prot_H-paniculata_contig16254.3596.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16254.3596.1
Unique Nameprot_H-paniculata_contig16254.3596.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length288
Homology
BLAST of mRNA_H-paniculata_contig16254.3596.1 vs. uniprot
Match: A0A6H5JDS1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 2.190e-53
Identity = 105/161 (65.22%), Postives = 123/161 (76.40%), Query Frame = 0
Query:    1 VLIVATSYLWRPYLRRVQSSILAQYILLLLTDYCTKGSCNPDDQNFAMEIERQGIQNKKNISLYAVSKAMGFIPRHKLGHSFFRELGGSDTLDSSRDARVLGSFLFERLLQRSKPPPPPLPRRSLGTTSYSPENRRTLTKFT------VR-KRSDPGTGGT 154
            VL+VATSYLWRPYL+RVQSSILAQYILLLLTDYCTKG CNP DQNFA+E+ RQGI+  KNISLYAVSKAMGFIPR+KLGH+FFR+L GS+TLDSS+DA  LG+FLF++L+ RS+PPP      +  TT  SP  +     FT      +R  R   G GGT
Sbjct:  482 VLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIIRSRPPP------ARPTTKTSPPRKSLAAAFTGAGGGSIRMSRGSHGVGGT 636          
BLAST of mRNA_H-paniculata_contig16254.3596.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 3.510e-52
Identity = 93/117 (79.49%), Postives = 108/117 (92.31%), Query Frame = 0
Query:    1 VLIVATSYLWRPYLRRVQSSILAQYILLLLTDYCTKGSCNPDDQNFAMEIERQGIQNKKNISLYAVSKAMGFIPRHKLGHSFFRELGGSDTLDSSRDARVLGSFLFERLLQRSKPPP 117
            VL+VATSYLWRPYL+RVQSSILAQYILLLLTDYCTKG CNP DQNFA+E+ RQGI+  KNISLYAVSKAMGFIPR+KLGH+FFR+L GS+TLDSS+DA  LG+FLF++L+ RS+PPP
Sbjct:  434 VLLVATSYLWRPYLQRVQSSILAQYILLLLTDYCTKGYCNPGDQNFAIEMGRQGIKEGKNISLYAVSKAMGFIPRNKLGHTFFRQLAGSNTLDSSKDATTLGNFLFDQLIIRSRPPP 550          
BLAST of mRNA_H-paniculata_contig16254.3596.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 4.310e-49
Identity = 106/194 (54.64%), Postives = 135/194 (69.59%), Query Frame = 0
Query:    1 VLIVATSYLWRPYLRRVQSSILAQYILLLLTDYCTKGSCNPDDQNFAMEIERQGIQNKKNISLYAVSKAMGFIPRHKLGHSFFRELGGSDTLDSSRDARVLGSFLFERLLQRSKPPPPPLPRRSLGTTSYSPENRRTLTKFTVRKRSDPGTGGTASISRNTISSSIAF--------TRPSLPDMWTSNNIRAVS 186
            VL+VATSYLWRPYL+RVQSSILAQYILLLLTDY   G CNPDDQ FA+E+ R+GI+ ++ ISLYAVSKAMGFIPRHKLGH+FFRELGGS+TL+SSRDA+ LG ++F++LL RS+   P        T   SP  +R      V + +  G G  A    NT+ S+ +F         R SLP  WT++++ ++S
Sbjct:  451 VLLVATSYLWRPYLQRVQSSILAQYILLLLTDYAATGKCNPDDQKFAIEMGRRGIKEQEKISLYAVSKAMGFIPRHKLGHAFFRELGGSNTLNSSRDAKTLGEYMFDQLLLRSRTYSPGC------TPPASPSTKRWAYLANVGQ-TVLGGGSNA----NTLMSARSFRGGRLGPSNRASLPSSWTASDVGSLS 633          
BLAST of mRNA_H-paniculata_contig16254.3596.1 vs. uniprot
Match: D7FX36_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX36_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 9.170e-40
Identity = 91/176 (51.70%), Postives = 118/176 (67.05%), Query Frame = 0
Query:   18 QSSILAQYILLLLTDYCTKGSCNPDDQNFAMEIERQGIQNKKNISLYAVSKAMGFIPRHKLGHSFFRELGGSDTLDSSRDARVLGSFLFERLLQRSKPPPPPLPRRSLGTTSYSPENRRTLTKFTVRKRSDPGTGGTASISRNTISSSI-------AFTRPSLPDMWTSNNIRAVS 186
            QSSILAQYILLLLTDY T G CNPDDQ FA+E+ R+GI+ ++ ISLYAVSKAMGFIPRHKLGH+FFRELGG++TL+SSRDA+ LG ++F++LL RS+   P        T   SP  RR      V +    G GG+   + NT+++         A  R SLP  WT+ ++ ++S
Sbjct:  368 QSSILAQYILLLLTDYATTGECNPDDQKFAIEMGRRGIKEQEKISLYAVSKAMGFIPRHKLGHAFFRELGGTNTLNSSRDAKTLGEYMFDQLLLRSRMYSPGC------TAPASPATRRWAYLANVGQTVLGGGGGS---NANTLNAKSFRGGRLGASKRASLPSSWTAGDVGSLS 534          
BLAST of mRNA_H-paniculata_contig16254.3596.1 vs. uniprot
Match: A0A835Z0M4_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.150e-22
Identity = 54/116 (46.55%), Postives = 80/116 (68.97%), Query Frame = 0
Query:    1 VLIVATSYLWRPYLRRVQSSILAQYILLLLTDYCTKGSCNPDDQNFAMEIERQGIQNKKNISLYAVSKAMGFIPRHKLGHSFFRELG-------GSDTLDSSRDARVLGSFLFERL 109
            +L++A+++LW PYL R QSSI AQY+LL+LT+YC+ G  N + +  A +I  +  +  K +SLYAV K++ F+  HK+G S F+ELG       G DT+D+SR AR LG +L++RL
Sbjct:  341 LLLIASTHLWLPYLERTQSSIFAQYVLLILTEYCSTGIINAEFEALASQIAAKTARWSK-LSLYAVYKSVSFVQHHKVGGSVFKELGLNAEGDGGEDTIDNSRQARALGEYLYKRL 455          
BLAST of mRNA_H-paniculata_contig16254.3596.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.140e-20
Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 0
Query:    4 VATSYLWRPYLRRVQSSILAQYILLLLTDYCTKGSCNPDDQNFAMEI-ERQGIQNKKNISLYAVSKAMGFIPRHKLGHSFFRELGGSDTLDSSRDARVLGSFLFERLL 110
            +A  Y+WRPYL RVQ++I AQY++L+LTDY      N  DQ  A++  E QG  +K  +S+YA+S+AMGFIP++KL H  F    GS  +DS R AR+    LF+RL+
Sbjct:  453 LANRYMWRPYLERVQANIFAQYVILILTDYSLGYVRNDQDQYIALQFSENQGNWDK--MSMYAISRAMGFIPKNKLRHPVFAGSAGSVAMDSKRSARMFAGLLFDRLV 558          
BLAST of mRNA_H-paniculata_contig16254.3596.1 vs. uniprot
Match: A0A835YTT2_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 8.290e-10
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 0
Query:    4 VATSYLWRPYLRRVQSSILAQYILLLLTDYCTKGS-CNPDDQNFAMEIERQGIQNKKNISLYAVSKAMGFIPRHKLGHSFFRELGGSDTLDSSRDARVLGSFLFERLLQRSKPP 116
            VA   LW PYL RVQ+SI AQY++++L+++   G  C   DQ  A++       N  N+SLYA+S+AM F+P  +L         G+  + S R AR   + LF  ++ +   P
Sbjct:  136 VAHRTLWAPYLARVQASIFAQYVIMMLSEFAMDGRRCGAVDQAVALQYAANEA-NWHNMSLYAISQAMSFVPSQRLS--------GAAAIQSKRTAREFAAVLFRSVIAQCARP 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16254.3596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JDS1_9PHAE2.190e-5365.22EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FX37_ECTSI3.510e-5279.49Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A6H5JBC1_9PHAE4.310e-4954.64EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FX36_ECTSI9.170e-4051.70Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A835Z0M4_9STRA2.150e-2246.55Mechanosensitive ion channel-domain-containing pro... [more]
A0A835YNU8_9STRA2.140e-2048.15Mechanosensitive ion channel-domain-containing pro... [more]
A0A835YTT2_9STRA8.290e-1035.96EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16254contigH-paniculata_contig16254:1704..5211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16254.3596.1mRNA_H-paniculata_contig16254.3596.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16254 1703..5211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16254.3596.1 ID=prot_H-paniculata_contig16254.3596.1|Name=mRNA_H-paniculata_contig16254.3596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=288bp
VLIVATSYLWRPYLRRVQSSILAQYILLLLTDYCTKGSCNPDDQNFAMEI
ERQGIQNKKNISLYAVSKAMGFIPRHKLGHSFFRELGGSDTLDSSRDARV
LGSFLFERLLQRSKPPPPPLPRRSLGTTSYSPENRRTLTKFTVRKRSDPG
TGGTASISRNTISSSIAFTRPSLPDMWTSNNIRAVSVDNHYNHSMRSLGH
HPTGGRGVMADAVATGINRLKDATERAFGGSITTSCSGGGGGNNDVIVGP
VGSGDGVAVRGLDETGSSGIDDDVGPFGLSGGKGKGGL
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