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Homology
BLAST of mRNA_H-paniculata_contig1618.3561.1 vs. uniprot
Match: D7FQD2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD2_ECTSI) HSP 1 Score: 228 bits (582), Expect = 9.330e-62 Identity = 157/419 (37.47%), Postives = 204/419 (48.69%), Query Frame = 3
Query: 3747 SLSYLCLRSLESSLGKGLASLSLQGLPLGLAEKIYRYVAERGSRMAQMEVSRALAPLLSRTVICLDFTNSETEHQSSCSGGSSCGYSNGFIGESALLELANGCGMGLIHLDLGGCRLVKNAGVLAVLARCQNLSSLGLSGLDGVSDQALYLIPHQIPYLTKLNLAGLSGITASGIAYLSFLPSLEHLNLARCCQIGDEAAAALGRGNCSDSLRWLDLSGTATTDDGVSSLHHTKLLEFISLSSTTVSLALVNALARDLNLPAALPDAPKMHARSNRTLLMGSRWSRRQSGFAPRRLPHSTRNTAGSLRYGHGTSKRGWEG-----------GPSKLLRIGTGVGVGDCQVGGSRKRPVLAGEPVVQK-VQVGFGDGEGGDXXXXXXXXXXXXXXXXXGRELLVELVNGIVRLWPAVPVR 4967
+L LCLRSLESSLGKGLA+ LQ LPLGLAE +Y +VA GSRMA ME+ RALAP+L + V LDF+ ++ +G+SALLELANGC L+ L+L C + + +LA L +C + L SG+AY+++LP+LE L LAR C + D A A+ G C SLRWLDL+ TA + +SL + LE V ALARDL LPA LP+APK ARS+R LL+GS+WS Q P++ +T TA G + W GPSK +R+ +G + + + P V+VGF D GR+LL+ LV GIVRLWPAVP R
Sbjct: 53 TLGILCLRSLESSLGKGLATFDLQDLPLGLAETVYDFVASAGSRMAHMEILRALAPILRQHVSSLDFSRAK------------------IVGDSALLELANGCDSSLVQLNLSSCCFITDGALLATLLKCPGVKDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGVAYIAYLPALEQLCLAR-CNVSDAAVVAITTGVCRQSLRWLDLTCTAISAAAAASLRDLQRLEXXXXXXXXXXXXXVAALARDLRLPAFLPEAPKTRARSSRALLLGSKWSETQLRSLPKKRAATTAATAA------GAPAKSWRNSIASVICYERDGPSKAMRL----------IGAASRVSSSSSSPCADDLVEVGFRD----------------DGIEEGGRKLLLNLVQGIVRLWPAVPSR 420
BLAST of mRNA_H-paniculata_contig1618.3561.1 vs. uniprot
Match: A0A6H5JDR1_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDR1_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.050e-30 Identity = 76/171 (44.44%), Postives = 97/171 (56.73%), Query Frame = 3
Query: 1524 RSVRYCCRECQRQHWTME-HKDSCAYLSTRTAMIHESEILQDTARQQSMDSRTGQSILTILDSIVGSRVIPPEEAPTPAR--ANGWELCPVVNMLGVPLAIKKVSACQCQQCVGCTATQDVPANQIATRLAIEPQTGRAPFRWAGSGTNHLGTVWVARTDGQAFTSKEYAV 2027
++ +YC RECQR+ W + HKD C L+ + LQ R+ I++I D V + ++ EE PT A GWELCPVVNMLGVPLAI KV C C C+ + P NQ+ATRLAIEP G AP +W G NHLGTV VAR D + FT +++ V
Sbjct: 21 KTAKYCSRECQRRDWIVGGHKDRCRELARQRGATDSEAALQ---------GRSTVGIVSIFDQQVSNSIMSLEELPTAGAPGAQGWELCPVVNMLGVPLAIMKVCPCACHICLRGNSQIPEPRNQVATRLAIEPHNGLAPPKWQGGPHNHLGTVAVARMDLRDFTVEDWRV 182
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 229.9 |
| Seed ortholog evalue | 2.2e-57 |
| Seed eggNOG ortholog | 2880.D7FQD2 |
| KEGG ko | ko:K10268 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | modulation by host of viral RNA genome replication |
| EggNOG OGs | KOG4341@1,KOG4341@2759 |
