mRNA_H-paniculata_contig10543.358.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 541 bits (1395), Expect = 4.950e-168 Identity = 326/844 (38.63%), Postives = 468/844 (55.45%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNGDRGQVRSVLNDLESAITTHLKDKYKEWKKTATTMAGSEKHSDTEKE---------------------PPSLTFCGVVEASGGSKTDLDTLSGELCRLAGKDGIDAGGNRLFSNVEQKIPVSWVRASAVMDALHEGAEPTVAAQLSGKPLVPIVGSEKLKIVTWEKALDEW--STAVKALRLSAKVGET---REDEGKVLGAALKVRQLGGTMLVSCDLVHLDPSWINELLRALLDHRVVDPAEIRSWNQKMIAYCKKNPIAFDELDAVHEKFKNVGRLTKPYIEFLWRDIPEVAGGDVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEELMMPARLPSRVGADTLFHLKSAISDGERMHFIVEIHSGYVPAGLIAQFLGAL-----GDMNRIVFRACWAEGAAFLLGGIEHLICLHEPTDVLPRRIEIDTAGSPRKEVSERGFDLRDRVRDLLKERYRGLLFKASGQPRFSVGRQAWDDRLDSLRGHLERRHDKLERALGSVLDRILEALVVHEEGRVMSQAKLVNGIDDKLVERMHEL----RLGIEEDLSEGLVERVEAKLRYIEAKIQGILIDGLGGLNKKIWTEISLNVARVRWPVPRLVCLLPEHVGSLSEDERTFGRWSARVKAVCTREKRECKGKWRRDERHPVGNNSK-----LTRKLRLFFLCAHDSSLAECGPDGQGYEVTELLKWVKKMKPFAKVGVILASIVVKTCTGLSVPTDYFNAAFGDAAGGVVSDIFKQAVDAGVDGMASNAA---EGLSSAGDEEKL 2403 Q+FLT G+L +LVVDL+KF +PS G++V++WLD+LLCR+PG V+ VATHAD F +R + + L+ LE+AI HLK+K +EW+ T +EK T ++ PP+L CG + SG S DL L ++ +A + LF ++ Q +P SW R AVMDAL EGA+P A +L G PL P+ G EK + VT E A + W L AK ++ ++D ++ AALK+RQ+GG++L +C LVHL+ +WINELLR LLDHR+ DP + + W +++ YC + F+ L +H +F G LTK Y+ FLWR++ V +V R++ T++ A+F CE + G EG E M+PARLP+ V +L L++A+S G RM F++ I +GYVP G+I QFLG L G VF W G AF+ G E L+ L E R +E++ AG K+V GF +++ V LL++RY GL F +P F GR+AW D +LRG L ++LE L +VL +ILE +G S + ID L +R+ L +L + L+E ++ V + ++A + + GL + I ++ VA +RWP+PR VC+LP LSE +R+F +WS +K C + K + +G N +TR+LRLFFLC D SLAECGPDGQGYEV E L WV+K P AK+G+ LASI +K CTGL+V TD F AAFG + +S + A+ AG++G S A + L ++G E+L Sbjct: 251 QLFLTSGSLHVLVVDLHKFVCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDNRERSAAALSKLEAAINDHLKEKREEWQ---TAQRQAEKAKQTPQDRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEAS-------LFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDG-PLAPVEGREKREFVTREAAFEAWWGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAKWWVEQLKTYCHDRGVKFNRLIGIHRRFVITGMLTKEYLRFLWREVKAVQDEEVFDRLVDTMALHDAMFPCE-KNGVLEEG--------------EFMVPARLPASVACASLAELENAVSQGTRMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAFMTAGQEILVRLGETCAPSQRVVEVNIAGGAEKDVYATGFGIKNLVVRLLEQRYPGLDFDPETKPTFKKGREAWQDTRAALRGDLV---EELEPNLEAVLRKILEPSSSPGDGLAESNTLIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMKVVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVAILRWPIPRFVCVLPARDTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSED--MSAFVEDALSAGIEGTTSKAGNRLDRLQNSGPSERL 1063
