prot_H-paniculata_contig16199.3568.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: UPI000B8A7035 (uncharacterized protein LOC110788974 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A7035) HSP 1 Score: 58.5 bits (140), Expect = 7.770e-7 Identity = 32/97 (32.99%), Postives = 54/97 (55.67%), Query Frame = 0
Query: 21 KAVQAGRCWYNELNNDLKAPGFQSSYA--KLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAW 115
K +A RCW+ +L+ LK GF+ SY+ LC S+ EL + V+ Y D +IA A++ F A L +K++DL + Y++G + R++ +
Sbjct: 619 KRWEAPRCWFEKLSTALKQYGFKQSYSDYSLCTLSK---GELQLSVLVYVDDMIIAGNNVFALNSFKAYLSQCFKMKDLGHLKYFLGLEVARSKSGF 712
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 53.5 bits (127), Expect = 3.320e-5 Identity = 37/143 (25.87%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 3 IELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIA--VGIVKTSAIP 139
++L ++ G + +L K++ QA R Y L +DL GF+ S + C ++ E+ + + A D ++ + + V L ++L EV +++GC I+R+R+A ++I Q Y++ + I +TS+IP
Sbjct: 1 MKLPPGCDSMSGKIVRLNKSLYGLKQASRTSYKRLVSDLLWIGFEQSLSDPCVLRFMMGDEV-MGIFAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNICRTSSIP 142
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A396ICJ3_MEDTR (Putative RNA-directed DNA polymerase n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396ICJ3_MEDTR) HSP 1 Score: 53.1 bits (126), Expect = 5.500e-5 Identity = 34/105 (32.38%), Postives = 55/105 (52.38%), Query Frame = 0
Query: 13 PGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRD 113
P V +LKK++ QA RCW+ +L LK GF SY+ ++ + E+ I V+ Y D +IA A+ F A L + ++DL + Y++G + RN +
Sbjct: 587 PNLVCRLKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYSLFT-LHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARNHE 690 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig16199.3568.1 ID=prot_H-paniculata_contig16199.3568.1|Name=mRNA_H-paniculata_contig16199.3568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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