mRNA_H-paniculata_contig10031.36.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 2.090e-147 Identity = 253/462 (54.76%), Postives = 318/462 (68.83%), Query Frame = 1 Query: 37 QELKMIREKLNGAKREIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVTTELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALI--IGGYTVEDSFKCGLSTVNA----SYQEGNNFLLLPAGGNHQVKIFDTLPEGAFEDDSTPLPPMVRCPSARHLFLGTVALQRVVETLVDPLSKCVTVTGERGSGKTEIALQACVYVRERHRFDAIFFADCQGVAPALINTTVPPSPSLFFRPRPTGAPVAPASQVGLALGMPAPGPESREKLMQHLFMHPTKTGQSLTGKVVLLVLDGVDAMFEGQGGDARDSLVELLSYACRFNGRLHLLMTSEQSVVRDTNIRIQNGSEKASDSLAGNSTDPAQLLIDLKPRPFKFAELNLT-SHPGGCSHAEILKALERHPVLQQADGHPGTLV 1401 +ELKMIR KL + R+IRFR+ VA PSN RE+LN+GCRMLHYTGHG+ +FLAFES+ DR CG+MEPL V LK LFQAGGV TELVFISSCSSE SG+AFV+AGVPHVVAVK +E VTDQAAQ F FY AL+ G +TV+ +F L+TVNA + +G++FLLLP GGNH V+IFDTLPEG+F D++ P RC + G LQ+VVE LVDP++ CVTVTGE GSGK+E A+QAC YVR RH FDA+++AD + IN++V F+ P +G+A+GM PGP S E+L++ LF PT + T VLLVLD VD++FE GGDARD +++LLS C + L LL+TSEQS+ RDTN R ++GSE+ + N D AQLL+D P F EL L+ SH C+ +ILKALE H VL+ A+GHPGTL+ Sbjct: 54 EELKMIRMKLRESGRQIRFRSEVAKPSNFRELLNSGCRMLHYTGHGNNEFLAFESNDDRMCGIMEPLHVGPLKNLFQAGGVQTELVFISSCSSEASGNAFVDAGVPHVVAVKREESVTDQAAQQFAKQFYDALLSEAGSFTVQQAFDIALNTVNAHPPYARPQGDHFLLLPHGGNHDVRIFDTLPEGSFVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMKHAMATAINSSV-----WFYD--------DPCRLIGIAIGMTQPGPSSEEELVRFLFDRPT-VQEGRTCHKVLLVLDDVDSLFEA-GGDARDRVLKLLSNLCSMSEHLKLLVTSEQSLQRDTNERFRHGSERVAKVRPLNDRDAAQLLLDKVPTKFTKKELRLSLSHR--CTREDILKALEAHRVLKAAEGHPGTLL 498
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI) HSP 1 Score: 357 bits (917), Expect = 1.710e-109 Identity = 218/477 (45.70%), Postives = 292/477 (61.22%), Query Frame = 1 Query: 37 QELKMIREKLNGAKREIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVT-TELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALIIGG--YTVEDSFKCGLSTVNASY-----QEGNNFLLLPAGGNHQVKIFDTLPEGAFEDDSTPLPPMVRCPSARHLFLGTVALQRVVETLVDPLSKCVTVTGERGSGKTEIALQACVYVRERHRFDAIFFADCQGVA-PALINTTVPPSPSLFFRPR-PTGAPVAPAS------QVGLALGMPAPGPESREKLMQHLFMHPTKTGQSLTGKVVLLVLDGVDAMFEGQGGDARDSLVELLSYACRFNG--RLHLLMTSEQSVVRDTNIRIQNGSEKASDSLAGNSTDPAQLLIDLKPRPFKFAELNLTSHPGGCSHAEILKALERHPVLQQ----ADGHPGTLV 1401 +EL+ +R KL G R+I+FRA VA NL +L++GC +LHY GHG++++LAFES + CG+MEPLKVK+LK LF+ G+ T+LVFISSCSSE SG+ FV AGVPHVVAVK VTD AA+ F FY+AL G TV+ +F L+ VNA++ E + FLLLP GNH V+IFDTLPEG D++ LPP C A ++G +Q VV L+D + CVTVTG+ GSGKTE+A+QAC YVR RH F++ +ADC A A V + + P P GA S Q+G+A+G+P PGP + +L Q +F + T +GQ + VLLVLD VD++ E +GGDA+D LV LL C G L LL TSE ++ + G+E+ ++ + ++LLID PR + EL L S GG S