| COG Functional cat. | KLT |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04121 |
| Exons | 7 |
| Model size | 6202 |
| Cds size | 1314 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1618.3561.1 >prot_H-paniculata_contig1618.3561.1 ID=prot_H-paniculata_contig1618.3561.1|Name=mRNA_H-paniculata_contig1618.3561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=438bp
MSEWFPPDIISRTRHEGYLSCTRVEDAGDVSLSYLCLRSLESSLGKGLAS LSLQGLPLGLAEKIYRYVAERGSRMAQMEVSRALAPLLSRTVICLDFTNS ETEHQSSCSGGSSCGYSNGFIGESALLELANGCGMGLIHLDLGGCRLVKN AGVLAVLARCQNLSSLGLSGLDGVSDQALYLIPHQIPYLTKLNLAGLSGI TASGIAYLSFLPSLEHLNLARCCQIGDEAAAALGRGNCSDSLRWLDLSGT ATTDDGVSSLHHTKLLEFISLSSTTVSLALVNALARDLNLPAALPDAPKM HARSNRTLLMGSRWSRRQSGFAPRRLPHSTRNTAGSLRYGHGTSKRGWEG GPSKLLRIGTGVGVGDCQVGGSRKRPVLAGEPVVQKVQVGFGDGEGGDGG GEGGDGGGGGRVGYGGRELLVELVNGIVRLWPAVPVR* back to topmRNA from alignment at H-paniculata_contig1618:4052..17477+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1618.3561.1 ID=mRNA_H-paniculata_contig1618.3561.1|Name=mRNA_H-paniculata_contig1618.3561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13426bp|location=Sequence derived from alignment at H-paniculata_contig1618:4052..17477+ (Halopteris paniculata Hal_grac_a_UBK monoicous) TCACGGGTCAGCCCAGGATGCCCGAACGTGGCCCGTTCCTGCGGCTTGAA
GCTACGAAACCCCTGCCACGCAGATGTTCTGCAGCCTGAGCAATCGAGGT
TTCGCCGACGATGGAGCTCTTGTGTCTGCTCCCACTGCCCGTTCTCTCGA
CGATGCCGTCCCCGGCGTCTTATGCTGAGAGCTCAACTCCACGAGATAAA
GGGACGTCTATCTCCTTCCCAACTATTTTTACCGTCGGGATAAGGGAATC
CGGAACAGGGGGTTGTGGTGTGGTGTGGGTGCGCGTCAACATCTAATGCA
CAGAGTCGCAGCCCATAAAATTCAAAAATTCAAACGAAGAAATCGGATTC
AGTGCAAGGGGCCTGGGCAGGGCCGAACCCAAGAGTGCTGGGGCAATGGA
GTGATGTGATGCAGAAAAAACCAAGCCGACCGCATAGATCGAGGTTAATC
TTTTACCTATGCTGTACCCCCCGACTACTGAGTACCAAGAAGAGATGGCA
CAGTAAAAGTAACGGCAATAACAACAGCAGCAACGCAATCTCTCTCCCTG
TTCATGTGTGTGCTCCGTCGACTTGTCTCCCACCATCAAGAAACTGGACC
CCTATTTCGGTATATTGTAGCATTCCCCAAAACCAATCTGATCCCGTTAT
ACTTGTAGGCATGGGTCATTCACTCCACACCTTCACCAACAGCATAGCAG
AAAATGAGTGCGACATGTGATGCATCCGGTTGCCATGAGCCTGCTACACA
ACGGTGCTCTCGCTGCAAGTGAGTGGATGAACCACAGAATTGCGTCTCCG
ACTTGCGCTGTCTGTCAACTCTTATAGCTCTGTATAGAAGTAACAGTGCT
CAACAGAACAAAGTACGAGTACTTGCACAGGATTGCTGAAGTGCGACCAT
GTCAGCGCGCGTGTGTGTTCGACCAGTCAAGGAGTTTCAGCTGGGGTGTG
TTTTATTTTGTACAGCCGGCATTTTACCACAGTTGATCTGCAGTGTATAT
GTATGTCTATCTCCCTCTCGTTTTCCCTCTCTGTCTGCTTTTGTTTCTCT
TTGATGGACCTGGTCTGGACATTGGTGATGATATGATCTTACCGTCGTTT
GCTCTCTCTGTCTGGATATATCCTGACCTCGACCGTGGACAGCTCCCAGG
ATTGTTGGTGGTGGATGACTACTGCTGCAAACATATGTTATGACTGTCGT
ATTATTTATATTTTCTGTGCCGTGTATATGAGATGCCCTGCGCTCCCGAA
GTCTCTTGAGTGCTATTTCATCTGCTGAATGCAAACCGTCTGTCGCTCGA
TTCTCTAACCATCCTCACACAGAGCAGTGTAAACCACGGTGAACACCTCA
AATTACCGTTATCCCTGTTCCATTAAAATACCCCCGCGCCCATGCGCTGC
ACCGACCATTCAATGTTTGACCGCTACCGAAAACCGTACTCCGTCTTCAG
GTTGCCCCGATTTGCCTCCAACGATTCTTACATAAAACACTGCATTACGC
CCCCCTCCGTTGTTGTGTGGCATTGCGTCTCATCGGGACATACGAAGATC
TGTGCGATACTGTTGCCGCGAGTGTCAGCGGCAGCATTGGACGATGGAGC
ACAAGGACAGCTGTGCTTATCTCAGCACTCGTACGGCAATGATACATGAG
AGCGAGATACTGCAAGATACCGCACGCCAACAGAGCATGTGGGTGAACAT
GTTGACCCCTCCTTGTCCCTGTAACAACAAACACAGACTTGTCTGTGGCG
ATTCTACCAGCAACTTGATTTGCAAGATTGTTTTCGCTTGTTTTATGTTT
TTTGTCTGTTTCTTTAGTCTCGGTCGAGCTGCAGCAGTATACAGTACAGC
ATCCTCTTTGTTGGTGTCAAGCACATACTGTGTCATCCACACCGAGTTCT
TGGGAGCCCCCCTCCCCATTTCTTCTTTATATTTTAACTGATGAATGTAC
GCAGCTTTGATTTCAGCTAGACTGCATAACTTCAGCACGCGTACAACAGA
CTTGCTGTGTCTGCCACCCCGTTCACTTCTACCGGCCTGAAACGCGGCCA
TACATCGCACTGACGGTTGAAGTAGGGCACAAGAACTTGCGAACTTTCTA
TTTTATGGACGCTCGAGTCCGTTTCTTTTATAGGCATCGAGATCTTGACC
TTTTTTGGCTGTAGGATTTCACGCAGTACCATGTATCTACCCATCTTGTT
TTACTTTTGTAAAAATCAGGTTTCGAAAGCACAACTCGAACGCCAGCAGC
TGACAGACGGCTTTATCAGGACTAGGTTTTTTGTTTTTTTTCCTGCGGGC
CGTGGTCGCACACGACTGAGAGTCTAAGTTTTCAATTTTGTATGCAGCTG
TCAACCGATGAGAATAAGACATAAATGGTCCGCACTGATCGGGATACCCG
GCGCGCAGTTCGCTCGTTGTAAGCTGAAGGGCGCTTTGTTGCCTTGTACC
AACATAGAAAAGTTCTTCAGTTTAGGAGAGGATGCGAAGAACACTCCCCC
TTTGCCTACCGTCCGTGTCCATCGAGCGTCAAACGACGTGGTACATACAC
TCATGTACGTCTCTCCAAAACGTAACAAAACCGAAAACGAGAGCGAACAA
AAACGTTTCGGTTTTCGCTTCCCCAGGTGTGTTCGGAGGGCCGCAGCAAA
AAGCGTGGTAAGCAAAAAACTGACAACCCCCGCACAGGAAGACACTGGCC
CCAACACCACCGTCTCGAATATTGGCGTGAAAGTTCCCGTGCCTCCAAAA
CCACTCTTCTTGATAGCCCAAAATGTGACCCTTGGTCAGCCATGCCGTGT
GCTTCGTTTCGATTTTGAGTGTGTCAAGAACTGAAAGGGCAATGCTACTA
GTATGTGTCGAGGTGTTAAGCATCTAGTGGGACTGTCTATTGGGAGAATC
TGAGATTCCTGCTGTACGCGATGAAAGGTAAGGCACACATTTTTCACCGC
ACCTTCGTCACAATGTCACAGTTGTGAACAAAAAATAACGTGGCGCTGAT
CGATTCGCCTTAATTTTTCGTTCTCGAGATTGACTTGGAGTTAGAGGAGC
TTCCCCGAACAGAAAAATGAGTTTGGTGTTTTTCATACCCCGTGCGGATT
AGTCATAGCCGAGTTTATTTTCATTTTTAGAGCCGTTATATTTCGCAAAA
TGAGTTCTATTTCAATACCGTGAAACAACTATGAACAGAGTATATAAGTT
TCGCTCGCTGACACCACAGATGCACGTCTCGGCATCCCAAGGGAAACTCC
GTTAGCGTGGGCCCACTTGAAAATGCTGAGATACTGCCACTTTTCACCTG
TAGCCGCCGCGTGTTGGTTAACATCAAACCTGGTCGGAGGTAGCTACTGG
GACATATATATCGACGTGACGACCTGCTGCCACCGTGCAGGTGCCTATCG
TCAAGTGGGCAGCCAATATCTTGCGCTTGCTTCTTTGTGGTGGAAACTCG
CAGCAACGACGGACAGGGTATTCCGCTCCCAGTCCTCAGGCCAGGCTACC
TGAAAACAAAACCGTGACTCGTTCTCGAGGATGGCCACATCGCCCTATTC
GACAGCACATTGAAGTGCCAAGTCATCGTTCGCAGACGTCTCTTTCTCTA
GATACTTGATGGCATCAACGTGTCCAACGTCCGCGGCAGAAATATAGTAC
AGTTGTCTCTCGCGTGCTGTTGAATTGAAAATGGCAACCGAATGGCCATA
TCCTGATCCAGCATGAATTACCGGGCGCGCTGCAACCCGCGCAGGTGTCC
CGCAAGGATAGTGTTGTTTCCCGATCAGTGCTGGCCGAATTCTGCAGCCC
GAAGCCAGTTTTCCTCACCCTAGCATGGAGTGAGCAGCTTGATGCGGCCA
TGTATATACTACCATTGTGGCGCAGGGTAATCGCAGCGTGCGGTAAGCGC
CTCATTTGACCATAAACCGTACCCTCTGGTGCCCGCTCTTCCGTCGTGCG
GGAGAAGGCGGTAACCCGCATATTGCAGCCCTTAAGTACAAGCACTACCG
GAAGAATTTTTTCGATTACCCGCCGTGTGGTGTGTCGAGATTTTCGAACC
AAAAATCCTGCATTTGTACCGGATCCGTGTCGCTCATACATGTTGCAATT
GACTCTGTTTTAATCCCATGTTTTTTCTCTTTTATCGTTGTGTCGGGCAA
TGGCAGGGACTCGCGTACAGGACAGAGCATACTGACGATACTCGACTCCA
TTGTCGGGTCGCGCGTTATTCCGCCGGAAGAAGCCCCGACACCGGCAAGG
GCAAACGGTTGGGAGCTGTGCCCTGTTGTCAACATGCTCGGTGTCCCGCT
TGCTATCAAGAAGGTTTCCGCCTGCCAATGCCAGCAATGTGTGGGGTGCA
CGGCAACCCAAGACGTACCTGCGAACCAGATTGTGAGTTTTCGTTTTCGG
GCCGATTACAGCTCCCCTTGAACAACTGTATTTCTTATGACAATCGATGC
AGCGTTGGTAGCGCATAAAGCTGAACGTTGGACTCGTTCAGATTTGTATC
CTGAGGTTGAAGTAGCCTATAATGCGGTGTTTGGTCGCTATGTATTTTGT
TTGACTTCCCCTCATGTACGTTGAACAACTGTATTTCTTATGACAATCGA
TGCAGCGTTGGTAGCGCGTAAAGCTGAACGTCGGACTCGTGCAGATTTGT
ATCCTGAGGTTGAAGTACCTTGTAATGCGGTGTTTGGCCGCTATGTATTT
TGTTCTACTTCCCCTCATGTACGTTTACACGGCTTCCCCCTTTGACTTGA
CAGTCGCAGGCGTGCCGTAGGAATCAAGATGTTTGAATGTTCCTTCTGCC
GTTATATATTCATTGATCTCTCCACACCCCTAAAACATCGGGGACAACAC
TATTCAATCTTATCACATGAACCGTTTCTATTGAATTCCTAGATCGTCAA
CTATAGTGCTACTCGAATCAGAGTACACAGTAGAGTGCGAAATCGAAGAC
ATTTTGTCACTAGAGTAGCGAGCTTCCGCGTCGAGAGCACCGTGGATCAT
GCACTCGAGTGTGTTGGAAGGAAACCACTGAGCAGGAATAATGTTCTCTC
CCCACTATAGCGGCGGATGGTCATTGAATGCCAAATCAAGCGTTGAAAAT
ATAGTCTAGAGCGATCTTATACAGCGAGTGTTTGCTTCGTGCCTTTTCAG
ACATCGATCATCCCGCAAAATGTTATCCTAACACTGTATATGACAGACGG
CCTTACATCACATTGGCACCCGAACGAGTCTAGCACGACTTGTCAATGCG
ATCATGTGGAATAACACGTACGTGGCGTAGAACTAGACACAGGAGAAGGC
ATGGGCGGTCAAGCAAACGTTGTGTCTTGGCTGTCTTGTACGTGCTGTTG
GTGTTCTGTACAAAGCTGTGTATGTATACTCTTCCTTTTATTGACAGATG
CATCTGGGAAACTTGATACCTCTTGCACGGTTTATGGCGTTTCACCGTGT
TGGTCGTACTACCTGGTACGGTTACCACTCACGGCACCACGTAAAGTACG
CGGGACTCTCCAGCTATCTGTACAGCCTTATTAGTAGTGACTTCAATATT
TCTGCATGTCTCCACTGTTTTCACTGCATTCAGTATGTAGGATGATGGCA
TGAGCAACGACCAAAGTAATAGCCAGGCTACAAGTAGTACTCCGTATCTC
ACTCAGTCCACGCGTTTTTTTTTTTGTCATTTTCCCTTAGGCTACTCGTC
TAGCGATCGAGCCGCAGACTGGTCGGGCACCATTCAGATGGGCGGGTAGC
GGTACTAATCACCTTGGCACCGTGTGGGTGGCGCGGACCGACGGTCAAGC
CTTCACCTCGAAAGAGTATGCTGTAAGTGCGTCCTTGTACTGTAGCAGTT
ATTAGGGCTTACACGTTCGTGGTTGTCGAAGCTGTCATGGCGTTGGACAT
GTTGCGCTTGTCGAGGAGAGCGATTAGGTGAACGTATTGGAAGGGGGGGG
GGGAATTGAGACCATGTGAGAAGGTCTTCGTAGCATGCACACGAGTTTTT
TGTGTGCCTGTGCGTTTATTTACACCCGATCATTGTGGTGGCAGGGCTCA
GGGCTATTGGTTTAATATCCCCGCGCAGATGCTTCCAAGTCAACCTGTCT
AAGGAAGACAACTAACCGTTCGAATTTGACCGCCGAAAAAAGCAGAGCTG
TGACAAGGTAATACATTACGTTTTCTTTTCCCATTAGACATCCAGAACTT
CGGCGCCACTCGTGGGTACTCGGTTATTGATTAGATACGTTATCAATGTA
TTCGACATCGTACAAGCCACAAGGTGTTTTGTTTGTTGTTCGCGTCGTTG
TCGCACAAGGATACTGCTGAAGCGGCGACACCAATTTTACGACCAAGCAA
TGTAGACGTTCTGCACCTATGTCCGTATCTGCAGGACAAAGGCTGCTCTT
