDW+ETGLHIFFGAYPNVN MF ELGI DRLQWKSHSMIFAMPGQQT DGFQRFSRF+FPDLLPAPLNGLVAILLNNEMLTF EKIQFGIGLIPAILFGQKYVEECD LTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD+MLARGGEL MNQRIS+I+LNDDKTVKGL+MQDGS++EADAY+STMPVD++KLMLP+EW+PMPYF KL+GL GVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTC GYRDD+KSMLELVFAPAKDWIGRPD EI+ ATMEELYRLFPNEI +DGS AKLLKSAVVKTPLSVYEATAGRE YRP QTSP+ NFFLAGC+TKQKYLASMEGATFSGKLAA+ALA+A ++GT+PLKE  A
Sbjct:    9 VALALAGNLASAFMPSCVTVFRGADSLRARTHSRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSQAFVDMPRPDRPLKVAVIGAGLAGLSCAKYLSDAGHEPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMNQRISKIMLNDDKTVKGLKMQDGSMVEADAYVSTMPVDILKLMLPDEWKPMPYFDKLNGLEGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGRPDEEIIQATMEELYRLFPNEIMRDGSKAKLLKSAVVKTPLSVYEATAGRELYRPVQTSPLANFFLAGCFTKQKYLASMEGATFSGKLAARALADAAMAGTIPLKETAA 563          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: A0A2H4YKJ4_SACJA (Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepID=A0A2H4YKJ4_SACJA)

HSP 1 Score: 987 bits (2551), Expect = 0.000e+0
Identity = 485/568 (85.39%), Postives = 524/568 (92.25%), Query Frame = 3
Query:   93 MAGVHAVAVLAVMCAGTISSAFVPTSLTSFRGSDSLRWGKRLRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAEAVISGTVPLKEQEAAVLA 1796
            M GV   A + +M AG ++ AFVP+SLT FRG+  L  G++ +  V SMIFDYPAPGVRKDYPRPPLEETSQNQR++A  SQ+F+D+PRPERPLKVAVIGAGLAGLSCAKYLSDAGH+PIVLEARDVLGGKV+AWQDKDGDW+ETGLHIFFGAYPNVN MF ELGI DRLQWKSHSMIFAMPGQQT DGFQRFSRF+FPDLLPAPLNGLVAILLNNEMLTF EKIQFGIGLIPAILFGQKYVEECD LTVTEWM KQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD+MLARGGEL M QRISQ+LLNDDKTVKGL+MQDGS + ADAY+STMPVD++KLMLP+EWRPMPYF+KL+GL GVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTC GYRDDEKSMLELVFAPAKDWIGRPD  I++ATMEELYRLFPNE+ KDGSGA+LLKSAVVKTPLSVYEATAGRE YRP QTSPI NFFLAGC+TKQKYLASMEGATFSGKLAA+ALA+A  +GT+PLKE  +A+ A
Sbjct:    1 MMGVRGDAFVLLMLAGKMALAFVPSSLTVFRGTAPLVVGRQSKTSVPSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSQTFIDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHEPIVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMAKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISQVLLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLMLPDEWRPMPYFEKLNGLTGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDEKSMLELVFAPAKDWIGRPDEAIIEATMEELYRLFPNELNKDGSGAQLLKSAVVKTPLSVYEATAGRELYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAAAGTIPLKEAASAMAA 568          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: A0A2H4YKK3_9PHAE (Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A0A2H4YKK3_9PHAE)

HSP 1 Score: 971 bits (2509), Expect = 0.000e+0
Identity = 477/557 (85.64%), Postives = 514/557 (92.28%), Query Frame = 3
Query:  135 AGTISSAFVPTSL--TSFRGSDSLRWGKRLRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAEAVISGTVPLKEQEAAVLAA 1799
            AG + SAFVP +   T   GS  LR     R+G  SMIFDYPAPGVRKDYPRPPLE+TSQNQREAA  SQ+F+++PRP RPLKVAVIGAGLAGLSCAKYLSDAGH P+VLEARDVLGGKV+AWQDKDGDW+ETGLHIFFGAYPNVN MF ELGI DRLQWKSHSMIFAMPGQQT DGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTF EKIQFGIGLIPAILFGQKYVEECD LTVTEWM KQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD+M+ARGGEL MNQRIS ILLNDDKTV+GL+MQDGS++EADAY+STMPVD++KLMLPEEWRP+PYF+KL GL GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMSLTC GYRDD+KSMLELVFAPAKDWIGR D +I+DATM ELYRLFPNE+A+DGSGAKLLK AVVKTPLSVYEATAGRE YRP QTSPI NFFLAGC+TKQKYLASMEGATFSGKLAA+ALA+A I+GT+PLKE+E++ +AA
Sbjct:   14 AGNLVSAFVPITFVGTGSAGSSRLRG----RSGALSMIFDYPAPGVRKDYPRPPLEDTSQNQREAAAFSQTFINMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHNPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMTKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMIARGGELRMNQRISSILLNDDKTVRGLKMQDGSMVEADAYVSTMPVDVLKLMLPEEWRPIPYFEKLSGLTGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGRSDEDIIDATMGELYRLFPNELARDGSGAKLLKYAVVKTPLSVYEATAGREMYRPEQTSPIPNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIAGTIPLKEKESSAVAA 566          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: A0A2H4YKJ3_9PHAE (Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A2H4YKJ3_9PHAE)

HSP 1 Score: 966 bits (2497), Expect = 0.000e+0
Identity = 477/568 (83.98%), Postives = 521/568 (91.73%), Query Frame = 3
Query:   93 MAGVHAVAVLAVMCAGTISSAFVPTSLTSFRGSDSLRWGKRLRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAEAVISGTVPLKEQEAAVLA 1796
            MA      ++A+   GT+ + FV +S T  +G+     G R RNGV+SMIFDYPAPGVRKDYPRPPLEETSQNQR++A  S+SF++LPRPERPLKVAVIGAGLAGLSCAKYLSDAGH+P+VLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVN MFKEL IEDRLQWKSHSMIFAMPGQ+T +GFQRFSRF+F DLLPAPLNGLVAILLN EMLT  EKIQFGIGLIPAILFGQKYVEECD LTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDP NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLA+GGEL  NQR++ ILLN D+TVKGLQM+DGSL+EADAY+STMPVD++KLMLP++WRPMPYF+KL+GL+GVPVINIHMWFD+KLTTVDHLLFSRSPLLSVYADMSLTC GYRDDEKSMLELVFAPAK+WIGRPD +I+DATM ELYRLFPNEI+KDGSGAKLLK AVVKTPLSVYEATAGRE YRP QT+PI+NFFLAGC+TKQKYLASMEGATFSGKLAAKALAEA I+GTVPL E+ AA+ A
Sbjct:    1 MARACVYTLIALTSTGTLCNGFVSSSTTLRKGTAPPGAGARSRNGVTSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSRSFLELPRPERPLKVAVIGAGLAGLSCAKYLSDAGHQPLVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQKTAEGFQRFSRFEFTDLLPAPLNGLVAILLNTEMLTLTEKIQFGIGLIPAILFGQKYVEECDCLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPGNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLAKGGELRTNQRVATILLNGDQTVKGLQMRDGSLVEADAYVSTMPVDVLKLMLPDQWRPMPYFEKLNGLSGVPVINIHMWFDKKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDEKSMLELVFAPAKEWIGRPDEDIIDATMGELYRLFPNEISKDGSGAKLLKYAVVKTPLSVYEATAGREAYRPVQTTPIRNFFLAGCFTKQKYLASMEGATFSGKLAAKALAEAAIAGTVPLVERAAALAA 568          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: D8LPN3_ECTSI (Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepID=D8LPN3_ECTSI)

HSP 1 Score: 961 bits (2484), Expect = 0.000e+0
Identity = 477/571 (83.54%), Postives = 517/571 (90.54%), Query Frame = 3
Query:   93 MAGVHAVAVLAVMCAGTISSAFVPTSLTSFRG---SDSLRWGKRLRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAEAVISGTVPLKEQEAAVLA 1796
            M G    A LA+  AG   SAFV    TSF G   S S R     RNGVSSMIFD+PAPG RKDYPRPPLEETS+NQRE+A  SQ+F+D+PRPERPLKVAVIGAGLAGLSCAKYLSDAGHKP+VLEARDVLGGKV+AWQDKDGDWVETGLHIFFGAYPNVN MF ELGI DRLQWKSHSMIFAMPGQQT DGFQRFSRF+FP LLPAPLNGLVAILLNNEMLTF EKIQFGIGL+PAILFGQKYVEECD LTV++WMKKQGVPDRVNDEVFIAMAKALNFIDP+NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD+MLARGGEL M QRIS+ILLNDDKTVKGL+MQDGS + ADAY+STMPVD++KL LPE WRPMPYF+KL+GL GVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTC GYRDD+KSMLELVFAPAKDWIG+ D +I++ATM ELYRLFPNE++KDGSGAKLLKSAVVKTPLSVYEATAGRE YRP QT+P+ NFFLAGC+TKQKYLASMEGATFSGKLAA+AL +A I+GTVPL+++ +AV A
Sbjct:    1 MVGAGGGAFLALALAGKTISAFVLPPATSFTGVGLSGSARQSAIRRNGVSSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFLDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPVVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDILKLALPEAWRPMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGKSDEDIIEATMGELYRLFPNELSKDGSGAKLLKSAVVKTPLSVYEATAGRELYRPVQTTPVSNFFLAGCFTKQKYLASMEGATFSGKLAARALCDAAIAGTVPLQKESSAVAA 571          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: A0A2H4YKJ7_9PHAE (Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A2H4YKJ7_9PHAE)

HSP 1 Score: 955 bits (2469), Expect = 0.000e+0
Identity = 473/555 (85.23%), Postives = 512/555 (92.25%), Query Frame = 3
Query:  144 ISSAFVPTS----LTSFRGSDSLRWGKRLRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAEAVISGTVPLKEQEAAVLA 1796
            ++SAFVP +    +   R S   R   R  +GVSSMIFDYP  GVRKDYPRPPLEETSQNQR+AA  SQ+  DLPR ERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVN MFKEL IEDRLQWKSHSMIFAMPGQQT+DGFQRFSRFDFP LLPAPLNGLVAILLNN+ML+F EK+QFGIGLIPAILFGQ+YVEECD+LTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGEL M QRIS+IL++DDKTVKGLQMQDGS++EADAY+STMPVD +KLMLPEEW+ +PYF+KL+GL GVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTC GYRDD+KSMLELVFAPAK+WIGRPDSEI++ATMEELYRLFPNE+ +DGSGA+L+K AVVKTPLSVYEATAGRE YRP QTSPI NFFLAGC+TKQKYLASMEGATFSGKLAAKALA+A ++ TVPLK+ +AA+ A
Sbjct:   18 LTSAFVPLNPRAGIDVVRRSAVARTRARRADGVSSMIFDYPPQGVRKDYPRPPLEETSQNQRDAASFSQAIADLPRTERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQQTEDGFQRFSRFDFPALLPAPLNGLVAILLNNDMLSFPEKLQFGIGLIPAILFGQRYVEECDELTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELRMKQRISKILVHDDKTVKGLQMQDGSIVEADAYVSTMPVDPLKLMLPEEWKQLPYFQKLEGLRGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKEWIGRPDSEIIEATMEELYRLFPNEMNRDGSGARLVKVAVVKTPLSVYEATAGRELYRPVQTSPIPNFFLAGCFTKQKYLASMEGATFSGKLAAKALADAALAETVPLKDGQAAMAA 572          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: A0A835Z8Q9_9STRA (15-cis-phytoene desaturase, chloroplastic/chromoplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q9_9STRA)

HSP 1 Score: 853 bits (2203), Expect = 4.980e-305
Identity = 414/519 (79.77%), Postives = 466/519 (89.79%), Query Frame = 3
Query:  246 DYPAPGVRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAEAVISGTVPLKEQE--AAVLA 1796
            DYPAPGVR+D+PRPPLEETS+NQR +A+LS+    LPRPE+PLKVA+IGAGLAGLS AKYL+DAGH+P + E+RDVLGGKVSAWQD DGDWVETGLHIFFGAYPNVN MFKELGIEDRLQWKSHSMIFAMPGQQT +GFQRFSRF+FP  LPAP+NG+ AIL+NNEMLT+ EKI+FGIGL+PAILFGQ YVEECD L+V+EWM+KQGVP+RVN+EVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADY+  RGG +++ +R+S+I LNDD TVK L++Q G  +EAD Y+S MPVD +KLMLPE WRP+PYFK LDGL GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADM+LTC+GYRDDEKSMLELVFAPAKDWIGRPD EI+ ATM+EL  LFPNEI+ DGS AKLLKS VVKTPLSVYEAT GRE +RP QTSPI NFFLAGC+TKQKYLASMEGATFSGKL A+A+AEA ++G V  +  E  AAV+A
Sbjct:   14 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRVKARAPEPAAAVVA 532          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: Q5UAX3_HAELA (Phytoene dehydrogenase n=4 Tax=Haematococcus lacustris TaxID=44745 RepID=Q5UAX3_HAELA)

HSP 1 Score: 718 bits (1854), Expect = 1.760e-251
Identity = 350/493 (70.99%), Postives = 410/493 (83.16%), Query Frame = 3
Query:  264 VRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAE 1742
            V KDYP P  + +S   +EA  LS    + PRP +PL+V + GAGLAGLS AKYL+DAGH P+VLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPN+ ++FKELGI+DRLQWK HSMIFAMP     D    FSRFDFP+L PAP NG++AIL NN+ML++ EKI+F IGL+PAI+FGQ+Y EE D+LTVTEWM+KQGVPDRVN+EVFIAMAKALNFI+PD+LSMTVVLTALNRFLQE HGSKMAFLDG PP RLCQPM DY  ARGG+LM N R+ QI+LNDDK+VK L + +G  +E D YIS MPVD+MK+++P+ W  MPYFK+L+GL GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMS TC  Y D++KSMLELVFAPAK+WIGRPD EI+ ATM EL RLFP E+  D S AK+LK  VVKTPLSVY++TAGRE++RP+Q SPI NF+LAG YTKQKYLASMEGA FSGKL  +A+ E
Sbjct:   38 VAKDYPTPDFQ-SSDTYQEALSLSTKLRNAPRPAKPLRVVIAGAGLAGLSAAKYLADAGHHPVVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFKELGIQDRLQWKEHSMIFAMP-----DAPGEFSRFDFPEL-PAPWNGIIAILRNNQMLSWPEKIRFAIGLLPAIIFGQRYCEEQDELTVTEWMRKQGVPDRVNEEVFIAMAKALNFINPDDLSMTVVLTALNRFLQEQHGSKMAFLDGAPPERLCQPMVDYFKARGGDLMFNSRVKQIVLNDDKSVKHLALTNGQTVEGDLYISAMPVDIMKILMPDPWASMPYFKQLNGLEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYADEKKSMLELVFAPAKEWIGRPDEEIIAATMTELERLFPTEVRADQSMAKILKYKVVKTPLSVYKSTAGREKFRPTQRSPISNFYLAGDYTKQKYLASMEGAVFSGKLVTEAIVE 523          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: A0A250XPT4_9CHLO (Phytoene dehydrogenase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XPT4_9CHLO)

HSP 1 Score: 709 bits (1831), Expect = 3.880e-248
Identity = 353/491 (71.89%), Postives = 405/491 (82.48%), Query Frame = 3
Query:  270 KDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAE 1742
            KDYP P  ++ ++  +EAA LS      PRP +PLKV + GAGLAGLS AKYLSDAGH PIVLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPN+ ++F ELGI +RLQWK HSMIFAMP    +     FSRFDFP+L PAP NG++AIL NN+ML++ EKIQF IGL+PAI+FGQKYVEE D+LTVT+WM+KQGVPDRVNDEVFIAMAKALNFI+PD LSMTVVLTALNRFLQE HGSKMAFLDG PP RLCQPM DY  ARGG++MMN R+  I+LN D +VK   + +G  +E D Y+S MPVD++KL++PE W+ M YFK+LDGL GVPVINIH+WFDRKLTTVDHLLFSRS LLSVYADMS TC  Y D EKSMLELVFAPAKDWIGRPD EI+ ATM+EL RLFP EIA DGS A + K  V+KTPLSVY++TAGRE  RPSQ SPIKNF+LAG YTKQKYLASMEGA FSGKLAA+AL +
Sbjct:   32 KDYPTPDFKD-AETFKEAAALSAKLRSYPRPAKPLKVVIAGAGLAGLSAAKYLSDAGHIPIVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNVFAELGISNRLQWKEHSMIFAMPNLPGE-----FSRFDFPEL-PAPWNGIIAILRNNQMLSWPEKIQFAIGLLPAIIFGQKYVEEQDELTVTQWMRKQGVPDRVNDEVFIAMAKALNFINPDELSMTVVLTALNRFLQEQHGSKMAFLDGAPPERLCQPMVDYFTARGGQIMMNARVKDIVLNPDGSVKHYALTNGQTVEGDFYMSAMPVDIVKLLVPEPWKKMNYFKQLDGLEGVPVINIHIWFDRKLTTVDHLLFSRSSLLSVYADMSTTCKEYFDTEKSMLELVFAPAKDWIGRPDEEIIAATMKELERLFPTEIAADGSKAAIRKYKVIKTPLSVYKSTAGREACRPSQRSPIKNFYLAGDYTKQKYLASMEGAVFSGKLAAEALVD 515          
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Match: A0A383V3D0_TETOB (Phytoene dehydrogenase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V3D0_TETOB)

HSP 1 Score: 709 bits (1829), Expect = 6.510e-248
Identity = 361/521 (69.29%), Postives = 412/521 (79.08%), Query Frame = 3
Query:  207 GKRLRNGVSSMIFDYPAPGVRK-------DYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGLQMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPAKDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYEATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAEAV 1748
            G  +R   SS +   P  G RK       DYP+P  E T+   +EA  LS    + PRPE+PLKV +IGAGLAGLS AKYLSDAGH PIVLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPN+ ++FKEL IE+RLQWK HSMIFAMP     D    FSRFDFPD+ PAP NG+ AIL NN+MLT+ EKIQF +GL+PAI+ GQKYVE+ D LTVTEWM++QGVP+RVNDEVFIAMAKALNFIDPD+LSMTVVLTALNRFLQE HGSKMAFLDG PP RLCQP+ DY  A+GG++ MN R+ +I LN D +VK L M +G  +E D Y+S MPVD+MKL+ PE W  MPYF +L+GL GVPVINIH+WFD+K  TVDHLLFSRSPLLSVYADMS+TC  Y D  KSMLELVFAPA+ WIGRPD EI+ ATM EL RLFP EIA D S AK+LK  VVKTPLSVY+ATAGRE YRP+Q SPI NF+LAG YTKQKYLASMEGA FSGKLAA+AL E V
Sbjct:   22 GVSMRLASSSSVAARPVRGSRKQLSVVARDYPKPAFE-TAGTFQEAQALSDKLRNAPRPEKPLKVVIIGAGLAGLSTAKYLSDAGHIPIVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNLMNVFKELNIEERLQWKEHSMIFAMP-----DSPGEFSRFDFPDI-PAPFNGIFAILANNQMLTWPEKIQFALGLLPAIVGGQKYVEDQDKLTVTEWMRQQGVPNRVNDEVFIAMAKALNFIDPDDLSMTVVLTALNRFLQEKHGSKMAFLDGAPPERLCQPLVDYFTAKGGQIRMNARLKEIKLNADGSVKELAMVNGETIEGDLYVSAMPVDIMKLLTPEPWAAMPYFSQLNGLEGVPVINIHIWFDQKFKTVDHLLFSRSPLLSVYADMSVTCKEYADPNKSMLELVFAPAEGWIGRPDEEIIAATMTELERLFPTEIAADQSKAKILKYKVVKTPLSVYKATAGREEYRPTQRSPISNFYLAGDYTKQKYLASMEGAIFSGKLAAEALVEDV 535          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1055.362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H4YKI9_9PHAE0.000e+087.03Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62... [more]
A0A2H4YKJ4_SACJA0.000e+085.39Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepI... [more]
A0A2H4YKK3_9PHAE0.000e+085.64Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A... [more]
A0A2H4YKJ3_9PHAE0.000e+083.98Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=... [more]
D8LPN3_ECTSI0.000e+083.54Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A2H4YKJ7_9PHAE0.000e+085.23Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772... [more]
A0A835Z8Q9_9STRA4.980e-30579.7715-cis-phytoene desaturase, chloroplastic/chromopl... [more]
Q5UAX3_HAELA1.760e-25170.99Phytoene dehydrogenase n=4 Tax=Haematococcus lacus... [more]
A0A250XPT4_9CHLO3.880e-24871.89Phytoene dehydrogenase n=1 Tax=Chlamydomonas eusti... [more]
A0A383V3D0_TETOB6.510e-24869.29Phytoene dehydrogenase n=2 Tax=Scenedesmaceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1055contigH-paniculata_contig1055:857..6199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score963.8
Seed ortholog evalue3.6e-278
Seed eggNOG ortholog2880.D8LPN3
Preferred namePDS1
KEGG rclassRC01214,RC01958,RC03092,RC03093
KEGG koko:K02293
KEGG ReactionR04786,R04787,R07510,R09652,R09653,R09654
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00097
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009526,GO:0009534,GO:0009536,GO:0009579,GO:0009941,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016166,GO:0016491,GO:0016627,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0055114,GO:0071704,GO:1901576
EggNOG free text desc.oxidoreductase activity
EggNOG OGsCOG1231@1,KOG0029@2759
Ec32 ortholog descriptionPhytoene desaturase, chloroplast precursor
Ec32 orthologEc-18_001850.1
EC1.3.5.5
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons9
Model size2324
Cds size1710
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928758.0880048-UTR-H-paniculata_contig1055:856..13781622928758.0880048-UTR-H-paniculata_contig1055:856..1378Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1055 857..1378 -
1691480608.1503668-UTR-H-paniculata_contig1055:856..13781691480608.1503668-UTR-H-paniculata_contig1055:856..1378Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1055 857..1378 -
1622928758.2576947-UTR-H-paniculata_contig1055:6107..61991622928758.2576947-UTR-H-paniculata_contig1055:6107..6199Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1055 6108..6199 -
1691480608.251949-UTR-H-paniculata_contig1055:6107..61991691480608.251949-UTR-H-paniculata_contig1055:6107..6199Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1055 6108..6199 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928758.1085658-CDS-H-paniculata_contig1055:1378..14201622928758.1085658-CDS-H-paniculata_contig1055:1378..1420Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 1379..1420 -
1691480608.1629727-CDS-H-paniculata_contig1055:1378..14201691480608.1629727-CDS-H-paniculata_contig1055:1378..1420Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 1379..1420 -
1622928758.1211436-CDS-H-paniculata_contig1055:1688..19281622928758.1211436-CDS-H-paniculata_contig1055:1688..1928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 1689..1928 -
1691480608.1748931-CDS-H-paniculata_contig1055:1688..19281691480608.1748931-CDS-H-paniculata_contig1055:1688..1928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 1689..1928 -
1622928758.1316426-CDS-H-paniculata_contig1055:2834..30091622928758.1316426-CDS-H-paniculata_contig1055:2834..3009Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 2835..3009 -
1691480608.1832533-CDS-H-paniculata_contig1055:2834..30091691480608.1832533-CDS-H-paniculata_contig1055:2834..3009Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 2835..3009 -
1622928758.1509695-CDS-H-paniculata_contig1055:3538..37531622928758.1509695-CDS-H-paniculata_contig1055:3538..3753Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 3539..3753 -
1691480608.1916826-CDS-H-paniculata_contig1055:3538..37531691480608.1916826-CDS-H-paniculata_contig1055:3538..3753Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 3539..3753 -
1622928758.1767237-CDS-H-paniculata_contig1055:4042..41891622928758.1767237-CDS-H-paniculata_contig1055:4042..4189Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 4043..4189 -
1691480608.2006924-CDS-H-paniculata_contig1055:4042..41891691480608.2006924-CDS-H-paniculata_contig1055:4042..4189Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 4043..4189 -
1622928758.1983263-CDS-H-paniculata_contig1055:4579..48081622928758.1983263-CDS-H-paniculata_contig1055:4579..4808Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 4580..4808 -
1691480608.212214-CDS-H-paniculata_contig1055:4579..48081691480608.212214-CDS-H-paniculata_contig1055:4579..4808Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 4580..4808 -
1622928758.2203882-CDS-H-paniculata_contig1055:5039..53321622928758.2203882-CDS-H-paniculata_contig1055:5039..5332Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 5040..5332 -
1691480608.2230442-CDS-H-paniculata_contig1055:5039..53321691480608.2230442-CDS-H-paniculata_contig1055:5039..5332Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 5040..5332 -
1622928758.2344303-CDS-H-paniculata_contig1055:5528..58101622928758.2344303-CDS-H-paniculata_contig1055:5528..5810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 5529..5810 -
1691480608.2321663-CDS-H-paniculata_contig1055:5528..58101691480608.2321663-CDS-H-paniculata_contig1055:5528..5810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 5529..5810 -
1622928758.2468576-CDS-H-paniculata_contig1055:6020..61071622928758.2468576-CDS-H-paniculata_contig1055:6020..6107Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 6021..6107 -
1691480608.241367-CDS-H-paniculata_contig1055:6020..61071691480608.241367-CDS-H-paniculata_contig1055:6020..6107Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1055 6021..6107 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1055.362.1prot_H-paniculata_contig1055.362.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1055 1379..6107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1055.362.1

>prot_H-paniculata_contig1055.362.1 ID=prot_H-paniculata_contig1055.362.1|Name=mRNA_H-paniculata_contig1055.362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=570bp
MAGVHAVAVLAVMCAGTISSAFVPTSLTSFRGSDSLRWGKRLRNGVSSMI
FDYPAPGVRKDYPRPPLEETSQNQREAAELSQSFVDLPRPERPLKVAVIG
AGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIF
FGAYPNVNSMFKELGIEDRLQWKSHSMIFAMPGQQTDDGFQRFSRFDFPD
LLPAPLNGLVAILLNNEMLTFLEKIQFGIGLIPAILFGQKYVEECDDLTV
TEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETH
GSKMAFLDGPPPTRLCQPMADYMLARGGELMMNQRISQILLNDDKTVKGL
QMQDGSLMEADAYISTMPVDLMKLMLPEEWRPMPYFKKLDGLAGVPVINI
HMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCDGYRDDEKSMLELVFAPA
KDWIGRPDSEIVDATMEELYRLFPNEIAKDGSGAKLLKSAVVKTPLSVYE
ATAGRERYRPSQTSPIKNFFLAGCYTKQKYLASMEGATFSGKLAAKALAE
AVISGTVPLKEQEAAVLAA*
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mRNA from alignment at H-paniculata_contig1055:857..6199-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1055.362.1 ID=mRNA_H-paniculata_contig1055.362.1|Name=mRNA_H-paniculata_contig1055.362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5343bp|location=Sequence derived from alignment at H-paniculata_contig1055:857..6199- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TATGTCATCCGTTGTGACCCCCATCCTGCATCCGACGTGGCTGACTGAGA TAGAGTTGCTGAGTGATTCATCACGGTGTCTGCATCAACACAATGGCGGG AGTACATGCAGTTGCCGTGTTGGCAGTGATGTGTGCAGGAACTATTTCGT CGGCATTCGTGCCAACCTCACTGACGTCGGTGAGTCATGCGCGACGCGGT AAATGTAGGCACGTGTGGGCTGGAGGACTTTGCTCTCTTCTGTATCGCGC GGTTCGCGTCCGTGCACAGTCAATTATACAAACTTTCCCTTTCTGGGACT CCGGGTACTCTAACGTGCCCACTAAACCACGCTCACAATGTTGCTGCTCC TTGCTGGTCTGTGTTTCTCTCGGCTGTATCCCTATCTAGTTCCGAGGATC CGATTCCTTGCGGTGGGGAAAACGTTTGAGGAATGGCGTTTCGTCCATGA TATTCGACTACCCGGCCCCAGGAGTGCGGAAAGACTACCCTCGCCCGCCG CTGGAGGAGACTTCACAGAACCAGCGAGAGGCCGCGGAACTGTCACAATC CTTTGTCGATCTCCCTCGGCCCGAGCGGCCACTAAAAGTTGCCGTCATTG GAGCGGGACTCGCAGGACTATCTTGCGCCAAATATTTGTCAGATGCAGGC CACAAGCCAATTGTCCTAGAGGTGAGCCTATTGAACCGAACATACTTGCG CATGATGTCGATTGACCGACGGTGGATCTTGTGGATTGGTTGTACGATGG GCAAAAGCTCTCGCTGAAGCCAAGCGATAGATACGTCCGACCTCTTGTTC ACATTCTTCGTCATACTCAATGTTACTTCACGGCTTCCACATATTTCTTT CTAATGGTGGTGCGCAGGCTCGAGATGTTTTGGGAGGCAAGGTATCTGCG TGGCAAGACAAGGACGGCGACTGGGTTGAAACGGGGCTACATATTTTCTT CGGCGCGTACCCGAACGTCAACAGCATGTTCAAGGAACTGGGTATTGAGG ATCGACTTCAGTGGAAATCACACAGCATGATTTTTGCCATGCCTGGGCAG CAGACGGACGACGGATTTCAGCGGTTCTCGCGCTTCGATTTCCCGGATCT TTTGCCAGCTCCGCTCAACGGTTTGGTCGCCATCCTCCTGAATAACGAGA TGCTCACCTTGTAAGCCTGCACCCTGATACCAACACAGCCTTTGTGCTCA TGTTTTGTTATCTCTACTAAACGTGGCAAATGACAAGTTTCTATTTAGCA CAGTCATGGTTTCATGCAGGGTGCATTTTTCTCGCTGTGTGGTAGTACAT TGCGACCGTCTAATGCTATCTTACATATTGTATCTTCTCGATTTCATGGC ATGTCCTCACATTCGACTCTTCTGCTGTTCTATTGCGGCAGCCTGGAGAA GATCCAGTTTGGCATCGGACTTATCCCAGCCATTCTTTTCGGTCAAAAGT ACGTCGAAGAGTGCGATGACCTGACTGTAACGGAATGGATGAAAAAACAG GGAGTGCCTGATCGAGTGAACGACGAGGTTTTCATTGCCATGGCCAAGGC CCTCAACTTTATAGACCCTGACAACTTGTCCATGACGGTGGTTTTGACGG CCCTCAACCGATTTCTTCAGGTACGTACCCGCCAAGATTGTGATGGAATT GGTGTGTCCGATGGTTTCGCGTGCTGGTGGATCTGTGTTGTTTTGTTGCG TTTTTCTCAACCTCGCTTATTTTTGCTTCGGTGTGTCCGATGCGTCCACT CAAACATGGTCGATCCACTTTTTGAATCGTGAAATGTGACGCGTGAGTCG AAGGCCTTATGAATTCCCTCCAATCGGGAACTAAAGGGCGTGATTGCATT AAAAATCGTCAGCTGTTCCACCCATCATGTCGTGGGATACTCTTTGCAGA CATTTACACAAACTAGCTGCACCACCATGTCAATTCTATATATGATCCCT CGATGAACCAGTCACCAATCAAACCGTCAACTATTTTCCATCACACGTGA TATGTATCAGGAGACACACGGATCGAAGATGGCTTTCTTAGACGGCCCGC CTCCTACTCGATTGTGTCAACCGATGGCAGACTACATGCTTGCCCGCGGC GGAGAGCTGATGATGAACCAGCGTATTTCCCAGATCCTCCTGAACGATGA CAAAACGGTGTGTAACGTCGCGAGTCGAGATAACTGTGTTATTATGCACC TGTCCCCTCAGAGCCACCATTTCGCCATGATGTTGACGGGGGTTATTCGA ACTATACTGCCCGGAGGCTCAACTTGTTGCGTATTTGGGGAATTGGCGTG GGATGTGAGCTGTACTGAAGTCAAAATCCTGGTGTAACCATCATAAGAGT CCTCAATTTCCTATGATGAAACTGACTTCGCTGCGTCGTTAACCATGACG ATATTTTTAACTTTATTGTACTTTGTTGTTCCTCATTTGACCCCAGGTAA AGGGTTTGCAAATGCAGGATGGCTCATTGATGGAGGCAGACGCGTACATA TCAACTATGCCGGTCGACTTGATGAAGCTTATGTTGCCCGAAGAGTGGCG ACCTATGCCATATTTCAAGAAGTTAGACGGACTTGCGGGTGTGCCCGTCA TCAACATTCACATGTGGTTTGACAGAAAGTTGACTACTGTGGACCATCTT CTGTTTTCTCGGTAAGTGTCCCATATTTCTACATGATCGTTGACAACATT TGTTGTCTACAAATCCTTGGTGAAGTCGAACATAATGCAACAGTTCCATT TCATCAAAATCATTCCGCCTCCTCGGGTATGACTTTTGAAATAACAAGCG AGCACGTTGAACCACTGCTCGCTAGCCCGTCTTTATCTCATAGCGTCGTG AGCATGAGTTATGTGAGGCATTTGGACTTCTTACAATGTCATCGACGCCT GCCATACCGTTGCTCTGTTTGCCTCGGTGCCTAGCATGTATTTTTTATTT TATTATTGAAATTGTACTCTTCGTATAGTTCAGGATGTCTCGACGAATAA TAAGTCTGTGCAGCCCCGCCAAATAGATATCGTAATTATATCTCGCGTGA TTAAATCAAGGTAGAATTGGACTTTGTAAATTGTCATGATGTACTGGTAG TTTGCTGTTGAGAAAGCTAAACAACATGTCGAGACGAGTCATGTAAACAC TATTGTCGTTCCCTTCCGATTCCATGATTGTACGCCCTAGGTCTCCCCTA CTCTCTGTGTACGCGGATATGTCCCTCACTTGCGATGGTTACCGTGACGA CGAAAAATCGATGTTGGAGCTGGTGTTTGCTCCTGCGAAGGATTGGATCG GCCGACCGGACTCAGAAATCGTCGACGCAACGATGGAGGAGCTGTACCGA CTCTTCCCCAACGAGGTCGGTGGTGGTACCGTCGTGTAGGCTAGCACTTA GGATCCTGTAACGAAACATCATATGGTGAAACAACCTAATGTGCAAGTTC ACTTGGAATGGCCAAGCTGACATAGACCTTTGTCGTGTGGCTTCACCACA CATGATTCCGACGGTTGAACATGTCGATCTTCAGCTAATTATATATTGTT TGTTTATTAGTCAGGCCGAGCCTTACTGAGAGCAAAAAACGATTCCCACC AAATCGATTTGGCCTTACTCAGCCACACCCACCAGCCTTGGTTTAACGGA AATTCAATATGTATTAAACGAGGTAGAGTAGTTTATGTACACTTGCGACT ACTAAAAAGTGCCGATTTTGGACGGTGTGTGTACGGGGCAGTTGGTTACC CACGAAACACACGTGTTCTTGTTAATTTGTGAATGGTGCTACCCAAACCA ACTACTCACGGACCAGTGAACGAAGAGTTACGGTCTGTACTATGGTTCGC TATACCTGGGAGAGTGACGGGTACAATCGCTGTGCTGCGTTTTTTGTCAC GCGTTGCATTCCACCGCCTTTGGCTGACACTGGCCGCTTGGTCGACACGA AGGACAGCCATGGACATTTCCCACATAATATCTGCCCCCTTTGAATCACT ATTTTGCTTTCCCTGAAGAATAGAGTAGGTGCCCACCAACGACCAAATCT GATTTGAGAATCTTGTTCACTTTCCGACAGATCCATGTAGATTCGATTTT CTTGGCGCCGTGAAAGTGTTACCAGGAGCGACCAATGTTCGGATCACGTT TTTGACCGATCACAAGCCCTTCAGCCAGAAATGAATTTTTGGCAAGTATT TTGACAATGGCCTTTTTCTCTCGTTAAGACACGACCTCACCAAATGACAT TCTCATTTTGCGAGGGAGCAGATCGCCAAGGACGGCTCAGGTGCAAAGTT GCTCAAGTCTGCCGTGGTGAAAACTCCTCTTTCGGTGTATGAGGCGACAG CAGGACGTGAGCGTTACCGCCCTTCCCAGACCTCTCCGATCAAGAATTTC TTCTTGGCGGGATGCTATACAAAGCAAAAGTACTTGGCTAGTATGGAAGG GGCTACTTTCTCCGGAAAGTTGGCTGCTAAGGCTCTCGCTGAAGCTGTGA TCTCCGGAACGGTAAGAGATCTCACTACCCTCACGCTTATATGCTCCAAT GCGTGTGTATTCGAAATCGTATACAGAGTGCGCCATCTTTTGCCCTCAGA GTTTCCATGACATGCTAAGGAGATGTTGTGGGTTTCAATCCGTTGCCCAC GTTTCATACAGAACGAGTGCTTTTTCTCGGATCCATACTGTGCGTTTCAG CTACACGTTTCAGAACTTCATCGGCTTGATTTACTTAATAAAATCCATGT GATATCTCGTATTCGATGGCCGTCTACAGGTACCCTTGAAGGAGCAGGAA GCCGCTGTTTTAGCAGCATAATTCGTGCTGGAGGGATAAGTCCATCAGGC GATCGTACCTCTTCGGCATCGATTTTTTGCTGATACTGAGCATATGGTCC TGGGGAGATTGCAGGCCCTTCAGGGTAAAGCGTTGTCTGGCTCAAGTGCT ATGACTCATGTTTGCTGCGGGGGCGGTATCTTGACCTGGCACTTTGGACA ATTCGAAACCATTGAAGGTGTAAACTGAGATAGAAAACACTCCACAGTAG ATATTTACACAAAGTCCGATATGAAATAAACAGCCTACAAAGGAAAAAAG CTTTTTTCTCGGGCAAATAAATTAGAACAGTGGACTGGAAAAGGCATGTA TATGTCATTTTTGGATATCTTCGGGTGGAAATATATGGCAACGTTTGCGC AGGGTTTATTATAAGATTGTAAACGATTTAAAATTCCCTATTTTTTGCTG AGTGCACTTCATATCGGGACTTTCCTTCTAGGTGAAATTTGTCGGGGGGC ACATTCGCAAGAAATGAGAAAAAAACGAAGAAACATAACGCGC
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Coding sequence (CDS) from alignment at H-paniculata_contig1055:857..6199-

>mRNA_H-paniculata_contig1055.362.1 ID=mRNA_H-paniculata_contig1055.362.1|Name=mRNA_H-paniculata_contig1055.362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3420bp|location=Sequence derived from alignment at H-paniculata_contig1055:857..6199- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGGAGTACATGCAGTTGCCGTGTTGGCAGTGATGTGTGCAGGAAC
TATTTCGTCGGCATTCGTGCCAACCTCACTGACGTCGATGGCGGGAGTAC
ATGCAGTTGCCGTGTTGGCAGTGATGTGTGCAGGAACTATTTCGTCGGCA
TTCGTGCCAACCTCACTGACGTCGTTCCGAGGATCCGATTCCTTGCGGTG
GGGAAAACGTTTGAGGAATGGCGTTTCGTCCATGATATTCGACTACCCGG
CCCCAGGAGTGCGGAAAGACTACCCTCGCCCGCCGCTGGAGGAGACTTCA
CAGAACCAGCGAGAGGCCGCGGAACTGTCACAATCCTTTGTCGATCTCCC
TCGGCCCGAGCGGCCACTAAAAGTTGCCGTCATTGGAGCGGGACTCGCAG
GACTATCTTGCGCCAAATATTTGTCAGATGCAGGCCACAAGCCAATTGTC
CTAGAGTTCCGAGGATCCGATTCCTTGCGGTGGGGAAAACGTTTGAGGAA
TGGCGTTTCGTCCATGATATTCGACTACCCGGCCCCAGGAGTGCGGAAAG
ACTACCCTCGCCCGCCGCTGGAGGAGACTTCACAGAACCAGCGAGAGGCC
GCGGAACTGTCACAATCCTTTGTCGATCTCCCTCGGCCCGAGCGGCCACT
AAAAGTTGCCGTCATTGGAGCGGGACTCGCAGGACTATCTTGCGCCAAAT
ATTTGTCAGATGCAGGCCACAAGCCAATTGTCCTAGAGGCTCGAGATGTT
TTGGGAGGCAAGGTATCTGCGTGGCAAGACAAGGACGGCGACTGGGTTGA
AACGGGGCTACATATTTTCTTCGGCGCGTACCCGAACGTCAACAGCATGT
TCAAGGAACTGGGTATTGAGGATCGACTTCAGTGGAAATCACACAGCATG
ATTTTTGCCATGCCTGGGCAGCAGACGGACGACGGATTTCAGCGGTTCTC
GCGCTTCGATTTCCCGGATCTTTTGCCAGCTCCGCTCAACGGTTTGGTCG
CCATCCTCCTGAATAACGAGATGCTCACCTTGCTCGAGATGTTTTGGGAG
GCAAGGTATCTGCGTGGCAAGACAAGGACGGCGACTGGGTTGAAACGGGG
CTACATATTTTCTTCGGCGCGTACCCGAACGTCAACAGCATGTTCAAGGA
ACTGGGTATTGAGGATCGACTTCAGTGGAAATCACACAGCATGATTTTTG
CCATGCCTGGGCAGCAGACGGACGACGGATTTCAGCGGTTCTCGCGCTTC
GATTTCCCGGATCTTTTGCCAGCTCCGCTCAACGGTTTGGTCGCCATCCT
CCTGAATAACGAGATGCTCACCTTCCTGGAGAAGATCCAGTTTGGCATCG
GACTTATCCCAGCCATTCTTTTCGGTCAAAAGTACGTCGAAGAGTGCGAT
GACCTGACTGTAACGGAATGGATGAAAAAACAGGGAGTGCCTGATCGAGT
GAACGACGAGGTTTTCATTGCCATGGCCAAGGCCCTCAACTTTATAGACC
CTGACAACTTGTCCATGACGGTGGTTTTGACGGCCCTCAACCGATTTCTT
CAGCCTGGAGAAGATCCAGTTTGGCATCGGACTTATCCCAGCCATTCTTT
TCGGTCAAAAGTACGTCGAAGAGTGCGATGACCTGACTGTAACGGAATGG
ATGAAAAAACAGGGAGTGCCTGATCGAGTGAACGACGAGGTTTTCATTGC
CATGGCCAAGGCCCTCAACTTTATAGACCCTGACAACTTGTCCATGACGG
TGGTTTTGACGGCCCTCAACCGATTTCTTCAGGAGACACACGGATCGAAG
ATGGCTTTCTTAGACGGCCCGCCTCCTACTCGATTGTGTCAACCGATGGC
AGACTACATGCTTGCCCGCGGCGGAGAGCTGATGATGAACCAGCGTATTT
CCCAGATCCTCCTGAACGATGACAAAACGGAGACACACGGATCGAAGATG
GCTTTCTTAGACGGCCCGCCTCCTACTCGATTGTGTCAACCGATGGCAGA
CTACATGCTTGCCCGCGGCGGAGAGCTGATGATGAACCAGCGTATTTCCC
AGATCCTCCTGAACGATGACAAAACGGTAAAGGGTTTGCAAATGCAGGAT
GGCTCATTGATGGAGGCAGACGCGTACATATCAACTATGCCGGTCGACTT
GATGAAGCTTATGTTGCCCGAAGAGTGGCGACCTATGCCATATTTCAAGA
AGTTAGACGGACTTGCGGGTGTGCCCGTCATCAACATTCACATGTGGTTT
GACAGAAAGTTGACTACTGTGGACCATCTTCTGTTTTCTCGGTAAAGGGT
TTGCAAATGCAGGATGGCTCATTGATGGAGGCAGACGCGTACATATCAAC
TATGCCGGTCGACTTGATGAAGCTTATGTTGCCCGAAGAGTGGCGACCTA
TGCCATATTTCAAGAAGTTAGACGGACTTGCGGGTGTGCCCGTCATCAAC
ATTCACATGTGGTTTGACAGAAAGTTGACTACTGTGGACCATCTTCTGTT
TTCTCGGTCTCCCCTACTCTCTGTGTACGCGGATATGTCCCTCACTTGCG
ATGGTTACCGTGACGACGAAAAATCGATGTTGGAGCTGGTGTTTGCTCCT
GCGAAGGATTGGATCGGCCGACCGGACTCAGAAATCGTCGACGCAACGAT
GGAGGAGCTGTACCGACTCTTCCCCAACGAGGTCTCCCCTACTCTCTGTG
TACGCGGATATGTCCCTCACTTGCGATGGTTACCGTGACGACGAAAAATC
GATGTTGGAGCTGGTGTTTGCTCCTGCGAAGGATTGGATCGGCCGACCGG
ACTCAGAAATCGTCGACGCAACGATGGAGGAGCTGTACCGACTCTTCCCC
AACGAGATCGCCAAGGACGGCTCAGGTGCAAAGTTGCTCAAGTCTGCCGT
GGTGAAAACTCCTCTTTCGGTGTATGAGGCGACAGCAGGACGTGAGCGTT
ACCGCCCTTCCCAGACCTCTCCGATCAAGAATTTCTTCTTGGCGGGATGC
TATACAAAGCAAAAGTACTTGGCTAGTATGGAAGGGGCTACTTTCTCCGG
AAAGTTGGCTGCTAAGGCTCTCGCTGAAGCTGTGATCTCCGGAACGATCG
CCAAGGACGGCTCAGGTGCAAAGTTGCTCAAGTCTGCCGTGGTGAAAACT
CCTCTTTCGGTGTATGAGGCGACAGCAGGACGTGAGCGTTACCGCCCTTC
CCAGACCTCTCCGATCAAGAATTTCTTCTTGGCGGGATGCTATACAAAGC
AAAAGTACTTGGCTAGTATGGAAGGGGCTACTTTCTCCGGAAAGTTGGCT
GCTAAGGCTCTCGCTGAAGCTGTGATCTCCGGAACGGTACCCTTGAAGGA
GCAGGAAGCCGCTGTTTTAGCAGCATAAGTACCCTTGAAGGAGCAGGAAG
CCGCTGTTTTAGCAGCATAA
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