A ++ A + HPVL++ A GHPGTLV Sbjct: 50 EELEFVRNKLRGFGRQIKFRAEVANAMNLTRLLHSGCLLLHYAGHGNDEYLAFESTTEWKCGIMEPLKVKYLKNLFRVDGIVKTQLVFISSCSSEASGNVFVAAGVPHVVAVKHNAGVTDGAAREFANVFYNALFENGGRSTVKQAFDMALNCVNATHLGAPKHEEDLFLLLPRDGNHDVRIFDTLPEGKLVDETHRLPPRPPCKKAVSSYMGPARVQHVVRLLLDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSSEDLCRQIGVAIGIPQPGPSTTNELHQFIFPN-TDSGQP--SQKVLLVLDNVDSLLE-RGGDAQDRLVHLLGDLCSMGGGGHLKLLATSEYKLLSGNEV-FHGGTERVAEVEPLETRHASELLIDNSPRDLQPEELGLQS--GGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLV 519
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI) HSP 1 Score: 340 bits (872), Expect = 1.830e-103 Identity = 212/458 (46.29%), Postives = 262/458 (57.21%), Query Frame = 1 Query: 49 MIREKLNGAKREIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVTTELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALI--IGGYTVEDSFKCGLSTVNA----SYQEGNNFLLLPAGGNHQVKIFDTLPEGAFEDDSTPLPPMVRCPSARHLFLGTVALQRVVETLVDPLSKCVTVTGERGSGKTEIALQACVYVRERHRFDAIFFADCQGVAPALINTTVPPSPSLFFRPRPTGAPVAPASQVGLALGMPAPGPESREKLMQHLFMHPTKTGQSLTGKVVLLVLDGVDAMFEGQGGDARDSLVELLSYACRFNGRLHLLMTSEQSVVRDTNIRIQNGSEKASDSLAGNSTDPAQLLIDLKPRPFKFAELNLT-SHPGGCSHAEILKALERHPVLQQADGHPGTLV 1401 MIR KL + R+IRFR+ VA PSN RE+LN+GCRMLHYTGHGS +FLAFES+ DR CG+MEPL V LK LFQAGGV TELVFISSCSSE SG+AFV+AGVPHVVAVK +E VTDQAAQ F FY AL+ G +TV+ +F L+TVNA + +G++FLLLP GGNH V+IFDTLPEG F D++ P RC + G LQ +GLA+GM PGP S E+L++ LF PT + T + VLLVL+ VD++FE GGDARD +++LLS C L LL+TSEQ + RDTN R ++GSE+ + D AQLLI+ P F EL L+ SH C+ +ILKALE HPVL+ A+GHPGTL+ Sbjct: 1 MIRMKLRESGRQIRFRSEVAKPSNFRELLNSGCRMLHYTGHGSNEFLAFESNDDRMCGIMEPLHVGPLKNLFQAGGVRTELVFISSCSSEASGNAFVDAGVPHVVAVKREESVTDQAAQQFAKQFYDALLSEAGRFTVKQAFDIALNTVNAHPPHARPQGDHFLLLPHGGNHDVRIFDTLPEGRFVDETREPPARPRCARPVPFYQGLEELQ-----------------------------------------------------------------------------------IGLAIGMTQPGPNSEEELVRFLFDRPT-VQEGRTCQKVLLVLEDVDSLFEA-GGDARDRVLKLLSNLCSKGEHLKLLVTSEQRLQRDTNERFRHGSERVAKVKPLKDRDAAQLLINKVPTRFTKKELRLSLSHR--CTREDILKALEAHPVLKAAEGHPGTLL 371
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE) HSP 1 Score: 321 bits (823), Expect = 3.840e-96 Identity = 217/500 (43.40%), Postives = 284/500 (56.80%), Query Frame = 1 Query: 37 QELKMIREKLNGAKREIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVT-TELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALIIGGYTVEDSFKCGLSTVNASY----QEGNNFLLLPAGGNHQVKIF-----DTLPEGAFE--------------------DDSTPLPPMVRCPSARHLFLGTVALQRVVETLVDPLSKCVTVTGERGSGKTEIALQACVYVRERHRFDAIFFADCQGVAPALINTTVPPSPSLFF--RPRPTGAPVAPASQ------VGLALGMPAPGPESREKLMQHLFMHP-TKTGQSLTGKVVLLVLDGVDAMFEGQGGDARDSLVELLSYACRFNG--RLHLLMTSEQSVVRDTNIRIQNGSEKASDSLAGNSTDPAQLLIDLKPRPFKFAELNLTSHPGGCSHAEILKALERHPVLQQ----ADGHPGTLV 1401 QEL+ + E L G R++ FRA VA NL ++N+GC MLHY GHG+ ++LAFES + CG+MEPLKV++L+ LF+ GG+ T+LVFI SCSSE SG+ FV AGVPHVVAVK VTD AA+ F FY ALI TV+ +F L +NA E + FLLLP G + K F + L G F+ D++ +PP C A ++G V +Q VV L+DP + CVTVTGE GSGKTE+A+QAC YVRERH FD+ +ADC A + P FF P GA S +G+A+GMP PGP + +L Q +F +P T +GQ + VLLVLD VD++FE + DA+D LV LLS C G L LL TSE ++R N + GSE + ++LL+D PR + EL L S GG S A+++ A+E HPVL++ A GHPGTLV Sbjct: 15 QELEHLLETLRGCGRQVSFRAEVANTMNLTRLVNSGCLMLHYAGHGNGEYLAFESTTEWMCGIMEPLKVEYLENLFRVGGIVQTQLVFIGSCSSEVSGNVFVAAGVPHVVAVKHNSGVTDGAAREFATVFYDALIKHEVTVKRAFDTALICINAHRCPPKHEEDLFLLLPKG---EEKSFGCCTAERLRLGRFQHAPFQEDQPFVVEHVGGKLVDETRQVPPRPPCKKAVSSYMGLVRVQFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAA-------LDACPETFFVIPNSPNGASGDSVSLEDLCRLIGVAIGMPQPGPSTANELHQFIFKNPNTDSGQPF--QKVLLVLDNVDSLFE-RDEDAQDRLVHLLSDLCSMGGGGHLKLLATSEYKLLRG-NGYFRGGSEMVATVKPLKMQHASELLMDNSPRDLQPEELGLQS--GGFSKADVVSAVENHPVLKEVLKIAGGHPGTLV 498
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI) HSP 1 Score: 313 bits (803), Expect = 1.410e-93 Identity = 202/452 (44.69%), Postives = 259/452 (57.30%), Query Frame = 1 Query: 79 REIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVTTELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALIIGGYTVEDSFKCGLSTVNASYQEGNNFLLLPAGGNHQVKIFDTLPEGAFEDDSTPLPPMVRCPSARHLFLGTVALQRVVETLVDPLSKCVTVTGERGSGKTEIALQACVYVRERHRFDAIFFADCQGVAPALINTTVPPSPSLFFRPRPT----GAPVAPASQVGLALGMPAPGPESREKLMQHLFMHP-TKTGQSLTGKVVLLVLDGVDAMFEGQGGDARDSLVELLSYACRFN--GRLHLLMTSEQSVVRDTNIRIQNGSEKASDSLAGNSTDPAQLLIDLKPRPFKFAELNLTSHPGGCSHAEILKALERHPVLQQ----ADGHPGTLV 1401 R+IRFRA VA NL +L +GCRMLH+ G G++ +LAFES +D +CG+MEPL+V L LFQAGGV TELVFISSCSSE SG A VEAGVPHVVAVK + VT GGNH V+IF+TLPEG D++ P P C A + G LQ+VV L+D + CVT+TGE GSGKTE A+QAC YVRERHRFD +ADC A +N+ S + FF PT A P +GLA+GMP PGP S ++L Q +F +P T +GQ + VLLVLD VD++ E + GDA+D LV+LL C G L LL TSE ++ + R + G+E + + ++LL+D PR + EL L S GG S A++L A++ HPVL++ A+GHPGTLV Sbjct: 7 RQIRFRAEVANIINLSRLLKSGCRMLHFAGQGNDKYLAFESGRDWNCGIMEPLEVASLSNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVT------------------------------------------------GGNHDVRIFETLPEGQLVDETHPPTPRPPCKKAVPSYKGLAGLQQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDKAA---LNSCSDKSGNPFFA-LPTCLKDSAWEDPCRLIGLAIGMPQPGPTSEQELHQFIFNNPNTDSGQPF--QKVLLVLDNVDSLLE-RDGDAQDRLVQLLCNLCSIGDGGHLKLLATSEHKLLSG-HERFRGGTETVARVEPLETRHASELLMDNLPRNLELTELGLES--GGLSLADVLTAVQNHPVLKEVLEIAEGHPGTLV 400
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: A0A4D9DD68_9STRA (SH2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD68_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.810e-60 Identity = 159/431 (36.89%), Postives = 226/431 (52.44%), Query Frame = 1 Query: 37 QELKMIREKLNGAKREIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVTTELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALIIGGYTVEDSFKCGLSTVNA-----SYQEGNNFLLLPAGGNHQVKIFDTLPE--GAFEDDSTPLPPMVRCPSARHLFLGTVALQRVVETLVDPLSK--CVTVTGERGSGKTEIALQACVYVRERHRFDAIFFADCQGVAPALINTTVPPSPSLFFRPRPTGAPVAPASQVGLALGMPAPGPESREKLMQHLFMHPTKTGQSLTGKVVLLVLDGVDAMFEGQGGDARDSLVELLSYACRFNGRLHLLMTSEQSVVRDTNIRIQNGSEKASDSLAGNSTDPAQLLIDLKPRPFKFAELNL 1302 QEL+ +R+ L + R + FRA VAT N R ++ GCRMLHYTGHG+ L FE++ G PL V+ L +LF+AGGV T+LVF+S+C SE +GHAF AGVPHVVAVK E+VTD AA++F FY +L+ G TV +SF+ G++++ A +Y E FLLLP GNH + IFD + G D TP P FLG A + +L+ P + CVT+ GE G GK+ +A +AC Y+ ER F A++ + +F P GA A +G AL + SR+ L +P + VLL+LDG+D F QG LV +L++ + HLL+T+E S+ + + ++ EK + A LL+ + PR +F E+ L Sbjct: 15 QELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFENEN----GEANPLSVEMLTDLFRAGGVRTQLVFVSACHSESAGHAFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGN-TVRNSFQIGVTSIMAEASAATYNEDKKFLLLPGDGNHDIAIFDASSQAIGGPLLDETPPPVKSTVHKPPVFFLGRNAKVQECISLLHPPQRYRCVTIRGEAGIGKSALAFRACEYMAERRMFHAMYQVSLKET---------------YFHP---GAKEALCETIGTALEVGG-ARNSRDLLRALQGTNPARR--------VLLLLDGIDR-FLTQGS----VLVPVLNFLLGRHPGFHLLLTAEGSIHDNGDGHLEKTPEKIVELGPLAEIPAAHLLVYVAPRRLRFEEMTL 408
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: W7U5S9_9STRA (Sh2 domain containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5S9_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.950e-55 Identity = 159/461 (34.49%), Postives = 229/461 (49.67%), Query Frame = 1 Query: 37 QELKMIREKLNGAKREIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVTTELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALIIGGYTVEDSFKCGLS---TVNASYQEGNNFLLLPAGGNHQVKIFDTLPEGAFEDDSTPLPPMVRCPSARHLFLG-TVALQRVVETL--VDPLSKCVTVTGERGSGKTEIALQACVYVRERHRFDAIFFADCQGVAPALINTTVPPSPSLFFRPRPTGAPVAPASQVGLALGMPAPGPESREKLMQHLFMHPTKTGQSLTGKVVLLVLDGVDAMFEGQGGDARDSLVELLSYACRFNGRLHLLMTSEQSVVRDTNIRIQNGSEKASDSLAGNSTDPAQLLIDLKPRPFKFAELNLTSHPGGCSHAEILKALERHPVLQQADGHPGTLV 1401 QEL ++ L+ A+R I FRA VAT N R++L GCRMLHYTG G L FE +++ G L ++ L ELF AGGV T+LVF+S+ SE G AF+ AGV HVVA+K +V+D+AA +F FY ++ +G TV +F+ + T E FLLLPA G H + +FD G F D+S P P C F+G VA Q V+ L V ++C+TV G G GKT +A + C Y+ ER++FDAI+ + +G A+G S E+ + L +G+ V++VLDG D F + +SLV++LSY LHLL+T+E SV+ + R+++ SEK + A +L ++ P F E+ S P + E L PV+++ GHP +V Sbjct: 94 QELGRLKHTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFE--KEKPVGETNVLSIETLTELFAAGGVRTQLVFVSARHSEIVGRAFIAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGR-TVRQAFEVASTAAVTETGVSSEDEQFLLLPADGEHDLAVFDDAEMGEFVDESPPPVPNT-CDPPPVPFVGRNVAAQEVIGLLSMVSQGNRCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMVPLRRKEYRSYEKETL------------------CKVIGAAIGFED---ASNEREIVFLLQDKHPSGR------VIMVLDGPDRFF-----NRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFDLEEM--MSRPYA-TREEAYAELAASPVIRELRGHPKAIV 515
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: A0A6H5JKN2_9PHAE (CHAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN2_9PHAE) HSP 1 Score: 179 bits (455), Expect = 2.660e-50 Identity = 98/180 (54.44%), Postives = 122/180 (67.78%), Query Frame = 1 Query: 37 QELKMIREKLNGAKREIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVTTELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALIIGG--YTVEDSFKCGLSTVNASYQE------GNNFLLLPAGGNHQV 552 QEL++IR L R+IRFRA VA NL +L +GCRMLH+ G G++ +LAFES +D +CG+MEPL+V LK LFQAGGV TELVFISSCSSE SG A VEAGVPHVVAVK + VTD+ A F FY AL+ G YTV+ +F L+ VNA++ G +F+LLP G + Sbjct: 31 QELELIRNTLRECGRQIRFRAEVANTMNLTRLLCSGCRMLHFAGQGNDKYLAFESGRDWNCGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHEANVTDEEALHFSTVFYDALLENGGRYTVKQAFDIALNFVNATHSSAPNRHAGGHFVLLPKGKKKSI 210
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: A0A0M0KAL5_9EUKA (Sh2 domain containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KAL5_9EUKA) HSP 1 Score: 171 bits (434), Expect = 1.130e-42 Identity = 154/478 (32.22%), Postives = 233/478 (48.74%), Query Frame = 1 Query: 37 QELKMIREKLNGAKREIRFRAAVATPSNLREMLNAG-CRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGVTT-ELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALIIGGYTVEDSFKCGL-STVNA-----SYQEGNNFLLLPAGGNHQVKIFDTLP----EGAFEDDSTPLPPMVRCPSARHLFLG-TVALQRVVETLVDPLSKCVTVTGERGSGKTEIALQACVYVRERHRF-DAIFFADCQGV--APAL-------INTTVPPSPSLFFRPR---PTGAPVAPASQVGLALGMPAPGPESREKLMQHLFMHPTKTGQSLTGKVVLLVLDGVDAMFEGQGGDARDSLVELLSYACRFNGRLHLLMTSEQSVVRDTNIRIQNGSEKASDSLAGNSTDPAQLLIDLKPRPFKFAELNLTSHPGGCSHAEILKALERHPVLQQADGHPG 1392 +E ++I + + A+R ++ R AT LR ++ G C LHY+GHG +L+ E + + V P LK+L QAGG+ + VF+S+C SE + AFVEAGVPHV+AV++ RV+D AA F AFY AL +G ++ +F+ G+ + VNA ++ EG+ FLL AG ++ V + LP + + S P+ P+ F+G V RV+ ++D + V+VTG G GKT +A+ A Y+ +RH F D + + DC G AP L + +V + PR P A A AS G A G P + + + P L G LLVLDGV A G A ELL F R+ L+T+ V R +Q G+EK + + + A+L+ L PRP + E+ G + + ++ L H ++ G+PG Sbjct: 378 