GTATATTTGTAATTCAATCGTTCCGCGAGCGATTAGATTTCGTGTAAATC
TATACCCATGTATGTACGCCCTCTCACCGTAACCTCTTGGAGACAATACC
GTGGTGAAGGCGCACCACAGCACTACAGCGAATCCATCTTGTGATCACGG
TCAGCCTATACCTGTTCTCAGTAGCTTGTCTCAACGTGCTGTACACCCGC
TATTCGGCACTTTCGCGTTTTCCCCAATGGTCACAAAACGCAGATCCTGG
ACGAGTACATTTTCAACAACATCTTCGATGTTTGGGGCTTGGATCCCCCC
GACCGCGACAGGATGCTGCCCAGCGTGTACAACAGGCAGGCGTACTCGCG
CTACTTCGCCAGCAGGATGTCCGAAGACGGCATGCGTGCCGGCTTTTGAA
GCATCTGCAAACTCACCAAAATCTAGAAATTGGTATTGTGCGCCGTTCAA
CAGTAGTTGGGTCATGGTGGCGCTGTGGGAGAGATTGGGGGGGGGTTCAT
TATGTCGACAGGAACAGGAATTGGGGGAAATAATGGCCGGTAAAGCTTCT
GTTTCCATCAACTGAGCGCACAAATAGGTTGTTTTTGCATTTGACGTTTT
GCGACGGCTTACGGGGATGCATTCATTTCATATACATCCTTTTTAAAGGG
AGGGTGCGGTTGACGTTACGCCTCCGTTCAAAGGTTCTTATTTTTTTTTG
CAGCATCAACTGTGGTGTGGGGGTATTGATAGTGTTCCACCTCATTCCCG
GTGAACGAGGCTAGGGTAAATGATACCTCTCTCGTTCCGGGGGTATGTTT
AGCTTGGAGTTTCTCGATTCTCACCACACTCTCACATTCACATTGTGCGC
CAATGCCTATTATAATTACAATTTGGGCAACAAGATTAGGATTTTTTTTT
CATGCTTTCGCTGGAAGCTAGTGTTGAAAAAAGACGACGAGCTGTTCGAG
GGGAAATTTTTAAGGAGAGGAAAATTGCTGGCGTGAGGAGGTGGTGCGTG
TATTCAAAGGCTAGCCCTAGGACGTGTAACGTAGATAGAAAGTAGAAAGT
AGAAATAGCGTAGAAGCGTTTTGTCCCACCAGTTTTTCAGCAGTTTTGCC
CAGTGTCTGCACCTAGGCTGAGATCACCAATCCCTCTGGGTGGGACTTTA
TTCGTTTGTGTTTGTGTTCGTGATGTTGCCCAGGTAGTAACTTCGTCGAG
GCGCAATTCGTACTCTTCGGTATATATATATATATGGTGGTGTAAGCGAA
GCCGCATACACAGGGCAAAGTCGGATACACATGTGCGTTGCCTTTGTCCA
CTTGATGTCCACTTGACGTCCACTTGGTGAGAGTTGTACGTTTCGATGAC
CCAGATTATATTGTCAAAGAAGTCTTAATTTTTAGTAGTAGTGGTTGTGT
ACAGCTTTGAGCGAACTGTTGGCCGATGGGATCTGCATTCTTTTGTACGC
GCAACATCATCTGACCATATTTTTTTATGAGCAGTTAACCGCTCTGTGTG
CGTGAGGTTTTCGTGCTATCGGGAGATGAACAATACAAGTGGTGCATGGG
TTATTAATAGGGTAATTTTGTTGGGATCTTCAATTCCGCGTTTTGTGTAC
AATGCTGGTGGTGGCCTGGATGGATGTTCAAGAACCCTTTTCTTGATTCA
TGTAGGTTGATTGTATAGTATTAATAGTGGAACTTACGGGTTTTGTGCAG
CTTTTTCATCACCATTTTGCGACCAACGGGACTACTCAGCAATCTAATTT
TGATGAGAAAAATATGTTTTTGACTAACCGCATGAGGTGTCTCAATTACA
CGTACCAGTAGCACAAACGTGCAAAACCGACAGCCAGCGCACCTACTAGC
CAGGTGGCACGTCGGCAATCGATGTCGGAATGGTTTCCTCCAGATATTAT
CTCTCGAACGAGACATGAGGGTTATCTCAGCTGCACGCGGGTCGAAGATG
CAGGTGATGTTTCACTTTCATACCTCTGTCTTAGATCCCTCGAGAGCTCC
CTCGGGAAAGGTTTGGCATCACTTTCCTTGCAGGGTCTGCCTCTTGGCCT
AGCCGAGAAGATATATAGATACGTCGCCGAGAGAGGTTCGCGTATGGCTC
AGATGGAGGTTTCCCGTGCCCTGGCTCCCCTGCTGTCACGAACGGTGATA
TGCCTTGATTTCACTAACTCGGAAACGGAACATCAATCGTCGTGCAGTGG
TGGTAGCAGCTGTGGTTACAGTAACGGCTTCATCGGGGAATCTGCGCTGT
TAGAACTTGCTAACGGGTGCGGCATGGGGTTGATCCACCTAGATCTCGGT
GGTTGTCGGTTGGTGAAGAATGCTGGCGTGCTGGCGGTGCTGGCTAGGTG
TCAGAATCTGTCGTCGCTTGGATTGTCAGGACTTGATGGTGTCAGCGACC
AGGTAGGTTCAACTCAAACACTAGTCACGTCACCAACAGCAGCTGGAGTG
TGGAGCAGCACATCGTAATTATTTTTGTGCATCACATCGGATCACTCTAG
AATTTTTTGTGCTAGAACACTGCCCAGTTGTCTTTGAGTCTATCTGATGT
TTTTTTTGGCCGTGCAAGCAAACGGTCATTGTGGTGCAGCTCCCCCCAGC
CCAGAACTCACGCTCAGTTGTCACGATGTACTTGTAGTCTTCGGAAGAGT
TTTGCGTTAGTTTATTACGAAGATCATGAGAATGTATCTAGCGGTGTGTG
TAGGAGGTGTCGAAGGCGTATCCTGCAATGGATGTCCCGTTCAGATGCAT
TCATCGGTTGTGCATTCTTTCGCTATTCCCTTCCCCCCCCTCCCTCAATG
TCTGTTATCCTCGATGAGGAGGAGTGGCGCTGGTGATATTATTATTTGGC
TCAGAATCAGGACACAAATTGCATGTCGTCGCAACTTCAATTTGTTCTTG
GGTGTCTTTCCATAATCTGCAAGTTCGTGACGCAACACAAAACCGGAATC
AACCCTTTTCACAAAAAACACAAGGCCTGCTATGTACAAGCGTTCTTTGC
GTTCTGGCACAAAGTCTGACCATCCTGACCTTAGCGGTTTTTCAAACTTG
CCAGTCGAGTCGCTGCATGGAGGGCAATACGCGACTCTGCGTAGTATCAT
TGACCTATTTACTGTGGATGTGCCCTGATCCTTATCTCTCACTCGTCTCT
CGTACTGAATCCCACATATGTAAAAGTAGAAGATAGGATTTGTCTTCGAC
AGAGCCTTGTGGCAATTATGCGTTTCTGAGGGTGTTCACTTACATTACTT
CCACCCCGCTTTTTTAAGGTCATTGCGTGCGTTTGCATCAGGCTTGTACG
AGTGAGCGATTTCGATCGGGTGGTGGTGAGGTACATCTGTAGTCCACCTT
TTTTTTTTCGCGGTCCTCTCTCCATGATGTATGTGGATTCATGTTATCAG
AAGTTTCACTACTTCAATTGTATCTATTCCCCCAACATTTTTGTGGCCTT
CAATATTTTCATTTTCACCCGTTTAGCGTTTCTGGTGGTGACCGGACTGG
AACCTGTGGCCCTGTGGACTAGAATTAGGCACATTATCTCTTCGTGTCGC
CAATGTGAAAGTAGAGTTTGTCCTCGACGGAGACTTGTGGGAATAATGCC
TTTCTAAGGGTGTTCTCCACAATAATATATTTTATTATGTTGACTGCCTG
TGTTTCCGTTCAACTTGCTTTAGTTTATCTGTGTTGGATTGCTTCTTATC
CAACCTCATGCTCTTCCACCGGGTATTATGCACTTTTTAGTTCGTATTTT
TCCCGTGCCCCCGTCCGTCCTACCAGGCGTTATATTTGATTCCTCATCAG
ATCCCTTACCTAACGAAATTGAACTTGGCGGGCTTGAGTGGAATAACCGC
GAGTGGGATCGCATACCTTTCCTTCTTGCCCTCCCTCGAGCATCTCAACC
TGGCGAGGTGCTGTCAGGTGCGCCATATGACATATGATTTTCCTGGACAT
ACTGCGACCCTAAGCCGGTGTTCCAGATCTTACGTCAAGATACTTCATGG
CTTTGTTCTTGTGCTAGCTTTTCCGATGCCGGCATAGCGTTTTTGGCGGA
TCTCCCGAGCAGGAACGCCGACCAATGCTAGCCCTTAGATTTTGACTCGG
TAACTAAGAACGGCTGAGGTCATTTGTTGAACAAGCGCTGCCCACAGTAC
GCAATGCTCTTGCTTTCTTCATTCGTGTGCTTGCACCCACTACGGTATCT
AGGGCCCCCTCCAAGACTTGGAATTTGATTTTGACCGATTTTTCTTCATT
CGGGCTGTTCTAAACGTATACGTTTTCCCCCCCTTTTTCCCGTTTTTTTT
TACCATGTCGAATTTTTCGAAATATCAAAAACAAAAATGTACTATCTCTG
CCTACAGTGTTCCCTTTATCCCTCTGGCGCCATGCCAAATTATTGCCGAG
CATCTGAAGTTGACAATCCAGGTATCTTGGGGGGGGGGGGGTGGCATATG
AAAAGGGGGAGGGGACATCTACCCGGGATCGGTGAATATTGGAAGATGGC
CAATACAATGTGCATAGACGAACCACAAGTGCACTGTCGTTAGTTGTGTT
GTTCTCGTCATTTCTTTTTCGCTGAACCGATACAACGGTATTTTCCTGAA
AACATCCTACATCCTAGGGCAACACATCATCACCTCTGTCTCCCCCGATC
TCAATCTATTTCTCCCTATCGTCGGCTGTCTGTATTTTACACTCAGACTT
CTGCCTGTTCTAAATTATGACGTATACTATGTCTACCAGGCCGGGCTCTA
TCTCCGTGTTGACCAACTTTTCGTGGCAGGCCCTCCTAGTTTCCTTTGTG
TGACTGTCGTACTTTTCCGGCAGAGCCTCCCAAGCCGCCCGTCCGTTTCC
AGGTAGCGGGGTTTCCTTCCCAGTATCTTTATATTGGCGTTGTCGTGCAA
TCCCTGAAACATTTATTCATTCCCATATGTTTGGTTATGGTTCGTCTGCG
GTTCATTTGGCAGTGTGGCACCAAAGGGGTTGAACCTACTTCAATTTTTT
TAGATTCAGCGTGTTATGGACGTAATTGAAAAAAAGAGAAAAGAGGAGAG
AGAAAAAGGGGGGGAAATACCCACAGTTAGAACGCCCCTTGTGCGGATCA
ACCCTGTTGTCGTTAGTCTTCCTTTCAATAACTCACTCGTTATCATCAAC
AGATCGGTGACGAGGCCGCAGCAGCGCTGGGACGTGGAAATTGCAGCGAC
TCCCTGAGATGGCTCGACCTATCTGGCACCGCGACGACCGATGACGGCGT
ATCATCTCTTCACCACACCAAGCTCCTGGAGTTCATCTCGCTGTCCTCTA
CTACCGTCTCTCTTGCCCTCGTCAACGCCCTTGCACGAGATCTTAACCTA
CCCGCCGCTCTACCAGACGCTCCCAAAATGCACGCGCGCTCTAACCGCAC
GTTGCTCATGGGGTCCCGCTGGTCTCGCCGGCAATCGGGCTTTGCCCCGC
GCAGACTTCCCCACTCTACTCGGAACACCGCGGGATCGCTTCGCTATGGC
CACGGCACGTCCAAACGTGGCTGGGAAGGCGGACCGAGTAAACTGCTGCG
CATCGGAACCGGGGTGGGGGTGGGGGACTGCCAGGTCGGCGGTAGTCGCA
AGAGACCTGTATTAGCGGGGGAGCCCGTTGTGCAGAAGGTGCAGGTGGGG
TTTGGGGACGGGGAAGGGGGGGATGGCGGCGGGGAAGGGGGGGATGGCGG
GGGGGGAGGAAGGGTGGGATATGGTGGGAGAGAGCTCTTGGTAGAATTGG
TGAACGGGATTGTTCGGCTATGGCCCGCGGTTCCTGTGCGTTGATGTTTT
AGCCATGGCTGATCAAAGTGCGCCGCAGATGCTGGTTTGACTCCTGTCCA
GGAAAATCTTCTAGGTTCCATAGTAGAAGTGATGTTTAGCGCAGTGAGAT
GTAAATGTGGTGGGGTGTGCCTGGGGTGTTGTTGGTAATGCCCAAGCTGC
GGAGAAAATGTATATAATTATCGGTATTATAGATGAGATGGCGAAGGAAA
TTTGTACAGTTGAGGCGAAACATTTTGGCCTGTTTAGTGGGATTTTGGTT
AAATTCATTACAATGGTTTTGTTCAACAGACTGTCATGAAACCCGCGTGC
ATGGCTGGACGGGCTCTTCAGTCGTCCTTGTTGCGTGCTTCTTTTCAACG
TGGTGTCAAAAAGGACTCGCGAACGCGTGTGGAGGTTTCGAGGAAAGCGC
CAATTACGGCTGCGGGGAGGAATGTGTCAGCTGATGAGCACACGATAGTC
AAGGGGCATGGGAAAAGGTGTACATTTAGCAGGTTTGAACCAGGCAGAAT
CAGATCAGACGGTATCTGTTTGCGCTCTTATTTTTTTACTGAAGTCACGG
TGTTGCGGTTATTAGCACCCACAGTAACAGGGTTGCCTTCGAAGGAAATG
ACCAAGCGGTTATCCCGGGCCCATTGCCAAGTTGTTTGCAACATGTCACG
AATCGGATTAAGTTTTTTTCTGTCAATCGTTGTGTATTTGTAGTATTTCA
AATTTAGTGCCTAAGAGCTCGAGAGATCCGGAAGTACATTGCAGGCTTTA
CGTGACCACGAGGAAAGCTCTTGGGCCACCAGCCGTTGATAAAGAGTCCA
CGGCGTTGGGTACTCTTTATACTCCAAAGCACAAGTAACGAGAGGCAGCA
GCTGCCGATCCGGCGTCTGTGGCTGCAAAAGCGTGTTATTGCAGTACAAC
GGGATTCCTGATATAGCGGGGTCGAAATCGCTTTTCGCGGTTGCAACGTG
ATATAGTAGGGTATCCCACTTTTTAGGGACTTTCCTCAAAAGCGCAATCC
CGGGTCTGACAATCGGGATATTAATAAAAAACGGCACGACTACGCTGTCA
TTCGAAGATTGTTGAAATATATGAGGCGCATTCAAAGTTCAAAATATGCG
GCTGTAGACTTGAGCTTGCAGTGGCTCAGCCGTGCGCATCAGCAGCACAC
GTGCAATGTGCAGCAGGAGAGCTGTGTATCATTCAATTAGCCACACCAAA
AGCCCCCAATGCCCACGTGTGGCGCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1618:4052..17477+ >mRNA_H-paniculata_contig1618.3561.1 ID=mRNA_H-paniculata_contig1618.3561.1|Name=mRNA_H-paniculata_contig1618.3561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2628bp|location=Sequence derived from alignment at H-paniculata_contig1618:4052..17477+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGTCGGAATGGTTTCCTCCAGATATTATCTCTCGAACGAGACATGAGGG TTATCTCAGCTGCACGCGGGTCGAAGATGCAGGTGATGTTTCACTTTCAT ACCTCTGTCTTAGATCCCTCGAGAGCTCCCTCGGGAAAGGTTTGGCATCA CTTTCCTTGCAGGGTCTGCCTCTTGGCCTAGCCGAGAAGATATATAGATA CGTCGCCGAGAGAGGTTCGCGTATGGCTCAGATGGAGGTTTCCCGTGCCC TGGCTCCCCTGCTGTCACGAACGGTGATATGCCTTGATTTCACTAACTCG GAAACGGAACATCAATCGTCGTGCAGTGGTGGTAGCAGCTGTGGTTACAG TAACGGCTTCATCGGGGAATCTGCGCTGTTAGAACTTGCTAACGGGTGCG GCATGGGGTTGATCCACCTAGATCTCGGTGGTTGTCGGTTGGTGAAGAAT GCTGGCGTGCTGGCGGTGCTGGCTAGGTGTCAGAATCTGTCGTCGCTTGG ATTGTCAGGACTTGATGGTGTCAGCGACCAGATGTCGGAATGGTTTCCTC CAGATATTATCTCTCGAACGAGACATGAGGGTTATCTCAGCTGCACGCGG GTCGAAGATGCAGGTGATGTTTCACTTTCATACCTCTGTCTTAGATCCCT CGAGAGCTCCCTCGGGAAAGGTTTGGCATCACTTTCCTTGCAGGGTCTGC CTCTTGGCCTAGCCGAGAAGATATATAGATACGTCGCCGAGAGAGGTTCG CGTATGGCTCAGATGGAGGTTTCCCGTGCCCTGGCTCCCCTGCTGTCACG AACGGTGATATGCCTTGATTTCACTAACTCGGAAACGGAACATCAATCGT CGTGCAGTGGTGGTAGCAGCTGTGGTTACAGTAACGGCTTCATCGGGGAA TCTGCGCTGTTAGAACTTGCTAACGGGTGCGGCATGGGGTTGATCCACCT AGATCTCGGTGGTTGTCGGTTGGTGAAGAATGCTGGCGTGCTGGCGGTGC TGGCTAGGTGTCAGAATCTGTCGTCGCTTGGATTGTCAGGACTTGATGGT GTCAGCGACCAGGCGTTATATTTGATTCCTCATCAGATCCCTTACCTAAC GAAATTGAACTTGGCGGGCTTGAGTGGAATAACCGCGAGTGGGATCGCAT ACCTTTCCTTCTTGCCCTCCCTCGAGCATCTCAACCTGGCGAGGTGCTGT CAGGCGTTATATTTGATTCCTCATCAGATCCCTTACCTAACGAAATTGAA CTTGGCGGGCTTGAGTGGAATAACCGCGAGTGGGATCGCATACCTTTCCT TCTTGCCCTCCCTCGAGCATCTCAACCTGGCGAGGTGCTGTCAGATCGGT GACGAGGCCGCAGCAGCGCTGGGACGTGGAAATTGCAGCGACTCCCTGAG ATGGCTCGACCTATCTGGCACCGCGACGACCGATGACGGCGTATCATCTC TTCACCACACCAAGCTCCTGGAGTTCATCTCGCTGTCCTCTACTACCGTC TCTCTTGCCCTCGTCAACGCCCTTGCACGAGATCTTAACCTACCCGCCGC TCTACCAGACGCTCCCAAAATGCACGCGCGCTCTAACCGCACGTTGCTCA TGGGGTCCCGCTGGTCTCGCCGGCAATCGGGCTTTGCCCCGCGCAGACTT CCCCACTCTACTCGGAACACCGCGGGATCGCTTCGCTATGGCCACGGCAC GTCCAAACGTGGCTGGGAAGGCGGACCGAGTAAACTGCTGCGCATCGGAA CCGGGGTGGGGGTGGGGGACTGCCAGGTCGGCGGTAGTCGCAAGAGACCT GTATTAGCGGGGGAGCCCGTTGTGCAGAAGGTGCAGGTGGGGTTTGGGGA CGGGGAAGGGGGGGATGGCGGCGGGGAAGGGGGGGATGGCGGGGGGGGAG GAAGGGTGGGATATGGTGGGAGAGAGCTCTTGGTAGAATTGGTGAACGGG ATTGTTCGGCTATGGCCCGCGGTTCCTGTGCGTTGAATCGGTGACGAGGC CGCAGCAGCGCTGGGACGTGGAAATTGCAGCGACTCCCTGAGATGGCTCG ACCTATCTGGCACCGCGACGACCGATGACGGCGTATCATCTCTTCACCAC ACCAAGCTCCTGGAGTTCATCTCGCTGTCCTCTACTACCGTCTCTCTTGC CCTCGTCAACGCCCTTGCACGAGATCTTAACCTACCCGCCGCTCTACCAG ACGCTCCCAAAATGCACGCGCGCTCTAACCGCACGTTGCTCATGGGGTCC CGCTGGTCTCGCCGGCAATCGGGCTTTGCCCCGCGCAGACTTCCCCACTC TACTCGGAACACCGCGGGATCGCTTCGCTATGGCCACGGCACGTCCAAAC GTGGCTGGGAAGGCGGACCGAGTAAACTGCTGCGCATCGGAACCGGGGTG GGGGTGGGGGACTGCCAGGTCGGCGGTAGTCGCAAGAGACCTGTATTAGC GGGGGAGCCCGTTGTGCAGAAGGTGCAGGTGGGGTTTGGGGACGGGGAAG GGGGGGATGGCGGCGGGGAAGGGGGGGATGGCGGGGGGGGAGGAAGGGTG GGATATGGTGGGAGAGAGCTCTTGGTAGAATTGGTGAACGGGATTGTTCG GCTATGGCCCGCGGTTCCTGTGCGTTGA back to top
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