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 510 bits (1314), Expect = 1.620e-156 Identity = 325/855 (38.01%), Postives = 470/855 (54.97%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNGDRGQVRSVLNDLESAITTHLKDKYKEW--------------KKTATTMAG--SEKHSDTEKE-PPSLTFCGVVEASGGSKTDLDTLSGELCRLAGKDGIDAGGNRLFSNVEQKIPVSWVRASAVMDALHEGAEPTVAAQLSGKPLVPIVGSEKLKIVTWEKALDEWSTAVKA----LRLSAKVGET-REDEGKVLGAALKVRQLGGTMLVSCDLVHLDPSWINELLRALLDHRVVDPAEIRSWNQKMIAYCKKNPIAFDELDAVHEKFKNVGRLTKPYIEFLWRDIPEVAGGDVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEELMMPARLPSRVGADTLFHLKSAISDGERMHFIVEIHSGYVPAGLIAQFLGALGD-----MNRIVFRACWAEGAAFLLGGIEHLICLHEPTDVLPRRIEIDTAGSPRKEVSERGFDLRDRVRDLLKERYRGLLFKASGQPRFSVGRQAWDDRLDSLRGHLERRHDKLERALGSVLDRILEALVVHEEGRVMSQAKLVNGIDDKLVERMHELRLGIEEDLSEGLVERVEAKLRYIEAKIQGILIDGL-------GGLNKK---IWTEISLNVARVRWPVPRLVCLLPEHVGS---LSEDERTFGRWSARVKAVCTREKRECKGKWRRDERHPVGNNSKLTRKLRLFFLCAHDSSLAECGPDGQGYEVTELLKWVKKMKPFAKVGVILASIVVKTCTGLSVPTDYFNAAFGDAAGGVVSDIFKQAVDAGVDGMASNAAEGLSSAGDEEKL----TSLIEAQKVR 2433 QMFLTDGAL LLVVDL+KF + RG V+IWLD+LLCR+PG AV+ VATHAD F D + L L++A+T HL+ K ++W + A+T SE +D K PPSL CG + SG S L T+ ++ +A + + F +V + +P W R AVMDALH GA+P A +L G P+V I G +K + VT E+A + WS A + L + GE R + AAL +R +GG++L C L+HL+PSWIN LLR +LDHR+ DP E W +++ AY + I +EL H F G LT+ ++ FLWRD+ + V +R++ T++ A+F C V G+ E M+PARLP V D+ L+ A+S G RM F++EI++ YVP +IA+FLG G ++FR CWA G AF+ G E L+ + E + IEI+ AG +V + GF+++ V+DLL+E Y GL F +S PRF G +AW D L++L+ L DKL++ L SVL LEA +G+ +S +++ + R++ L L + D + L +AK+ + A+++ ++ L GGLN+ I ++ NVA + WP+P L+C+LP L E +R+F WS ++ C+ E + +G T+KLRLFFLC D SLAECGPDGQGY+VTELL W KK KP A++G+ LASI VK CTGL++P A G AGGV+S+ ++A+ + V+ MA+ A E L E++ +E +K+R Sbjct: 256 QMFLTDGALHLLVVDLHKFDRDVLSRGGGVYIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPAV-------FPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEG-PVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDEWWWKQLKAYERNRGIPINELLETHRHFTTTGILTEEFLRFLWRDVLKGVDEKVFARLVETMTAHDAMFPCNDGVTE--------------GNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLVRVGEVSARPLPMIEINIAGPDVNDVFKVGFEIKKNVKDLLREAYPGLAFDSSAHPRFENGTEAWQDSLEALQKDL---FDKLDQRLESVLSEFLEAF----KGQSLS-------VNEAVARRLNSLCLDCQRDANFQL----DAKVHEVVARVEQVVRASLSTTAVPKGGLNETERGILNSLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCS-------------EGNKMGRGV-ATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERLEDGSPAERVHHAGACRLEREKMR 1056
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: A0A6H5L6I0_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE) HSP 1 Score: 380 bits (976), Expect = 1.320e-111 Identity = 240/690 (34.78%), Postives = 365/690 (52.90%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNGDRGQVRSVLNDLESAITTHLKDKYKEWKKTATTMAGSEKHSDTEK-------------------EPPSLTFCGVVEASGGSKTDLDTLSGELCRLAGKDGIDAGGNRLFSNVEQKIPVSWVRASAVMDALHEGAEPTVAAQLSGKPLVPIVGSEKLKIVTWEKALDEW--STAVKALRLSAKVGETR---EDEGKVLGAALKVRQLGGTMLVSCDLVHLDPSWINELLRALLDHRVVDP-----------AEIRSWNQKMIAYCKKNPIAFDELDAVHE---------------KFKNVGRLTKPYIEFLWRDIPEVAGGDVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEELMMPARLPSRVGADTLFHLKSAISDGERMHFIVEIHSGYVPAGLIAQFLGAL-----GDMNRIVFRACWAEGAAFLLGGIEHLICLHEPTDVLPRRIEIDTAGSPRKEVSERGFDLRDRVRDLLKERYRGLLFKASGQPRFSVGRQAWDDRLDSLRGHLERRHDKLERALGSVLDRILEALVVHEEGRVMSQAKLVNGIDDKLVERM----HELRLGIEEDLSEGLVERVEAKLRYIEAKIQGILIDGLGGLNKKIWTEISLNVARVR 