KERELICDSMREARRNLKVRFEYATTDRLRTLVTLGQCCGLHYSGHGDPHYLSMEDGRGNAHFVRVPA----LKKLLQAGGIASLRFVFVSACFSEAAAQAFVEAGVPHVIAVRLTTRVSDLAAHAFTRAFYLALAVG-QSIRAAFEIGVQAVVNAPNVPSAHIEGDKFLLFGAGDHNAVPFPNLLPVEKWDPPYPKGSQHQQPL---PATAEAFIGRNVETYRVITGVLD--RRLVSVTGPAGVGKTAVAVAALNYLAQRHHFSDGVVYVDCAGTRDAPELAGRLRVQVGRSVVAAAVATIAPREEPPARAVTATASSTGAA-GSTDPHFADEDLALPRAAVLP------LHGLHCLLVLDGVSADLAEAAGFA-----ELLELLLSFP-RVRTLLTAVDPVNRP----LQGGAEKVLEMKPLSKHNTARLICRLSPRPLQLDEIK-----GAANAQDFVQRLASHDLVGALAGNPG 823
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Match: A0A7S0DT24_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DT24_9EUKA) HSP 1 Score: 156 bits (394), Expect = 8.910e-39 Identity = 98/265 (36.98%), Postives = 147/265 (55.47%), Query Frame = 1 Query: 40 ELKMIREKLNGAKREIRFRAAVATPSNLREMLNAGCRMLHYTGHGSEDFLAFESDQDRSCGVMEPLKVKWLKELFQAGGV--TTELVFISSCSSEKSGHAFVEAGVPHVVAVKVQERVTDQAAQLFCGAFYHALIIGGYTVEDSFKCGLSTVN--ASYQEGNN--FLLLPAGGNHQVKIFDTLPEGAFEDDSTPLPPMVRCPSARHLFLGT-VALQRVVETLVDPLSKCVTVTGERGSGKTEIALQACVYVRERHRF-DAIFFAD 810 E + +++ L A +++R R+ ATP RE L GCR+LHY GHG LAFE+ + G + L ++F G LVF+++C SE S AFV AGV HVV VK ++ D+AA F FY AL++ TV+++F+ ++V Y +G + +LLLPA GNH V+I++ +P G D ++P P + P+ LG A VV +VD S+ +T+TGE G G+ E+A+ A Y +R F D + + D Sbjct: 40 EWESLKKTLANANKKLRIRSIYATPEIFRETLTLGCRVLHYAGHGLPSALAFENGE----GATHLINRSTLNQIFAVGNSHERVRLVFVAACHSEVSAEAFVGAGVKHVVGVKRDAKLNDKAALTFTTQFYLALMVN--TVKEAFQIAKNSVANLTDYGKGESEKYLLLPANGNHDVRIYEDIPRGTMSDHTSP-PSVNNLPAVSPNLLGRGEATHAVVSRIVDQKSRVITLTGEAGIGRREVAVAASQYAVQRQIFADGVVYID 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10031.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10031.36.1 >prot_H-paniculata_contig10031.36.1 ID=prot_H-paniculata_contig10031.36.1|Name=mRNA_H-paniculata_contig10031.36.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=467bp NLLLLLLLLLLLQELKMIREKLNGAKREIRFRAAVATPSNLREMLNAGCRback to top mRNA from alignment at H-paniculata_contig10031:318..7897- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10031.36.1 ID=mRNA_H-paniculata_contig10031.36.1|Name=mRNA_H-paniculata_contig10031.36.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7580bp|location=Sequence derived from alignment at H-paniculata_contig10031:318..7897- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10031:318..7897- >mRNA_H-paniculata_contig10031.36.1 ID=mRNA_H-paniculata_contig10031.36.1|Name=mRNA_H-paniculata_contig10031.36.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2802bp|location=Sequence derived from alignment at H-paniculata_contig10031:318..7897- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |