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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1423 |
| Cds size | 972 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16146.3544.1 >prot_H-paniculata_contig16146.3544.1 ID=prot_H-paniculata_contig16146.3544.1|Name=mRNA_H-paniculata_contig16146.3544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp
MAHGNPFQEWGGGSGGGGGGGGGLGGGESFGSFQLESSSQPKPQHQQHQL
YAQPQPSPGEGGALPSAHQHFQQQTPAHADYTQGFHPPQEQGEGISANSN
AGGSGSAGGGGSASGGVDDNPFDSLFASSARRGGGGGAVEFEKLTTAVAP
SANSSLANGAVAAGGIGVGSGSNGGEAASLASVTIFQGVSGTQQQPQPPQ
QQQQQYQPQPARLEQQFQTPQQGLQPQRQPHHLQQQQTTTTTTTTTTKAA
ATAARGYSPLSATSAAATARTAAAAAAAAAKTAKPSAAGNARPLSRIRPS
FRTRAITTTTTTRCRCSRSTSQR* back to topmRNA from alignment at H-paniculata_contig16146:1493..2998+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig16146.3544.1 ID=mRNA_H-paniculata_contig16146.3544.1|Name=mRNA_H-paniculata_contig16146.3544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig16146:1493..2998+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTACTTTTCCGCGCACCCCAAAAGGGCAGCCGGCGCGTAGGGATGGCTC
ACGGAAACCCCTTCCAGGAGTGGGGTGGTGGCAGCGGCGGCGGCGGCGGC
GGCGGCGGAGGATTAGGAGGAGGCGAATCGTTTGGCTCCTTTCAACTTGA
ATCGTCCTCTCAACCGAAACCCCAACACCAGCAGCACCAGCTGTACGCCC
AACCACAACCTTCACCTGGTGAGGGCGGTGCTCTGCCTAGTGCGCATCAG
CATTTTCAGCAGCAAACACCAGCACACGCCGACTATACCCAGGGGTTTCA
TCCTCCCCAGGAGCAAGGAGAAGGCATTAGTGCCAATTCCAATGCGGGAG
GTAGTGGAAGCGCTGGCGGCGGCGGCAGCGCCAGCGGGGGTGTGGACGAC
AATCCTTTCGATTCTCTGTTTGCGTCGTCCGCAAGGCGAGGAGGAGGAGG
AGGGGCAGTCGAGTTTGAGAAACTTACGACCGCAGTGGCGCCGTCGGCCA
ACTCTTCCCTGGCGAACGGGGCGGTGGCTGCTGGCGGTATTGGTGTCGGT
AGCGGCAGCAACGGTGGTGAAGCTGCGTCACTCGCTTCGGTGACGATATT
TCAAGGCGTCTCGGGTACCCAGCAACAACCGCAGCCACCGCAGCAGCAGC
AGCAGCAGTATCAACCGCAGCCGGCACGACTGGAACAACAATTTCAAACT
CCACAACAGGGTCTTCAGCCGCAGCGGCAGCCTCATCATCTCCAGCAGCA
ACAACCGCCCACCGGCTACGCTACCGTGCAGCAGCAGCAGCAGCAGCAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACTACAAAAGCAGCAGCAACAGCCGCAAGGGGTTATTCT
CCCCTTTCAGCAACCTCCGCAGCTGCAACCGCAAGAACAGCAGCAGCAGC
AGCAGCAGCAGCAGCCAAAACAGCTAAACCATCTGCCGCCGGCAACGCCC
GGCCGCTCAGCCGCATTCGGCCATCCTTTCGGACAAGAGCAATCACAACG
ACAACAACAACACGCTGTCGCTGCAGCCGCAGCACCAGCCAGCGCTAGTG
AACAGCCGCAACCCTCGCCCGGACCCGGTGCAATCATTCCCTTCCAGCAG
CAGCAGCAGCAAAGGCCGTGGGGCCAGCAAGGTCCCGGCAAAGTTCAAGG
CAACGGCGTTGGAGCTGCGCCCGCCGGCAACGGCGTCGGAGCCGCACCCG
CTGGCAACGGCGCCGCCATCGGCTCAGCTTCCAATCCCTTCGATGAAATA
TTTTCTTCCGGCAACGTCCAGACGGCAGTGGGGACCTACAGCAATGGGGC
TTCTGCTCCCTCACCCGCAGTGGTCGCTGCTGGCGGAGCGGGGGGGTTTA
GCCGGAGCAACGGAATCGCTGCGCAGCAGGCGCAGCTGCCAGGGCAACAA
CAATGGCAGACCCAACAACAGATTAGTGGTAGTAACCCAGAAGATATATG
GTCGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig16146:1493..2998+ >mRNA_H-paniculata_contig16146.3544.1 ID=mRNA_H-paniculata_contig16146.3544.1|Name=mRNA_H-paniculata_contig16146.3544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at H-paniculata_contig16146:1493..2998+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTCACGGAAACCCCTTCCAGGAGTGGGGTGGTGGCAGCGGCGGCGG
CGGCGGCGGCGGCGGAGGATTAGGAGGAGGCGAATCGTTTGGCTCCTTTC
AACTTGAATCGTCCTCTCAACCGAAACCCCAACACCAGCAGCACCAGCTG
TACGCCCAACCACAACCTTCACCTGGTGAGGGCGGTGCTCTGCCTAGTGC
GCATCAGCATTTTCAGCAGCAAACACCAGCACACGCCGACTATACCCAGG
GGTTTCATCCTCCCCAGGAGCAAGGAGAAGGCATTAGTGCCAATTCCAAT
GCGGGAGGTAGTGGAAGCGCTGGCGGCGGCGGCAGCGCCAGCGGGGGTGT
GGACGACAATCCTTTCGATTCTCTGTTTGCGTCGTCCGCAAGGCGAGGAG
GAGGAGGAGGGGCAGTCGAGTTTGAGAAACTTACGACCGCAGTGGCGCCG
TCGGCCAACTCTTCCCTGGCGAACGGGGCGGTGGCTGCTGGCGGTATTGG
TGTCGGTAGCGGCAGCAACGGTGGTGAAGCTGCGTCACTCGCTTCGGTGA
CGATATTTCAAGGCGTCTCGGGTACCCAGCAACAACCGCAGCCACCGCAG
CAGCAGCAGCAGCAGTATCAACCGCAGCCGGCACGACTGGAACAACAATT
TCAAACTCCACAACAGGGTCTTCAGCCGCAGCGGCAGCCTCATCATCTCC
AGCAGCAACAATGGCTCACGGAAACCCCTTCCAGGAGTGGGGTGGTGGCA
GCGGCGGCGGCGGCGGCGGCGGCGGAGGATTAGGAGGAGGCGAATCGTTT
GGCTCCTTTCAACTTGAATCGTCCTCTCAACCGAAACCCCAACACCAGCA
GCACCAGCTGTACGCCCAACCACAACCTTCACCTGGTGAGGGCGGTGCTC
TGCCTAGTGCGCATCAGCATTTTCAGCAGCAAACACCAGCACACGCCGAC
TATACCCAGGGGTTTCATCCTCCCCAGGAGCAAGGAGAAGGCATTAGTGC
CAATTCCAATGCGGGAGGTAGTGGAAGCGCTGGCGGCGGCGGCAGCGCCA
GCGGGGGTGTGGACGACAATCCTTTCGATTCTCTGTTTGCGTCGTCCGCA
AGGCGAGGAGGAGGAGGAGGGGCAGTCGAGTTTGAGAAACTTACGACCGC
AGTGGCGCCGTCGGCCAACTCTTCCCTGGCGAACGGGGCGGTGGCTGCTG
GCGGTATTGGTGTCGGTAGCGGCAGCAACGGTGGTGAAGCTGCGTCACTC
GCTTCGGTGACGATATTTCAAGGCGTCTCGGGTACCCAGCAACAACCGCA
GCCACCGCAGCAGCAGCAGCAGCAGTATCAACCGCAGCCGGCACGACTGG
AACAACAATTTCAAACTCCACAACAGGGTCTTCAGCCGCAGCGGCAGCCT
CATCATCTCCAGCAGCAACAAACAACAACAACAACAACAACAACAACTAC
AAAAGCAGCAGCAACAGCCGCAAGGGGTTATTCTCCCCTTTCAGCAACCT
CCGCAGCTGCAACCGCAAGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCC
AAAACAGCTAAACCATCTGCCGCCGGCAACGCCCGGCCGCTCAGCCGCAT
TCGGCCATCCTTTCGGACAAGAGCAATCACAACGACAACAACAACACGCT
GTCGCTGCAGCCGCAGCACCAGCCAGCGCTAGAACAACAACAACAACAAC
AACAACAACTACAAAAGCAGCAGCAACAGCCGCAAGGGGTTATTCTCCCC
TTTCAGCAACCTCCGCAGCTGCAACCGCAAGAACAGCAGCAGCAGCAGCA
GCAGCAGCAGCCAAAACAGCTAAACCATCTGCCGCCGGCAACGCCCGGCC
GCTCAGCCGCATTCGGCCATCCTTTCGGACAAGAGCAATCACAACGACAA
CAACAACACGCTGTCGCTGCAGCCGCAGCACCAGCCAGCGCTAG back to top
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