1893 Q+FLT G+L +LVVDL+KF +PS G++V++WLD+LLCR+PG V+ VAT+AD F + + + L+ LE+AI HL++K EW+ TA A + K + ++ PP+L CG + SG S DL L ++ +A ++ LF ++ QKIP SW R AVMDAL EGA+P A +L G PL P+ G EK + VT E+A + W + L AK +++ +D ++ AALK+RQ+GG++L +C LVHL+ +WINELLR LLDHR+ DP A W +++ YC++ + F+ L +H +F G +TK Y+ FLWR++ V +V R++ T++ A+F C+ + G EG E M+PARLP+ V +L L+ AIS G RM F++ I++GYVP G+I QFLG L G VF W G AF+ G + L+ L E R +E++ AG K+V + GF ++ + LL++RY GL F P G++AW + +LRG L ++LER L +VL RILE +G S + ID L +R+ +++L + L+E +E V + ++A + + GL + I ++ +A +R Sbjct: 146 QLFLTSGSLHVLVVDLHKFVCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATYADAFGDNHERSAAALSKLEAAIHEHLEEKRMEWQ-TAQRQAENTKQTPQDRCGPPASGSTTGYPADHAAAPPPTLQLCGFISGSGRSLEDLSVLGRKIWEIAHEES-------LFPDIHQKIPKSWRRVWAVMDALREGADPQKAVRLDG-PLAPVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQHLNQDSQRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFVSLSHFAAANWWVEQLRTYCRERGVLFNRLIGIHRVQTVPCKNNQSCALRRFVITGVITKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCD-KNGIHQEG--------------EFMVPARLPASVPCASLAELEKAISQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDCGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCVPSQRVVEVNIAGDAEKDVYDTGFAIKKLIVRLLEKRYPGLDFDPEANPTLMKGKEAWQETRAALRGDLV---EELERNLEAVLRRILEPSSNPGDGLAESNTLIPKLIDGALAKRLTSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVVGLRPSERNILVGVARELALLR 808
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 217 bits (553), Expect = 3.380e-54 Identity = 248/891 (27.83%), Postives = 365/891 (40.97%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNGDRGQVRSVLNDLESAITTHLKD---KYKEWKKTATTMAGSEKHSDTEKEPPSLTFCGVVEA-------SGGSKTDLDTLSGELCRLA--GKDGIDAGGNRLFSNVEQKIPVSWVRASAVMDALHEGA---------EPTVAAQLSGKPLVPIVGSEKLKIVTWEKALDEWSTAVKALRLSAKVGET----------------REDE-GKVLGAALKVRQLGGTMLVS----------------------CDLV-HLDPSWINELLRALLDHRVVDPAEIRSWNQKMIAYCKKNPIAFDELDAVHEKFKNVGRLTKPYIEFLWRDIPEVAGGDVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEELMMPAR------LPSRVGADT----LFHLKSAISDGERMHFIVEIHSGYVPAGLIAQFLGALGDMNRIVFRACWAEGAAFLLGGIEHLICLHEPTDVLPRR-IEIDTAGSPRKEVSERGF-DLRDRVRDLLKERYRGLLFKASGQPRFSVGRQAWDDRLDSLRGHLERRHDKLERALGSVLDRILEALVVHEEGRVMSQAKLVNGIDDKLVERMHELRLGIEEDLSEGLVERVEAKLRYIEAKIQGILIDGLGGLNKKIWTEISL--NVARVRWPVPRLVCLLPEHVGS---LSEDERTFGRWSARVKAVCTREKRECKGKWRRDERHPVGNNSKLTRKLRLFFLCAHDSSLAECGPDGQGYEVTELLKWVKKMKPFAKVGVILASIVVKTCTGLSVPTDYFNAAFGDAAGGVVSDIFKQAVDAGVDGMASNAAEGLSSAGDEEKLTSLIEAQKVRPQ 2439 QMFLT GAL +LVVD++ + S ++V WLD L R+PG ++ V TH D F + + + + + +K + K A T G E+H D E P V+E + D+ L L LA G DG FS+V +P ++ A ++A+ GA E V G P + V+ + E ST + L+A + R+DE ++ AA+K + G +L++ DL+ H++PS +L+R ++D R+VDP + Q M A P+ D H++F G ++K Y++FLW E+ G L +SE + VGS + RV D + +P R LP++ G + + LK+ + + +V H+ VP GL+ + L G + +ACW G F H++ L+E D IE GS E + D+ D+V +L+ +R G L +RG E EALV + E LV+R+ LR +N K + S+ ++A +RWP+PRLVC+LP L E +R+F +WSA ++ C KR+ KG TRKLRLFFLC +D SLAECGP GQGYEVTELL W KK P AKVG+ LAS K CTGLS+P F A G AGG +S + ++++G + MAS A E L G ++L + AQ+ Q Sbjct: 138 QMFLTQGALFVLVVDMFAYAEGHSPE-DAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKRISCQCDSAKNLAETELG-ERHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYDGYS------FSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPMLLTLTDQ-HKRFVKAGEVSKDYLKFLWLRDMEL-GQASPEAPPLEMSEADV----DVMVGSLLDVRFM----YRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHA--VPPGLVPRLLAWCGRGEGHI-KACWKRGVCFAFKN--HMVLLYEVRDTAGNSWIECHARGSMFDESARTALNDIGDQVNELINDRKYGF------------------PGLGLIRGESE------------------EALVSSDGDH-------------------------------EALVKRIVNMLR--------------DQMNVKFMMDRSIKQDLAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFDKWSATLRNWCLGGKRKGKGV--------------ATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIPEADFEATLGTKAGGALSTFVEDSLNSGGESMASIAGERLDG-GTADELLQGVGAQRFGAQ 909
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 208 bits (530), Expect = 7.010e-51 Identity = 242/860 (28.14%), Postives = 361/860 (41.98%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNGDRGQVRSVLN----DLESAITTHLKDKYKEWKKTATTMAGSEKHSDTEKEPPSLTFCGVV--------EASGGSKTDLDTLSGELCRLA--GKDGIDAGGNRLFSNVEQKIPVSWVRASAVMDALHEGAE--------PTVAAQLS-GKPLVP---IVGSEKLKIVTWEKALDEWSTAVKALRLSAKVGETREDEGKVLGAALKVRQLGGTMLVS----------------------CDLV-HLDPSWINELLRALLDHRVVDPAEIRSWNQKMIAYCKKNPIAFDELDAVHEKFKNVGRLTKPYIEFLW-RDIPEVAGGDVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEELMMPAR------LPSRVGADT----LFHLKSAISDGERMHFIVEIHSGYVPAGLIAQFLGALGDMNRIVFRACWAEGAAFLLGGIEHLICLHEPTDVLPRR-IEIDTAGSPRKEVSERGF--DLRDRVRDLLKERYRGLLFKASGQPRFSVGRQAWDDRLDSLRGHLERRHDKLERALGSVLDRILEALVVHEEGRVMSQAKLVNGIDDKLVERMHELRLGIEEDLSEGLVERVEAKLRYIEAKIQGILIDGLGGLNKKIWTEISL--NVARVRWPVPRLVCLLP---EHVGSLSEDERTFGRWSARVKAVCTREKRECKGKWRRDERHPVGNNSKLTRKLRLFFLCAHDSSLAECGPDGQGYEVTELLKWVKKMKPFAKVGVILASIVVKTCTGLSVPTDYFNAAFGDAAGGVVSDIFKQAVDAGVDGMASNAAEGL 2376 QMFLT GAL +LVVD++ + S R +++ WL+ L R+PG V+ V TH D F + + + D+E I T L+ + K T G E H+ K P VV + + D+D L L LA G DG F +V +P ++ A A ++A+ GA+ VA +L G P + SE + + T +K S + L + GE R ++ AA+K + G +L++ DL+ H++PS +L+R ++D R+VDP + + M A P+ D H++F G ++K Y++FLW RD+ G L +SE E VGS + RV D + +P R LP++ G + + LK + + +V H+ VP GL+ + L G + +ACW G F HL+ L+E + IE G+ + S R D+ D+V +L+ + G LG V E V+ + D K L+ER+ LR +N K + S+ +VA +RWP+PRLVC+LP L E +R+F +WSA ++ C KR KG TRKLR+FFLC +D SLAECGP GQGYEVTELL W KK PFA+VG LASI ++ C GL++P F A G AGG +S ++++++G++ +AS A E L Sbjct: 433 QMFLTPGALFVLVVDMFTYTEGQS-REDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEE-IMTRLRCECDSAKDRVETELG-EGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYS------FPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKG----SMFSRVSNLFRRAGEPR----RIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPMLLTLTDQ-HKRFVKAGEVSKDYLKFLWLRDMD--LGEASQEAPPLEMSEADV----EVMVGSLLDVRFM----YRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHA--VPPGLVPRLLAWCGRGEGRI-KACWKRGVCFAFKN--HLVLLYEVRAIDGTSWIECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFP------------------------------------GLGLVRSGESEETVISSDS------------DHK------------------ALLERIVDVLR--------------DQMNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKGF--------------ATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERL 1165
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 172 bits (435), Expect = 8.540e-40 Identity = 218/856 (25.47%), Postives = 340/856 (39.72%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNGDRGQVRSVLNDLESA----------------------ITTHLKDKYKEWKKTATTMAGSEKHSDTEKEPPSLTFCGVVEA-------SGGSKTDLDTLSGELCRLAGKDGIDA-GGNRLFSNVEQKIPV-------SWVRASAVMDALHEGAEPTVAAQLSGKPLVPIVGSEKLKIVTWEKALDEWSTAVKALRLSAKVGETREDEGKVLGAALKVRQLGGTMLVSCDLVHLDPSWINELLRALLDHRVVDPAEIRSWNQKMIAYCKKNPIAFDELDAVHEKFKNVGRLTKPYIEFLW-RDIP-----------EVAGGDVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEELMMPAR------LPSRVGADT----LFHLKSAISDGERMHFIVEIHSGYVPAGLIAQFLGALGDMNRIVFRACWAEGAAFLLGGIEHLICLHEPTDVLPRRIEIDTAGSPRKEVSERGFDLRDRVRDLLKERYRGLLFKASGQPRFSVGRQAWDDRLDSLRGHLERRHDKLERALGSVLDRILEALVVHEEGRVMSQAKLVNGIDDKLVERMHELRLGIEEDLSEGLVERVEAKLRYIEAKIQGILIDGLGGLNKKIWTEISL--NVARVRWPVPRLVCLLPEHVGS---LSEDERTFGRWSARVKAVCTREKRECKGKWRRDERHPVGNNSKLTRKLRLFFLCAHDSSLAECGPDGQGYEVTELLKWVKKMKPFAKVGVILASIVVKTCTGLSVPTDYFNAAFGDAAGGVVSDIFKQAVDAGVDGMASNAAEGL 2376 QMFLT GAL +LVVD++ + S + +++ WL+ L R+PG ++ V TH D F + + + + I T ++ + K A G +D + P V+E + D+D L L LA G D G V Q++ S+VR S + E ++ + LS L +E +I E A+ + G ++E +GAA L ++H++PS +L+R ++D R+V P + + M A C + L H++F G ++K Y++FLW RD+ E++ DV M+ +L + ++R V D + +P R LP++ G D + LK+ + + +V +H+ VP GL+ + L HL+ L+E T G+ E RG + R LK+ +G D++D L + R LG V E VV+ + D K L+ER+ R +N K+ + S+ +VA +RWP+PRLVC+LP L E +R+F +WSA ++ C KR KG TRKLR+FFLC +D S+AECGP GQGYEVTEL++W KK P AKVG+ LASI ++ C GL++P F A G AGG +S ++++ +GV+ +AS A + L Sbjct: 178 QMFLTPGALFVLVVDMFTYEVGQS-KEDALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELGEGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNGGADLRGSGSTREAVAQRLREGNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRD---NEPRRIFLAAVKSHEAHGAIHLTGVDGG-GGSQEQHNTGIGAAASAADL---------IIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEA-CPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADV-EVMVSSLLDVRFMYR--------------------VRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHA--VPPGLVPRLLSC-------------------------HLVLLYEVRA---------TDGTSWIECHARGNVFDESARTALKD----------------IG-----DQVDELISDHKNRFP----GLGLVRSGESEETVVYSDS------------DHK------------------ALLERIVDVQR--------------DQMNVKLMMDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEGDRSFEQWSATLRNWCLGGKRTGKGF--------------ATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIALRVCIGLAIPEVDFKATLGTKAGGALSTFAEESLHSGVESVASIAGDRL 878
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 125 bits (314), Expect = 2.640e-25 Identity = 190/780 (24.36%), Postives = 303/780 (38.85%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNGDRGQVRSV----LNDLESAITTHLKDKYKEWKKTATTMAGSEKHSDTEKEPPSLTFCGVVEASGGSKTDLDTLSGELCRLAGKD-GIDAGGNRLFSNVEQKIPVSWVRASAVMDALHEGA-------EPT-VAAQLSGKPLVPIVGSEKLKIVTWEKALDEWSTAVKALRLSAKVGETREDEGKVLGAALKVRQLGGTMLVS-CD--------------LVHLDPSWINELLRALLDHRVVDPAEIRSWNQKMIAYCKKNPIA-FDELDAVHEKFKNVGRLTKPYIEFLWRDIP-EVAGGDVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEE-LMMPARLPSRVGADT----LFHLKSAISDGERMHFIVEIHSGYVPAGLIAQFLGALGDMNRIVFRACWAEGAAFLLGGIEHLICLHEPTDVLPRRIEIDTAGSPRKEVSERGFDLRDRVRDLLK----ERYR----GLLFKASGQPRFSVGRQAWDDRLDSLRGHLERRHDKLERALGSVLDRILEALVVHEEGRVMSQAKLVNGIDDKLVERMHELRLGIEEDLSEGLVERVEAKLRYIEAKIQGILIDGLGGLNKKIWTEISLNVARVRWPVPRLVCLLPEHVGSLSEDERTFGRWSARVKAVCTREKRECKGKWRRDERHPVGNNSKLTRKLRLFFLCAHDSSLAECGPDGQGY--EVTELLKWVKKMKPFAKV 2205 QMFLT GAL +LVVD++ + + R +++ WLD L R+PG V+ + TH+D F+ + V +L + + + K A + + EP + + A S + T + + G G+ G + F +V ++P + A A ++A+ G EP VA +L+ V E V + +AL + ++ G + +V AA+K+ ++ G +L++ D ++H++P+W +L+R ++D R++DPA+ R +K+ K+ P A +L H +F G L + Y+ FLW+D E+ + L +SE E + RV NE+ ++P+ LP VG D L L+ + R V HS VP GLI + L G + + ACW G F EHL+ L+E D IE GS E + R L D V +L + +Y GL F G + + + L G L+ + + LG LD I + H LR G EE S L E V +L I A + +E L A P PRL+ + + V + + R + + + R+ FLCA+D S A CG DG GY E+ W++K P +V Sbjct: 126 QMFLTPGALFVLVVDMFAYSEDGHSREDALEQWLDILQARVPGSVVLLMGTHSDSFDSPAECSKRVDCFVKGELLPLYKNFIMKRIGDECKAAADRGHAGVQDNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYS--FPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKV----GEGHPFVLFPEALSRF---LEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEMEDMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQ--EKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFM--------FRVRQNEDHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHS--VPPGLIPRLLAWCGQGDERI-TACWKRGVCFSFK--EHLVLLYEHRDAGRAVIECHAMGSAHDEKAWR--TLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKH-------------------------LRKGQEEMAS--LREDVSLQLDCIAA----------------VTSECLLVSAEKDIPCPRLIMVSEDDVPESDQSRLSHFRREMMDQLFL--------------------GKGQTPQHYRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQV 816
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.210e-19 Identity = 193/829 (23.28%), Postives = 314/829 (37.88%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNGDRGQVRSVLNDLESAITTHLKDKYKEWKKTATTMAGSEKHSDTEKEPPSLTFCGVVEA-----SGGSKTDLDTLSGELCRLAGKDGIDAGGNRLFSNVEQKIPVSWVRASAVMDALHEGA-------EPT-VAAQLSGKPLVPIVGSEKLKIVTWEKALDEWSTAVKALRLSAKVGETREDEGKVLGAALKVRQLGGTMLVSCD----------------LVHLDPSWINELLRALLDHRVVDPAEIRSWNQKMIAYCKK-NPIAFDELDAVHEKFKNVGRLTKPYIEFLW--RDI------PEVAGG--DVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEELMMPARLPSRVGADTLFHLKSAISDGERMHFIVEIHSGY---VPAGLIAQFLG--ALGDMNRIVFRACWAEGAAFLLGGIEHLICLHEPTDVLPRR-IEIDTAGSPRKEVSERGFDLRDRVRDLLKERYRGLLFKASGQPRFSV-GRQAWDDRLDSLRGHLERRHDKLERALGSVLDRILEALVVHEEGRVMSQAKLVNGIDDKLVERMHELRLGIEEDLSEGLVERVEAKLRYIEAKIQGIL--IDGLGGLNKK-IWTEISLNVARVRWPVPRLVCLLPEHVGSLSEDERTFGRWSARVKAVCTREKRECKGKWRRDERHPVGNNSKLTRKLRLFFLCAHDSSLAECGPDGQGY--EVTELLKWVKKMKPFAKVGVILASIVVKTCTGLSV-PTD----YFNAAFGDAAGGVVSDI 2316 QMFLT GAL +LVVD++ + + R +++ WLD L R+PG V+ V TH+D F+ + + D +++ ++ + + +P + + A SGG T E DG F +V ++P + A A ++A+ GA +P V +L G+ L E + + +AL + L G E E L A + G ++ D ++H++P+W +L+R ++D R++DPA+ +K+ K+ +P + EL H +F G ++K Y++FLW RD+ P +A ++ + T+ E R RV + + ++P+ LP VG T+ K D F ++ G VP GLI + L + GD CW G F +HL+ L+E R IE GS E + G L D V +L R L+ G P++ G + D G +E + L +L R L H A+ N I G+E L +G E + I+ Q + +D + + K + + ++ P PRL+ +L E V S R V + RE + R+ FLCA+D + CG DG GY E+ +W+K P KV + L + + T V P D G+ A G++ +I Sbjct: 298 QMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPADCSKRDIMDRVGRECKSARERARQESAGNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYS------FPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKL-----DEGQPFILFPEALSLFLEVAGEKSLFG--GNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQ----QEKLAEVIKRQSPASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNKDHY---------------IVPSCLPDHVGC-TVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDAR---ITTCWKRGVCFAFNR-KHLVLLYEHRKEAGRSVIECHAMGSAHNEKA--GGTLDDVVAEL-----RRLV----GDPKYGFPGIWLFFD------GGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAG-----------GVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLLVSVEKDI-----PCPRLIMVL-EDVSPGSALSRLSHFRRDMVDKLLRRE-----------------GEGPAPQCYRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVAGEEAAGILGEI 1038
