prot_H-paniculata_contig16108.3532.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16108.3532.1
Unique Nameprot_H-paniculata_contig16108.3532.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: D8LCY7_ECTSI (Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY7_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.600e-42
Identity = 80/119 (67.23%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    2 EIEERVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQ------------------AAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTLQ 102
            E+EERVD+FASGLE EGLT PNPDG+KLLALYSRNRPEWIIAEQ                  AAFAHS +TVPLYDTLGPET+EFV+ QT L+TVVC+G AELRKLV +A  G+CP+L+
Sbjct:   39 EVEERVDNFASGLEQEGLTPPNPDGMKLLALYSRNRPEWIIAEQGGISYPSDSGTPIRILMKAAFAHSALTVPLYDTLGPETVEFVITQTSLTTVVCSGVAELRKLVAIADGGRCPSLK 157          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: A0A835ZFW5_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.560e-35
Identity = 68/101 (67.33%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    1 REIEERVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTL 101
            RE+  RVD  A+GLE E LT PN DG+KLL LYSRNRPEW+I EQAAFAH  VTVP+YDTLGPET+EFVV QT L  V+C G AELR+L   A  G C TL
Sbjct:   97 REVLARVDRLAAGLEQERLTPPNADGMKLLGLYSRNRPEWVIGEQAAFAHGGVTVPMYDTLGPETVEFVVAQTGLVAVLCGGEAELRRLAAAARGGACATL 197          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: W7TAS6_9STRA (Long-chain-fatty-acid--CoA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAS6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.820e-26
Identity = 58/101 (57.43%), Postives = 72/101 (71.29%), Query Frame = 0
Query:    2 EIEERVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTLQ 102
            E   R+D+ AS LEHEGL  P PDG++LL LY +N PEWIIA+QAAF     TVPLYDTLGP+ + +V+KQT L+ VVC G  EL  LV  A A +CP+L+
Sbjct:   84 EAARRIDNLASALEHEGLCPPTPDGLRLLGLYMKNCPEWIIADQAAFTLHGATVPLYDTLGPDAVGYVIKQTELAAVVC-GPQELENLV--AAAPECPSLK 181          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: A0A7S2SDD9_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDD9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.870e-22
Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    2 EIEERVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTL 101
            E+  R+D   + L       PN DG++LLA+YSRNRPEWI+AEQA FA    TVPLYDTLG +T+E+++ QT   TVVC   AE+  ++ VA A  CP L
Sbjct:   77 EVLSRIDAVHNALVTRNALPPNEDGLRLLAIYSRNRPEWIVAEQACFASGGATVPLYDTLGADTVEYILLQTGAPTVVCGTPAEVASVLAVAAA--CPRL 174          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: A0A7S2UI66_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI66_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.190e-20
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    6 RVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTLQ 102
            RVD FA+GL+   L  PN D + LL +Y +N  EWI+AE   +     TVPLYDTLGPET++FV++QT +S VVC   AEL  L      GQCP  Q
Sbjct:   86 RVDAFAAGLDRLELVQPNDDNLLLLGIYMKNCMEWILAEHGVYTIGGATVPLYDTLGPETVQFVLEQTGMSAVVCT-RAELAHLCEAKATGQCPKFQ 181          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: A0A7S1VYZ7_9STRA (Long-chain-fatty-acid--CoA ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYZ7_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.020e-20
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    6 RVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCP 99
            R+D+FA+GLE   L + N DG+ LL +Y RN  EWIIAEQ  +A   +TVP YDTLGPET++F++  T ++ VVC   AEL +L +    G+CP
Sbjct:   95 RMDNFAAGLERLSLVEKNDDGMLLLGIYMRNCMEWIIAEQGTYALGGITVPFYDTLGPETVQFMLTHTDMACVVCT-RAELPRLCSAKKTGKCP 187          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: UPI001C4D0AE8 (long-chain-fatty-acid--CoA ligase 5-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4D0AE8)

HSP 1 Score: 89.0 bits (219), Expect = 5.570e-20
Identity = 43/102 (42.16%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    1 REIEERVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTLQ 102
            R++ +R +H  SGL H+GL  PN D    + ++++NRPEWII+E A + +S V VPLYDTLGPE + F++ +  +STV+C   ++   L+     GQ P L+
Sbjct:   26 RQVSDRAEHLGSGLLHKGLK-PNSD--TFVGIFAQNRPEWIISELACYTYSMVAVPLYDTLGPEALVFIIDRAEISTVICDNQSKAETLLQTREKGQTPVLK 124          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: A0A8C4NNM3_DICLA (Long-chain-fatty-acid--CoA ligase n=8 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4NNM3_DICLA)

HSP 1 Score: 92.8 bits (229), Expect = 7.690e-20
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    1 REIEERVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTLQ 102
            R++ +R +H  SGL H+GL  PNPD    + ++++NRPEWII+E A + +S V VPLYDTLGPE + F++ Q  +STV+C    +   L+     GQ P L+
Sbjct:  110 RQVADRAEHLGSGLLHKGLK-PNPDNF--IGIFAQNRPEWIISELACYTYSMVAVPLYDTLGPEALVFIINQAEISTVLCDNQNKAETLLQTRETGQTPVLK 208          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: E6ZHZ2_DICLA (Long-chain-fatty-acid--CoA ligase n=5 Tax=Eupercaria incertae sedis TaxID=1489923 RepID=E6ZHZ2_DICLA)

HSP 1 Score: 92.8 bits (229), Expect = 7.690e-20
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    1 REIEERVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTLQ 102
            R++ +R +H  SGL H+GL  PNPD    + ++++NRPEWII+E A + +S V VPLYDTLGPE + F++ Q  +STV+C    +   L+     GQ P L+
Sbjct:  110 RQVADRAEHLGSGLLHKGLK-PNPDNF--IGIFAQNRPEWIISELACYTYSMVAVPLYDTLGPEALVFIINQAEISTVLCDNQNKAETLLQTRETGQTPVLK 208          
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Match: A0A7S2C7C7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7C7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.360e-19
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    6 RVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAHSTVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPTLQ 102
            R D   + L   G   PN +G++LLA+Y  NRPEW+I EQA +A    TVPLYDTLG +T+ +++ QT    VVC  A E++ ++ VA   +CP+L+
Sbjct:   14 RADSLHNALHARGALMPNDEGLRLLAIYCSNRPEWVIMEQACYAGGGATVPLYDTLGADTVRYILCQTESPCVVCGSAKEVQNVLDVAE--ECPSLR 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16108.3532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCY7_ECTSI1.600e-4267.23Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarp... [more]
A0A835ZFW5_9STRA3.560e-3567.33Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
W7TAS6_9STRA1.820e-2657.43Long-chain-fatty-acid--CoA ligase n=2 Tax=Monodops... [more]
A0A7S2SDD9_9STRA3.870e-2251.00Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochr... [more]
A0A7S2UI66_9STRA1.190e-2050.52Long-chain-fatty-acid--CoA ligase n=1 Tax=Attheya ... [more]
A0A7S1VYZ7_9STRA3.020e-2050.00Long-chain-fatty-acid--CoA ligase (Fragment) n=1 T... [more]
UPI001C4D0AE85.570e-2042.16long-chain-fatty-acid--CoA ligase 5-like n=1 Tax=P... [more]
A0A8C4NNM3_DICLA7.690e-2044.12Long-chain-fatty-acid--CoA ligase n=8 Tax=Dicentra... [more]
E6ZHZ2_DICLA7.690e-2044.12Long-chain-fatty-acid--CoA ligase n=5 Tax=Eupercar... [more]
A0A7S2C7C7_9STRA1.360e-1944.33Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042099AMP-dependent synthetase-like superfamilyGENE3D3.40.50.12780coord: 1..101
e-value: 8.8E-10
score: 39.7
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 1..94
e-value: 9.3E-14
score: 50.8
NoneNo IPR availablePANTHERPTHR43272FAMILY NOT NAMEDcoord: 2..101
NoneNo IPR availablePANTHERPTHR43272:SF50LONG-CHAIN-FATTY-ACID--COA LIGASE 5coord: 2..101
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 1..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16108contigH-paniculata_contig16108:5188..5493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16108.3532.1mRNA_H-paniculata_contig16108.3532.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16108 5188..5493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16108.3532.1 ID=prot_H-paniculata_contig16108.3532.1|Name=mRNA_H-paniculata_contig16108.3532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
REIEERVDHFASGLEHEGLTDPNPDGIKLLALYSRNRPEWIIAEQAAFAH
STVTVPLYDTLGPETIEFVVKQTLLSTVVCAGAAELRKLVTVAGAGQCPT
LQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042099AMP-dep_Synthh-like_sf
IPR000873AMP-dep_Synth/Lig