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 101 bits (252), Expect = 7.000e-18 Identity = 133/506 (26.28%), Postives = 196/506 (38.74%), Query Frame = 1 Query: 1 QMFLTDGALQLLVVDLYKFHA-------NPSCRGNSVFIWLDALLCRIPGCAVMAVATHADRFNG-DRGQVRSVLNDLESA------------ITTHLKDKYKEWKK----------TATTMAGSEKHSDTEKEPPS---------LTFCGVVEASGGSKTDLDTLSGELCRLAGKDGIDAGGNRLFSNVEQKIPVSWVRASAVMDALHEGAEPTVAAQLSGKPLVPIVGSEKLKIVTWEKALDEWSTAVKALRLSAKVGETREDEGKVLGAALKVRQLGGTMLVSC---------DLVHLDPSWINELLRALLDHRVVDPAEIR--SWNQKMIAYCKKNPIAFDELDAVHEKFKNVGRLTKPYIEFLW--RDI----PEVAGGDVVSRMLLTLSERGAVFRCECRVGSESEGHKGDDEECRVGDNEELMMPARL--------PSRVGADTLFHLKSAISDGERMHFIVEIHSGYVPAGLIAQFLGALGDMNRIVFRACWAEGAAF 1326 Q+FLT GAL LLVVDL+ F N + ++ WL+ L R+PG AV V +H D+ D Q + L+ E++ ++ +KDK + + M D P S L G V + T + L + + A G N F V+Q + +W+ A MD L +G P V W +A++E+ R + + D GKVL A++ R+ G +L+S D++HLDPSW+ EL+R L DH +VD + + S Q + Y K+ +A L +H + GRL + Y+ FLW R I P V D +++ ER V R DN L++PARL P R+ T LK S G+ Y P G++ +FL A + CW GA F Sbjct: 349 QLFLTKGALFLLVVDLHAFSKEIGSGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVDQMESEDARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRDDGRMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFN--FPAVDQTVSKAWIEAYDAMDVL-KGTAPCVL---------------------WSRAVEEFR------RKMSGIPPVAGDAGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIEGPGPTVDLTDPEFESIVSTMERLLVMYT-----------------ARDADN--LVVPARLQEYGDQRIPDRL---TNMVLKIECSFGQV----------YPPPGIVGRFL-AWSAQQVADYGECWQHGAFF 791
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 2.250e-17 Identity = 65/157 (41.40%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 1822 LIDGLG---GLNKKIWTEISL--NVARVRWPVPRLVCLLPEHVGS---LSEDERTFGRWSARVKAVCTREKRECKGKWRRDERHPVGNNSKLTRKLRLFFLCAHDSSLAECGPDGQGY------EVTELLKWVKKMKPFAKVGVILASIVVKTCTGL 2250 L++ +G G K T+ S+ + A ++WP+PRL+CLLP L E + +F WSA ++ C KR+ KG TRKLRLFFL +S +E GP G+ +VTELLKW KK KPFAKVG+ LASI ++ CTGL Sbjct: 266 LVERIGRPEGSGVKFMTDRSIRQDAAFLQWPIPRLLCLLPAPKSGAKPLEEKDGSFEEWSATLRKWCLGGKRKGKGV--------------ATRKLRLFFLRTTGASPSE-GPQGKASRADVRSQVTELLKWAKKAKPFAKVGLALASIALRECTGL 407 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10543.358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10543.358.1 >prot_H-paniculata_contig10543.358.1 ID=prot_H-paniculata_contig10543.358.1|Name=mRNA_H-paniculata_contig10543.358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=813bp MFLTDGALQLLVVDLYKFHANPSCRGNSVFIWLDALLCRIPGCAVMAVATback to top mRNA from alignment at H-paniculata_contig10543:2331..7537- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10543.358.1 ID=mRNA_H-paniculata_contig10543.358.1|Name=mRNA_H-paniculata_contig10543.358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5207bp|location=Sequence derived from alignment at H-paniculata_contig10543:2331..7537- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10543:2331..7537- >mRNA_H-paniculata_contig10543.358.1 ID=mRNA_H-paniculata_contig10543.358.1|Name=mRNA_H-paniculata_contig10543.358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4878bp|location=Sequence derived from alignment at H-paniculata_contig10543:2331..7537- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |