mRNA_H-paniculata_contig1607.3516.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1607.3516.1
Unique NamemRNA_H-paniculata_contig1607.3516.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: D8LKU4_ECTSI (Formin-like 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKU4_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 2.150e-111
Identity = 316/692 (45.66%), Postives = 389/692 (56.21%), Query Frame = 3 
Query: 2235 CSPLKS----------YIGKGAPGCATLTSPGTPSRKRMSVPMLNLHWDVLPAATIEKTIWGRNKGKVGEGGADACHGAGNMGSECLPEMVGDEEVEELKQLFCKKP---------NGLMSPRATPRGGAGRXXXXXXXXXXXXXXXXXXXXXXXXGARGAFFGDAFPAATPRGKKKKVLLLDVGRGNNVAIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQF-SSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIVRNLAAKEXXXXXXXXXXXXXXXXVESKTPGSKACP---SGAWSWGARPGC---------VRAASTNALCSGDTPDGERAAAPPRRGLST--SISPPRPARRAWSSTRTTTTISGAGAGGRAARREAANKAMKVEVLDLEAELGHVQRASKVPLGEILVDVRQAKRGLKQAVEELQLMLEEKEMEGKEDGGGGSSIGL--------ANGTGVLEEGRSSALQTMAAGSVAVVTTAAVLGGSDDVRSQSRMENITGTGGEETDGIRKLAVFIETAKARLGVVEKTAERCMTLCKDLGELFGEDVKDDGLQSSAHIFRTLVQFLDLLAEAKKVEGL 4184
            CSPL S          + G  A G     +P TP+ +R S P+LN HWDVLP A IE+T+W + +            G    GS      V D EVEEL++LF KK           G    R T   G G         XXXXXXXXXXXXXXXX                 G+ KKV LLDV RGNNVAIGLK+F+  G V+ELA ++  +DPK +L+TEDLQRLE CLPT  EL+TV+ + GP   LG AE FFRAL  TPRPASKVS +LFS QF  S+   A++R+ETL  AC+E   SDRLA +L++VL IGNLLNEGTY+GNACGFR++SLLKLSHTKSH+DKKTTVLHY+VR  AAKE  XXXXXXXX      ++SKTP   +     S AW  GA PGC          RA+      SG +      AA P  G S   +++P R      S+ R  +       G R     AA +  +VE LDLE+EL HV++ASK P+GEI++DVRQA++GL+QA EEL   L E+                        +  + V E   SS+L   A GS            S  +  +  +E      G  + G+RKLA F+E A+ARL  +E+ A  C+ LCK LGE FGE   DD  QS AHI RTLV F+DLL EAKKVEGL
Sbjct:  958 CSPLDSISSCRSEGGGFFGGRAGGSVPPPAP-TPTLRRTSKPLLNFHWDVLPPAKIERTVWAKRRTXXXXXXXXXXXGREACGSPRTTLSVDDAEVEELEKLFSKKTAKXXXXXXXXGQGGRRVTLGAGTGGPGLGGAAVXXXXXXXXXXXXXXXXXXXXXXXXXG-------GRVKKVSLLDVNRGNNVAIGLKAFRRVGDVSELARLVSGLDPKEVLTTEDLQRLEGCLPTAQELRTVMAFSGPAAALGSAETFFRALRDTPRPASKVSAVLFSRQFLGSVAGDAESRVETLRMACEEAMESDRLAAVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYMVRTFAAKERAXXXXXXXXASGKT-LKSKTPPRSSAEKQRSAAWPGGAPPGCRGSGMSGGGTRASGVRREVSGTS----SGAASPGAGASQRGAVTPAR----GGSAVRANSGYLLRAGGKRRGSPAAAVQLTRVEALDLESELKHVRQASKTPVGEIMIDVRQARKGLRQAKEELDRTLVEEXXXXXXXXXXXXXXXXXXXXXXXXSRPSDVSERSCSSSLSPAARGS-----------SSSSLSREGEIE------GGSSAGVRKLAAFVEEAEARLSSIEQRARACIGLCKGLGEFFGEG--DDEAQS-AHILRTLVDFMDLLEEAKKVEGL 1612
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: A0A7S1GAF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAF2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.860e-28
Identity = 99/319 (31.03%), Postives = 154/319 (48.28%), Query Frame = 3 
Query: 2313 KRMSVPMLNLHWDVLPAATIEKTIWGRNKGKVGEGGADACHGAGNMGSECLPEMVGDEEVEELKQLFCKKPNGLMSPRATPRGGAGRXXXXXXXXXXXXXXXXXXXXXXXXGARGAFFGDAFPAATPRGKKKKVLLLDVGRGNNVAIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIVRNLAAK 3269
            +R SV  L LHW+ LP   +++++W                 A    ++ + +M  D +++ L+ +F        +P A P                              GA  A    A  AATP+ +     LLD  R NNV+IGL  F+     T +   I  +D +  L  + L+++   +PT  E++ V  Y G +  LGPAE +F +     R  +KV   L+  +F+ I E+    +E LS AC++V  S+RLA +L  +L IGN++N GT +G A GFRL SL KL+ TK+  D+KTT++ Y+V  L +K
Sbjct:  593 RRTSVQTLKLHWNTLPQEKLQRSVW-----------------ATPRSNQAITDM-NDADIKNLEAMF------RSAPAAKP-----------------------------GGAAAAQARAAKKAATPKVES----LLDFKRANNVSIGLAQFRRFPSHTAVFSAIYRLDGEA-LPPDKLEQMLELMPTSAEVRLVQAYKGDVARLGPAERWFHSAGAIQRLKAKVEAALYRARFAEIDELVSGHVELLSSACEQVMKSERLASVLMSILAIGNIMNSGTDQGEAQGFRLDSLPKLTATKA-VDRKTTLIDYLVTTLESK 852
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: A0A7S2SJ18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ18_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.720e-26
Identity = 108/345 (31.30%), Postives = 151/345 (43.77%), Query Frame = 3 
Query: 2247 KSYIGKGAPGCATLTS------PGT-PSRKRMSVPMLNLHWDVLPAATIEKTIWGRNKGKVGEGGADACHGAGNMGSECLPEMVGDEEVEELKQLFCKKPNGLMSPRATPRGGAGRXXXXXXXXXXXXXXXXXXXXXXXXGARGAFFGDAFPAATPRGKKKKVLLLDVGRGNNVAIGL---KSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIV 3251
            K  I   A G AT T+      PGT P + R +  M+ +HWD LP   +E T+W                     GS C    +  EE+++L+ LF  KP   +                                                 A+  GKKK V LLD  R NN+AI L   K+F+  G    L + +   D    L+ + L  L   LPT  E + V  + G L+ LG AE F  ++   PR  +++    F L F +  +    R   +  A  E+  S+ LA IL ++LVIGN++N+GT +G A G  LASLLKL HT+  ADKKTTVL Y++
Sbjct:  205 KIKIFSAAHGVATRTTSKRRAPPGTAPPKDRRASNMITVHWDALPQERLENTVWA-------------------TGSSC---ELQSEELQQLESLFTAKPTKQVVKAV--------------------------------------------GASTAGKKKAVALLDGKRANNIAIALAQFKNFERDGDWGALCEAVMRQDESD-LNVDKLDALTDNLPTDAEARKVGGFRGNLKELGKAERFVFSIQEYPRFQARLDAFSFKLHFQARAKSLLERAGIVESAAMEIKQSEGLAFILKQMLVIGNIMNQGTRQGQASGITLASLLKLIHTRG-ADKKTTVLDYVI 481
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: A0A6U5HT13_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HT13_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.190e-26
Identity = 102/306 (33.33%), Postives = 138/306 (45.10%), Query Frame = 3 
Query: 2331 MLNLHWDVLPAATIEKTIWGRNKGKVGEGGADACHGAGNMGSECLPEMVGDEEVEELKQLFCKKPNGLMSPRATPRGGAGRXXXXXXXXXXXXXXXXXXXXXXXXGARGAFFGDAFPAATPRGKKKKVLLLDVGRGNNVAIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYI 3248
            ++NLHW  L +  +E +IWG+        GA   HG+ + G E     V + ++  L+QLF KK        A  + G G+                        G+ GA             KK    L++  R NNVAI LK+FK       L   I  +DP   +  + +Q L   LPT  EL+ V  Y G    L PAE FFR +    R   KV  +          E    +   L+   Q+   SDRL ++L+ VL IGN++NEGT KG A GF++ SLLKL+ TKS  D K TVL YI
Sbjct:   72 LVNLHWTKLDSERLENSIWGQV-------GAKKKHGSESSGDEGSVTTV-EADISTLEQLFRKK-------NAATKRGQGK------------------------GSAGA-------------KKGSAKLVEANRANNVAISLKAFKDFEQPAGLVSAIADLDPDRKIVGDRIQFLRNMLPTAQELRDVAKYQGDGSDLLPAELFFREMLKVKRIELKVQAMHTMDILPPQTEELRQKFRILANISQQAMESDRLKQLLETVLSIGNIMNEGTMKGGASGFKMDSLLKLTQTKS-VDGKMTVLDYI 324
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: A0A1Z5JCL0_FISSO (FH2 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCL0_FISSO)

HSP 1 Score: 125 bits (313), Expect = 6.580e-25
Identity = 99/317 (31.23%), Postives = 141/317 (44.48%), Query Frame = 3 
Query: 2331 MLNLHWDVLPAATIEKTIWGRNKGKVGEGGADACHGAGNMGSECLPEMVGDEEVE--ELKQLFCKKPNG--LMSPRATPRGGAGRXXXXXXXXXXXXXXXXXXXXXXXXGARGAFFGDAFPAATPRGKKKKVLLLDVGRGNNVAIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIVRNLAAK 3269
            +++LHW  L    ++ +IW R   K G                   +++G E+ E  EL +LF KK N   + S + T  G                                                +K  LLD+ R NNVAI LK+FK A    ELA++I  +DP   +  E  Q +   LPT  E++ +  YDG  + L PAE +FR L   PR   K   L     F++   +       L   C +V  S++L  +L+ VL IGN++NEGT  G A GF+  SLLKL+ TKS +D KTTVL ++V    +K
Sbjct: 1269 LVSLHWTPLSGKDLDDSIWSRTSKKRG----------------VSTKVIGPEKTEFNELMELFQKKANTGKIRSTKKTDTGTG---------------------------------------------SEKAKLLDITRSNNVAISLKAFK-AFPFEELAEIISFLDPLRKIRGEKCQFIRDILPTSSEIRVIKEYDGSDDRLEPAELWFRHLVNIPRLEVKAHILRTMEMFNADATLLMESFVILDEVCHQVMKSEKLQELLEMVLNIGNIMNEGTRTGGASGFKFDSLLKLTQTKS-SDGKTTVLDFLVNVFVSK 1522
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: A0A1Z5K408_FISSO (FH2 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K408_FISSO)

HSP 1 Score: 124 bits (311), Expect = 1.130e-24
Identity = 99/315 (31.43%), Postives = 141/315 (44.76%), Query Frame = 3 
Query: 2331 MLNLHWDVLPAATIEKTIWGRNKGKVGEGGADACHGAGNMGSECLPEMVGDEEVE--ELKQLFCKKPNGLMSPRATPRGGAGRXXXXXXXXXXXXXXXXXXXXXXXXGARGAFFGDAFPAATPRGKKKKVLLLDVGRGNNVAIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIVRNLAAK 3269
            +++LHW  L    ++ +IW R   K                 E   ++VG E+ E  +L +LF KK N     R+T +  AG                                              K  LLD+ R NNVAI LK+FK A    ELA++I  +DP   +  E  Q +   LPT  E++ +  YDG  + L PAE +FR L   PR   K   L     F++   +       L   C +V  S++L  +L+ VL IGN++N+GT  G A GF+  SLLKL+ TKS +D KTTVL ++V    +K
Sbjct: 1265 LVSLHWTPLSGKDLDDSIWSRTSKK----------------REISAKVVGPEKTEFNDLMELFQKKAN-TGKIRSTKKADAGSG------------------------------------------SDKAKLLDITRSNNVAISLKAFK-AFPFEELAEIISFLDPLRKIRGEKCQFIRDILPTSTEIRVIKDYDGCDDRLEPAELWFRHLVNIPRLEVKAQILRTMEMFNAEATLLMESFVILDEVCHQVMKSEKLQELLEMVLNIGNIMNQGTRTGGASGFKFDSLLKLTQTKS-SDGKTTVLDFLVNVFVSK 1518
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: A0A7S2PGP2_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PGP2_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.940e-24
Identity = 95/331 (28.70%), Postives = 146/331 (44.11%), Query Frame = 3 
Query: 2292 SPGTPS---RKRMSVPMLNLHWDVLPAATIEKTIWGRNKGKVGEGGADACHGAGNMGSECLPEMVGDEEVEELKQLFCKKPNGLMSPRATPRGGAGRXXXXXXXXXXXXXXXXXXXXXXXXGARGAFFGDAFPAATPRGKKKKVLLLDVGRGNNVAIGLKSF-KLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIVRNLAAKE 3272
            +PG PS   +   S  +LNLHW  L   + E++ WG+   K                     + V D +V +L+QLF +K N        P+G                                    +   A     K K   +LD  R  N+ I L SF K+     +L + +  +DP   +  +++Q +++ LP   E K + ++ G  + L P+E F   L    R  +K+  +     F+ I     A  E L+  C+++ +S++L  +LD VL IGN++NEGT  G A GF+L SL+KL+ TKS  D K TVL YIV    AK+
Sbjct:   89 APGRPSLTKKPSRSRGLLNLHWTPLSPTSAEQSFWGKTPAKK--------------------KAVEDSDVAKLEQLFSRKKN------EKPKG-----------------------------------ANTSKALVSSKKTKTAQILDSNRAQNITITLTSFNKVFESHDDLINTLADLDPNKRICGDNIQFMKSLLPKPEEKKALQSFRGNRDHLLPSEQFLLRLVGVTRIDAKIGIIETMGNFAEITSRLSANYELLARVCKQIMSSEKLHAVLDTVLTIGNIMNEGTRAGGASGFKLESLMKLTETKS-TDGKMTVLDYIVMTFVAKD 357
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: A0A4D9BIZ1_SALSN (Formin-like protein n=4 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BIZ1_SALSN)

HSP 1 Score: 122 bits (306), Expect = 4.760e-24
Identity = 74/190 (38.95%), Postives = 113/190 (59.47%), Query Frame = 3 
Query: 2700 KKKKVLLLDVGRGNNVAIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIVRNLAAK 3269
            K  K+ L+D+ R  NV I L + K++  + +L   I ++D   +L  + ++ L    P   E++ + TY G  E LG  E FF  L   PR  +K+ T LF +QF+S +      L  ++ AC+EV  SD+L  IL ++LV+GN LNEGT +G A G+RL SLLKL+ T+S    K T++H++ ++LAAK
Sbjct: 2635 KPTKIQLIDLKRAYNVEIMLTNVKMS--LPDLMTAILSLD-NTVLDADQVENLIKFCPKKEEMELLKTYTGDPEMLGKCEQFFLELMKAPRMETKLKTFLFKIQFNSQLSDFKESLVIVNSACEEVRNSDKLKEILQKILVLGNTLNEGTARGAAVGYRLDSLLKLTDTRS-TTSKMTLMHFLCKSLAAK 2820
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: A0A6G1CJE2_9ORYZ (Formin-like protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1CJE2_9ORYZ)

HSP 1 Score: 115 bits (289), Expect = 1.080e-23
Identity = 69/190 (36.32%), Postives = 107/190 (56.32%), Query Frame = 3 
Query: 2700 KKKKVLLLDVGRGNNVAIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIVRNLAAK 3269
            K  KV L+D+ R NN  I L   K+   + ++      +D   +L  + L+ L    PT  E++ +  Y G  ETLG  E FF  L   PR  SK     F +QF S +      L T+S AC+E+  S++L  I++++L +GN LN+GT +G A GFRL SLLKL+ T+++ + + T++H++ + LA K
Sbjct:   52 KPDKVHLIDIRRANNTEIMLTKIKMP--LPDMMSAALALDDS-VLDADQLENLIKFCPTKEEMELLKNYSGDKETLGKCEQFFLELMKVPRVESKFRIFAFKIQFQSQIRDVRKNLLTVSSACEELRGSEKLKVIMEKILFLGNKLNQGTPRGQALGFRLDSLLKLTDTRAN-NSRMTLMHFLCKGLADK 237
[Close]
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Match: UPI0020092C15 (LOW QUALITY PROTEIN: formin-like protein 20 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020092C15)

HSP 1 Score: 120 bits (300), Expect = 2.280e-23
Identity = 72/190 (37.89%), Postives = 112/190 (58.95%), Query Frame = 3 
Query: 2700 KKKKVLLLDVGRGNNVAIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTVLTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARLETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKLSHTKSHADKKTTVLHYIVRNLAAK 3269
            K  K+ L+D+ R  NV I L   K++  + +L   + ++D   +L  + ++ L    P   E++ + TY G  E LG  E FF  L   PR  +K+ T LF +QF+S +      L  ++ AC+EV  SD+L  IL ++LV+GN LNEGT +G A G++L SLLKL+ T+S    K T++H++ ++LAAK
Sbjct: 1768 KPTKIQLIDLKRAYNVEIMLTKVKMS--LPDLMTAVLSLD-NTVLDADQVESLIKFCPKKEEMELLKTYTGDPEMLGKCEQFFLELMKAPRMETKLKTFLFKIQFNSQLSDFKESLVIVNSACEEVRNSDKLKEILQKILVLGNTLNEGTARGAAVGYKLDSLLKLTDTRS-TTSKMTLMHFLCKSLAAK 1953
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1607.3516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKU4_ECTSI2.150e-11145.66Formin-like 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A7S1GAF2_9STRA1.860e-2831.03Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2SJ18_9STRA1.720e-2631.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U5HT13_9STRA8.190e-2633.33Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A1Z5JCL0_FISSO6.580e-2531.23FH2 domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A1Z5K408_FISSO1.130e-2431.43FH2 domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7S2PGP2_9STRA1.940e-2428.70Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A4D9BIZ1_SALSN4.760e-2438.95Formin-like protein n=4 Tax=Salvia splendens TaxID... [more]
A0A6G1CJE2_9ORYZ1.080e-2336.32Formin-like protein n=1 Tax=Oryza meyeriana var. g... [more]
UPI0020092C152.280e-2337.89LOW QUALITY PROTEIN: formin-like protein 20 n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1607contigH-paniculata_contig1607:16783..25322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score406.0
Seed ortholog evalue4e-110
Seed eggNOG ortholog2880.D8LKU4
Preferred nameFOR1
KEGG koko:K04512,ko:K05740,ko:K11238
KEGG Pathwayko04011,ko04310,ko04510,ko04810,ko04933,ko05131,map04011,map04310,map04510,map04810,map04933,map05131
Hectar predicted targeting categoryother localisation
EggNOG free text desc.actin binding
EggNOG OGsKOG1922@1,KOG1922@2759
Ec32 ortholog descriptionFormin-like 3
Ec32 orthologEc-11_005590.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04147,ko04812
Exons10
Model size4190
Cds size2343
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929284.9923048-UTR-H-paniculata_contig1607:16782..172871622929284.9923048-UTR-H-paniculata_contig1607:16782..17287Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 16783..17287 +
1691480800.9741306-UTR-H-paniculata_contig1607:16782..172871691480800.9741306-UTR-H-paniculata_contig1607:16782..17287Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 16783..17287 +
1622929285.011354-UTR-H-paniculata_contig1607:17374..178971622929285.011354-UTR-H-paniculata_contig1607:17374..17897Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 17375..17897 +
1691480800.9865158-UTR-H-paniculata_contig1607:17374..178971691480800.9865158-UTR-H-paniculata_contig1607:17374..17897Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 17375..17897 +
1622929285.0312114-UTR-H-paniculata_contig1607:19560..201191622929285.0312114-UTR-H-paniculata_contig1607:19560..20119Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 19561..20119 +
1691480800.9957812-UTR-H-paniculata_contig1607:19560..201191691480800.9957812-UTR-H-paniculata_contig1607:19560..20119Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 19561..20119 +
1622929285.0514514-UTR-H-paniculata_contig1607:20503..206471622929285.0514514-UTR-H-paniculata_contig1607:20503..20647Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 20504..20647 +
1691480801.0082312-UTR-H-paniculata_contig1607:20503..206471691480801.0082312-UTR-H-paniculata_contig1607:20503..20647Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 20504..20647 +
1622929285.070177-UTR-H-paniculata_contig1607:20728..208441622929285.070177-UTR-H-paniculata_contig1607:20728..20844Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 20729..20844 +
1691480801.0247529-UTR-H-paniculata_contig1607:20728..208441691480801.0247529-UTR-H-paniculata_contig1607:20728..20844Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1607 20729..20844 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929285.0890439-CDS-H-paniculata_contig1607:20844..208451622929285.0890439-CDS-H-paniculata_contig1607:20844..20845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 20845..20845 +
1691480801.041697-CDS-H-paniculata_contig1607:20844..208451691480801.041697-CDS-H-paniculata_contig1607:20844..20845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 20845..20845 +
1622929285.1119363-CDS-H-paniculata_contig1607:21296..215131622929285.1119363-CDS-H-paniculata_contig1607:21296..21513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 21297..21513 +
1691480801.0567207-CDS-H-paniculata_contig1607:21296..215131691480801.0567207-CDS-H-paniculata_contig1607:21296..21513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 21297..21513 +
1622929285.1300128-CDS-H-paniculata_contig1607:21607..223681622929285.1300128-CDS-H-paniculata_contig1607:21607..22368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 21608..22368 +
1691480801.0653129-CDS-H-paniculata_contig1607:21607..223681691480801.0653129-CDS-H-paniculata_contig1607:21607..22368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 21608..22368 +
1622929285.1494846-CDS-H-paniculata_contig1607:22789..231071622929285.1494846-CDS-H-paniculata_contig1607:22789..23107Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 22790..23107 +
1691480801.073267-CDS-H-paniculata_contig1607:22789..231071691480801.073267-CDS-H-paniculata_contig1607:22789..23107Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 22790..23107 +
1622929285.1701312-CDS-H-paniculata_contig1607:23901..240861622929285.1701312-CDS-H-paniculata_contig1607:23901..24086Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 23902..24086 +
1691480801.0815716-CDS-H-paniculata_contig1607:23901..240861691480801.0815716-CDS-H-paniculata_contig1607:23901..24086Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 23902..24086 +
1622929285.189827-CDS-H-paniculata_contig1607:24461..253221622929285.189827-CDS-H-paniculata_contig1607:24461..25322Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 24462..25322 +
1691480801.0897794-CDS-H-paniculata_contig1607:24461..253221691480801.0897794-CDS-H-paniculata_contig1607:24461..25322Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1607 24462..25322 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1607.3516.1prot_H-paniculata_contig1607.3516.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1607 20845..25322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1607.3516.1

>prot_H-paniculata_contig1607.3516.1 ID=prot_H-paniculata_contig1607.3516.1|Name=mRNA_H-paniculata_contig1607.3516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=781bp
MWCFGRWRPAEYDERQPGRCRFHSCGVFAFGNNRAALAATGRGCASVVCS
HVTTVFKTSGYSRKDRPGSRRLPAAAAAAGESTSRLILPPPPLPGTLLLP
AAGARGMTSPPPPPPPLPVSKRASGLNALCSPLKSYIGKGAPGCATLTSP
GTPSRKRMSVPMLNLHWDVLPAATIEKTIWGRNKGKVGEGGADACHGAGN
MGSECLPEMVGDEEVEELKQLFCKKPNGLMSPRATPRGGAGRGAAGGATL
GDGVGGTGGGGQATGNGARGAFFGDAFPAATPRGKKKKVLLLDVGRGNNV
AIGLKSFKLAGGVTELADVIGTMDPKGILSTEDLQRLEACLPTGPELKTV
LTYDGPLETLGPAEAFFRALAPTPRPASKVSTLLFSLQFSSIVEIADARL
ETLSCACQEVTTSDRLARILDRVLVIGNLLNEGTYKGNACGFRLASLLKL
SHTKSHADKKTTVLHYIVRNLAAKENNSIAAAAAAAAAAAAVESKTPGSK
ACPSGAWSWGARPGCVRAASTNALCSGDTPDGERAAAPPRRGLSTSISPP
RPARRAWSSTRTTTTISGAGAGGRAARREAANKAMKVEVLDLEAELGHVQ
RASKVPLGEILVDVRQAKRGLKQAVEELQLMLEEKEMEGKEDGGGGSSIG
LANGTGVLEEGRSSALQTMAAGSVAVVTTAAVLGGSDDVRSQSRMENITG
TGGEETDGIRKLAVFIETAKARLGVVEKTAERCMTLCKDLGELFGEDVKD
DGLQSSAHIFRTLVQFLDLLAEAKKVEGLA*
back to top

mRNA from alignment at H-paniculata_contig1607:16783..25322+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1607.3516.1 ID=mRNA_H-paniculata_contig1607.3516.1|Name=mRNA_H-paniculata_contig1607.3516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8540bp|location=Sequence derived from alignment at H-paniculata_contig1607:16783..25322+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGTCGTCGTCCGGCCATTCGAGGCGGTTGCGCGCATGGCAGCCCCGTT
CCTATCCCAACCCATCGCCTCCAGAGATAACGTCCAACGCGGACAGGTTC
AACTAGACGATGCACTAGCTTTTCGCATGCCAGGTTCGTTGCTCGGGGGA
CGCCCTCGTGGTGCCGGTGATAGTGTCCCTGGCGGCGGCAACCGCGGAGG
TGTGGCCGCTGATCCTGGTGCCTTTCAATTTATCAACAGTGCCTCGCCTA
CTCCGATCAGCTCCGCTACAGCGTCAAGGTCCCACGTGCGCGGCGGGGCC
GTCATGAACAAAAACGGGAACGGCTGGCAGAAGCTAGGTGCAGTAAAGCT
GGCTTCGACTCCGCCCGGCTCTCGGCAGGAACGCTGTCGCCGGATCTCGT
GCTCGCCCCGGCGTACTCGCGGCGGAGACAGCTCCTCCAGGGATTGTTCC
CCGTCCTCTCTTTCCCCGCTTAGTGGAGCCGGAGGCTCCAGGCGAGGTAG
GCGGGGTCAGCGGGGATCCATACATGTCTCTCCCTGTCGTTACAAGAAGG
GCGACAGTAACGATGATGGTGATCGTGCTACTACCAGCGCAGTTTCGACG
TCTCCCAAGAGACAGAGCATGTCGGCGCTGAAGATACTCGAAGGAGCCGC
CACCACCGTGGTAGCAGCAGCTCCAGCAAATGGCGATGGTGTCGGCCGAA
GCAGCAATACCAACACCAGCACCAGCCGGAATCGGGAGGAATCGATCTCG
ACGTGCCCGAAGGTAGTAGTCGAGGGCTCTCGGATCGACCTGCGCGCTCT
TGATCGTGCGAAAGTTGGGACCAGCGACCGACCTCGAGCGTATCAGTGCG
CCGATGGGTCTATAGTTGTGTTGGGGCGTGAGAGGATGCTCAGCGTGCAA
CCGGAAGCTGGGGAATCGCCAGGCGCTGGCAAGGGGTGGGGTAGTGCGGA
GTGGAAATGGGGAGGGCTAGCGGGAGAGCAATCGCCTCCTGGTCGTAGCA
GTGGTGTGGTGACATGGGTGTTGAGGTACGCACAGCTGGAGAGCTGCTGC
GTGAACGTGTCCGCGGGGCACATGGAGCGGTCTGTCGGGGATGTTGTGGT
AGAGGTAACTGCCAGGTGATGAACTATGACTCCTGTCTGTCTGTCATGTC
TGTGCCGCTCTCCCTACTGTACTGTACTGTCTGTGTAGACTGTTCATTTC
CTATACCAAGACTCTCGATATGTAAATATTATTCAAGTTTGGTTTGCGCT
GAGCTGGCGATGGGTATTATAGCCTGTAATTCCCTCAAGGTAGCCCCTTA
CCGCAAAAGCTATGGTGTATGTATTTAATAGCTGTCAACGATGGACGAGG
ATCGCGAGATCGTTTCAAAGCTGCAGGAGCTCGCACCAGTGAAAACGACA
TATTTTTCAGAAATGTGTTGCAAATATCGTAGAGTAGGGTGAGGCCGTGA
ACGTTGATTTTATTTAGCAAACCAGGGCGCGATGTGCGTCTGTTCTCGGC
TTGTAACTTTGGGGCTCGTGGTGTATGTATTGCACCGCCCTCTCGGACGC
ATATGAAAACGTGAAGCGTTCGCGTCGATTTTTTTTCGGATATTCGCCAA
AAGTAAAAAAAAAAAATGTTTATTCGGTTCACCCTCATTCGGAGCAGTCC
GAATCAGGCTACAGTAGGGAAAGGGAGGGTCGCTGAGCTTCTTTTTTCAT
GATTTGAGCCACTTCGAGGAGCAGCTCAGCACCAATATCGTTTACCCGCT
GGATAGTATAGTCGTTCCGAATCGTGCGTTGTGCGCCGTTGAATAGGTTT
GAATTAGCTTTGATTTCACTTCTTTAACAGCCGCTTTTCGACATGGTCGC
AGTGTTAAAGAAGCAACTCGACCCCCCCCCCCGTACCTTAGCCTGACTCG
TAGAAAAAGCGTGCTCATCAAGCGAACAATTTCACTTTTCAGTTTTCGTC
GAGGTGGCTCCAAGTCTTGTTACTTGTAGTAGTCCGGGGGGATGATATAT
TACGATTATAGGTGTAGATTTTCACGGAAGCGTCGGGAGGGTAGGCTGTT
GGCAGGTTGCAGGCAGCAGCCTCATCTCATGTTACCTTGATATATTTTAG
TTGGTACTCCAGTGTTCTTTTCGTCCGGAGGTAACGTTCATAGCATGAAC
GCGCCCGCGAGCTAGAAGCAACTTCGTGAGGCGATCGATTCCATTTTTTC
AGGCGCTCTGTTGTGTGCTCTTCGTTACGGCGCTAACAATGACAAGTCCT
ATGCAGTAGTTTTATGATAGACGGGGAGTATGGATCCAGCTGAAGTTACT
TCAAAAGTGCACAAAAACTGTGTGTTTGTGTGGATTCGACTGACCTGTTT
TTGCGTCTCGGGGTCTGTCGCTGCACGTGAGCGTGAGTCGACGCCTGCCG
TCTTTGTGCAAAAAACGCTCAGGTAAACAATTGTGTGCATGGTCCTAGCT
ACATACGACGTCGTTTGAACAAGTCCGGAGCAAAGCACGGCGGACTGAAC
GATTGTGATTTATGTGGCAATGCTAAGGAAGGCGGACTACTATGGTTTGG
GTGATGATAATCGACGCAGTACAAGATGGACTGTTTAATGGCTTGCGACT
AAATGGTTGTGACGTGAGCTGTTATTGATGACTTGGTACCAGACACCCGG
TTACATTAACGTCAATTCCAAACAATGTCTCAACGTATTGAATCTTGCTT
GCTCCCTCCGCCTCTCTCTGTTCCCCCCCCGAAATTGCTACTGGACGCGA
CCACCCCTGCTGCTGCCTAAAATCGCAGGCGCTCGAAGGGCTCCAGACAG
GGGGAAGGACCGTCGAAGCGGGCTTTTTGTCTCATCAACCCATCAGACTG
TCTAGAGCTCTTGCGTGCGATCCAAGCCCGTTGGCAACCGGCTTCTTTGC
CGTTCAGCACCAGCACCGGCACCCTCACTACCCTTGGTGACGACTCCACA
GCCATACTGTCGCCCGGATCGAAGGGCCAGGGTGACCCATGTCAGTCGAG
TCAAGTAGACAGTGATGCAGTCGCGAGTGACGCGAGTCGCAGGACAAGCA
GTGCTCTCTGTGGTAGTGGTAACGATGGTGGTGGCAATGGTGATGACAGT
GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGAATTTAGTACCCCGAC
TAAGGTACAACAACTGTCGCCAGGACGCGAGCAGGATGGCGTTGTTGTTG
TATTGCCGACTGAGAAAACAGCGCTTTGGAAACCGGAAGAGGGGACCCAG
TGCGATGGTAGCGGTGATGGAACACCGAAAATGTCGCCTTTCAAAAGCAA
GGGTAACGGGGTTGTCGTGTTGGAGTCTCCTGCGAAGGTACGAAAATGGG
GGACAGGCGTCGGAACTCCTGTAACGTACCGAGAGCAGTCGCTTGGACCT
TCGTTCAATGTTTTTTCTAGTTTCTCGGTGTCAAACGTTGTTGTCGTTGT
CGTTGTCGTTGTTGTCGTCATTGCTCACCAAAGAAGCTTAAATATCTATC
CATCATCGAAGATTCGCGCCGAAAATTCGACGGTGACACGGAAACTCGGT
GTGTTCCCGAAATCATCAACAAAGATATATTTTTTTTTCTCAAATTGCTT
TGACTCCCGTGTAGTGAGGGTAAACTCAACTATCCCCGTCCGCCTCCGCC
ACCTACCCAGCTGCCTAGCATGCCTCTGCAAAATAACAAATATTAACGAA
ATGAAACACCTACTATGATAGGTCCTCCGAGATCAGCTTCGGGAGATACA
CGAAGAGCACGAGAAACACCTGAAGAAGGAGTTGAAAGCCAAGGCGAAGG
CAAGCAAAGCCAACCTTGAGCGTCGGCGCAACCGCCCGCGCAGCGTTTCC
CAAGGGCCCCACTCCGTGCGCCGACTGTGCTGTAGCCCACTTCCTGCGTC
GAGGTCGCCGGGACAACACGCAAGGCTCCAGGAGGAGGGAACCGAGGGGG
GCGCTGGGGCGGAGGGTGAGGTTGGCGATGGAGAGTTGGTAGATGCTGTG
CCGAGTGCTGCCCCCGTGGACGCAGGGATCCCAGACGTGAGTCTGTACAA
GAGCATGCTCAAAGTTTATGGACAACCGGATCATAACTTGAGAGAGTGAT
CATTGTTTAGCCTTTCCATTGTCATGGTAGGTATATATACTTGGGCTGGT
TTCTACTGTATGCTGGGGTAGATGTGGACGATGGGGGGTGCGTGCTCCGC
CGTTTTGAGGCGGGGTGTGCAGCATCATCATCACCGCGCTAATATAGGCT
CGTTCGGATCCATGTCGTTGCTTGACGGAAGGAGACTAGTAAGATACTAT
CGGAGTCTATGATGGACCGATGGCTATCTTTTACGATGTTTCGAGCTCCT
CTTCTGAAGTAAAAAAGGCTGACTTGGTCGGGAGCCAAAACCCGCGATTG
TTTTTTCTCCTTGTCAGGGCATCCATATTCCCCTCTCACATGTACGTACT
TCGTACATAACCAGTTGTTGTATGAACGACCCGCCTACCACGTTTTTTTG
TCGCTGTTCTACAGTGTGGTGCTTCGGCAGGTGGCGTCCGGCAGAGTATG
ATGAAAGACAGCCGGGCAGATGCCGCTTTCATAGTTGCGGTGTTTTCGCC
TTCGGCAACAATCGCGCAGCCCTTGCCGCCACTGGCCGCGGGTGCGCCTC
CGTCGTCTGTTCCCATGTCACCACCGTCTTCAAGACCAGCGGCTACAGCA
GAAAAGACCGACCCGGCTCACGCCGTCTACCGTAATAATCTCAAGAAGAG
TACTGCAGAGGAAGCGGTTCTCCAGAAAAAGACCACGCTAGGCGAGTCTG
CAGCATCGATTGGTGCGCCCCTTAGCGCTGCCGCCGCCGCCGCCGGTGAG
AGCACTTCGCGGCTGATCCTACCTCCCCCACCACTTCCTGGCACGCTCCT
TTTGCCCGCCGCTGGGGCTAGGGGAATGACATCTCCGCCACCGCCGCCGC
CGCCCTTGCCGGTCTCCAAGAGGGCTAGCGGGCTTAATGCTCTGTGCAGT
CCCCTGAAGAGCTACATTGGTAAAGGAGCTCCGGGATGCGCGACATTGAC
GTCGCCGGGCACACCTTCGAGGAAGCGCATGTCGGTGCCCATGCTGAACT
TGCACTGGGACGTGCTGCCGGCCGCGACGATAGAAAAGACGATATGGGGA
AGGAACAAGGGGAAGGTTGGTGAGGGCGGTGCCGACGCCTGCCACGGTGC
CGGCAACATGGGTTCAGAGTGTCTGCCGGAGATGGTGGGCGACGAAGAGG
TGGAGGAACTGAAACAACTATTTTGTAAGAAACCGAATGGCTTGATGTCT
CCGCGAGCAACGCCGCGCGGCGGTGCGGGCCGGGGAGCGGCGGGCGGGGC
AACACTAGGTGATGGTGTTGGCGGAACGGGCGGGGGTGGTCAAGCCACGG
GGAATGGTGCTCGCGGGGCTTTTTTCGGCGACGCGTTTCCGGCGGCCACG
CCACGAGGGAAGAAAAAGAAAGTGCTGTTGTTGGATGTCGGCCGCGGGAA
CAATGTGGCCATTGGGCTGAAGTCGTTCAAGCTGGCGGGTGGGGTGACGG
AATTGGCGGATGTTATCGGAACCATGGACCCGAAGGGTGAGTGAATGAGT
GGGGTGCGAGGTCTCGTTATGGGTGCTGTGTTGTGCTTATTTATTTTACA
GGATGAAGGGAAGCTGGATACTGGGTGTGGTTGAGTTGGCGCGATTTGTT
TCCGTCATCCTTTAAATAACGTATGTAAAAAACAGTTCTGTATTTTAACT
TGTCTTCTCCATTTCGGGACTGGCCGATTCTGTTTGCTCGTGGACAGGTC
GAGCCATTTGTAACTGAGAAAATTTAGAGCGACCTAACTAGATAACAAAC
AAGCTAGCCTTTGTGCGTTTTCGTTTCGTCACCGGCGATAGCACACAACA
CACGACATACCCACCCGAACAATTTCGCTCGAAGCACCTCCCGCAGAAAC
TGATCAAATTCTTTCCCGAAAAGTTCTCCCGACACCTCTTGTCGTGAATG
GATGCAGGAATCCTATCAACGGAGGATCTTCAAAGGCTGGAGGCATGTCT
ACCGACAGGGCCAGAACTCAAAACCGTGCTGACGTACGACGGCCCCCTGG
AGACCTTGGGTCCCGCGGAAGCGTTTTTCCGGGCACTGGCGCCCACACCC
CGGCCGGCGAGTAAGGTGTCGACTCTCCTGTTTTCGCTCCAGTTTTCTTC
AATTGTGGAGATCGCCGACGCGCGACTGGAAACGCTGAGCTGTGCTTGCC
AAGAAGTCACCACAAGCGACCGCTTGGCGCGTATTCTGGACAGGGTCCTG
GTAATCGGAAACCTGTTGAACGAGGGTGAGATACTATTCAAACTGACACG
AGTCGTCCTCCTATATATACATTTGTCATCAGATGATGAGGGTTTTTTTG
GATTCACTTTTTTTTGGAGCATGTCACATAACACATGATACATGATATAC
ACCCCTTTCTGAGAATGGTATGATGACACTGGTATCTTGTGATATTATTG
ATTGCACTAATGAAAATCCGTTGTGTTTTTGTGTCGTCTTCGCGATTTGG
ACGTGCAACCGTGTGTGCTTACTACTGGTAAATGTAAAATAGTTTTTTAT
GACGTATTTTTTCTCAATGCCAAAGAGAGGTATCGGTATACAGAGATGAA
TTCACTCCTAATATATAGGTTAACGCTGTACAAAATGGATGCAAGCACCT
ACCTCCTTATGACAGTACGAGGCGTACGTCTTTCGCAAAAATCGGAGGCG
GTCATTGCAGCCGGGGTTTTCTCGGGAAATGGCGGGGGGGGGGGCAGGGC
GTGTGGGCATGTCGCGGGTGGTCGAGACTCTCAGACGAGAACTGACACCA
GAACACAGCTAAAGAGAAATCGTCGCCTCCGCGATGTCACAGGCTGCGTT
TTAATCGCAGACGACATCTAGGATACTATCAGTACGTTGTGAATGCTGTA
CATACGCGCTAAATATTGACAAAGTCTGAAGTGAACGAGTATAATACCAC
AACCACCCAAACAGAGCCCGTTCGTTGATCCAGCGCTATTTTATCTATCC
TGTGGTCTCATCACGGCTGCCTTTTGATCTATCCTGTGGTCTCATCACGG
CTGCCTTTTGATCTCGCAGGTACGTACAAGGGCAACGCGTGCGGGTTCCG
CTTGGCGTCGCTGCTCAAACTCAGCCACACCAAGTCTCACGCGGATAAAA
AGACCACCGTGCTCCACTACATCGTGCGCAATCTGGCCGCGAAAGAAAAT
AACTCCATCGCCGCCGCCGCCGCAGCTGCAGCCGCAGCTGCCGCGGTAGA
ATCGGTGGAAAAAGACACGGACAAAGACACTGACACACCCTCTCCTTTCA
CCATAGCCGCTCCGAAAGACGGCACCAAACCACCAATGATAGAGGCAGCC
TCTACAGCTGAGACGGTAGTCTCGATGCTGGCGTTGTCGCCGTCGTCAGA
CGGCACTAAACCTCAGGAGGCCCCGCCTCATCCGCCGCTCTCTCCAGCTT
CCTCGGAAAGCGATACTTTCGCCCACACTACACCTTCCAGCAGAAGCACT
ATTTATCTGCCGAAACTCGTGGCTGGGTCTTCCTCCAGCAGCACGACGTC
TTTGCCGCGTGACCACCGCAACGTTACTCTAGCCTCCTTCTCTTCGGGCG
GCACCACTCACTCCGCTGCTCTGGCTAAGAAAACCCCTGGTAGCAAAGCC
TGCCCCTCTGGCGCATGGTCGTGGGGCGCACGGCCTGGATGCGTCCGAGC
TGCTTCCACTAATGCCCTCTGCTCTGGGGACACCCCAGACGGTGAACGCG
CAGCAGCTCCGCCGCGTCGCGGTCTCTCCACCTCAATCTCTCCCCCCCGA
CCTGCTCGGCGGGCATGGAGTTCTACTCGGACGACGACGACGATCAGTGG
TGCAGGTGCAGGCGGGAGGGCAGCAAGGCGCGAGGCTGCTAACAAGGCGA
TGAAAGTGGAGGTGTTGGACTTAGAGGCAGAGCTGGGCCACGTACAGAGG
GCATCGAAGGTGCCCCTTGGAGAGATATTGGTGGATGTCAGGCAGGCTAA
GCGTGGGCTGAAGCAGGCTGTTGAGGAGCTACAACTCATGCTAGAGGAGA
AAGAAATGGAAGGGAAAGAAGATGGCGGCGGCGGGAGCAGTATCGGGCTA
GCGAACGGGACCGGGGTGTTGGAAGAAGGGAGGTCATCAGCATTACAAAC
GATGGCGGCGGGGTCGGTAGCGGTAGTGACCACGGCCGCTGTTTTAGGTG
GATCCGATGACGTTAGGTCTCAGTCGAGGATGGAGAACATAACTGGTACG
GGTGGCGAGGAGACGGATGGGATTCGCAAGCTCGCCGTATTCATCGAGAC
GGCCAAGGCGCGACTCGGCGTGGTGGAGAAAACGGCCGAACGGTGCATGA
CGCTGTGCAAGGACCTCGGTGAGCTTTTTGGCGAGGACGTGAAGGACGAC
GGGTTGCAGTCATCAGCGCATATTTTCCGAACACTTGTCCAGTTCCTCGA
TTTGCTGGCGGAGGCGAAAAAAGTCGAGGGTCTCGCTTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1607:16783..25322+

>mRNA_H-paniculata_contig1607.3516.1 ID=mRNA_H-paniculata_contig1607.3516.1|Name=mRNA_H-paniculata_contig1607.3516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4686bp|location=Sequence derived from alignment at H-paniculata_contig1607:16783..25322+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATGTGGTGCTTCGGCAGGTGGCGTCCGGCAGAGTATGATGAAAGACAGC
CGGGCAGATGCCGCTTTCATAGTTGCGGTGTTTTCGCCTTCGGCAACAAT
CGCGCAGCCCTTGCCGCCACTGGCCGCGGGTGCGCCTCCGTCGTCTGTTC
CCATGTCACCACCGTCTTCAAGACCAGCGGCTACAGCAGAAAAGACCGAC
CCGGCTCACGCCGTCTACCTGTGGTGCTTCGGCAGGTGGCGTCCGGCAGA
GTATGATGAAAGACAGCCGGGCAGATGCCGCTTTCATAGTTGCGGTGTTT
TCGCCTTCGGCAACAATCGCGCAGCCCTTGCCGCCACTGGCCGCGGGTGC
GCCTCCGTCGTCTGTTCCCATGTCACCACCGTCTTCAAGACCAGCGGCTA
CAGCAGAAAAGACCGACCCGGCTCACGCCGTCTACCCGCTGCCGCCGCCG
CCGCCGGTGAGAGCACTTCGCGGCTGATCCTACCTCCCCCACCACTTCCT
GGCACGCTCCTTTTGCCCGCCGCTGGGGCTAGGGGAATGACATCTCCGCC
ACCGCCGCCGCCGCCCTTGCCGGTCTCCAAGAGGGCTAGCGGGCTTAATG
CTCTGTGCAGTCCCCTGAAGAGCTACATTGGTAAAGGAGCTCCGGGATGC
GCGACATTGACGTCGCCGGGCACACCTTCGAGGAAGCGCATGTCGGTGCC
CATGCTGAACTTGCACTGGGACGTGCTGCCGGCCGCGACGATAGAAAAGA
CGATATGGGGAAGGAACAAGGGGAAGGTTGGTGAGGGCGGTGCCGACGCC
TGCCACGGTGCCGGCAACATGGGTTCAGAGTGTCTGCCGGAGATGGTGGG
CGACGAAGAGGTGGAGGAACTGAAACAACTATTTTGTAAGAAACCGAATG
GCTTGATGTCTCCGCGAGCAACGCCGCGCGGCGGTGCGGGCCGGGGAGCG
GCGGGCGGGGCAACACTAGGTGATGGTGTTGGCGGAACGGGCGGGGGTGG
TCAAGCCACGGGGAATGGTGCTCGCGGGGCTTTTTTCGGCGACGCGTTTC
CGGCGGCCACGCCACGAGGGAAGAAAAAGAAAGTGCTGTTGTTGGATGTC
GGCCGCGGGAACAATGTGGCCATTGGGCTGAAGTCGTTCAAGCTGGCGGG
TGGGGTGACGGAATTGGCGGATGTTATCGGAACCATGGACCCGAAGGCGC
TGCCGCCGCCGCCGCCGGTGAGAGCACTTCGCGGCTGATCCTACCTCCCC
CACCACTTCCTGGCACGCTCCTTTTGCCCGCCGCTGGGGCTAGGGGAATG
ACATCTCCGCCACCGCCGCCGCCGCCCTTGCCGGTCTCCAAGAGGGCTAG
CGGGCTTAATGCTCTGTGCAGTCCCCTGAAGAGCTACATTGGTAAAGGAG
CTCCGGGATGCGCGACATTGACGTCGCCGGGCACACCTTCGAGGAAGCGC
ATGTCGGTGCCCATGCTGAACTTGCACTGGGACGTGCTGCCGGCCGCGAC
GATAGAAAAGACGATATGGGGAAGGAACAAGGGGAAGGTTGGTGAGGGCG
GTGCCGACGCCTGCCACGGTGCCGGCAACATGGGTTCAGAGTGTCTGCCG
GAGATGGTGGGCGACGAAGAGGTGGAGGAACTGAAACAACTATTTTGTAA
GAAACCGAATGGCTTGATGTCTCCGCGAGCAACGCCGCGCGGCGGTGCGG
GCCGGGGAGCGGCGGGCGGGGCAACACTAGGTGATGGTGTTGGCGGAACG
GGCGGGGGTGGTCAAGCCACGGGGAATGGTGCTCGCGGGGCTTTTTTCGG
CGACGCGTTTCCGGCGGCCACGCCACGAGGGAAGAAAAAGAAAGTGCTGT
TGTTGGATGTCGGCCGCGGGAACAATGTGGCCATTGGGCTGAAGTCGTTC
AAGCTGGCGGGTGGGGTGACGGAATTGGCGGATGTTATCGGAACCATGGA
CCCGAAGGGAATCCTATCAACGGAGGATCTTCAAAGGCTGGAGGCATGTC
TACCGACAGGGCCAGAACTCAAAACCGTGCTGACGTACGACGGCCCCCTG
GAGACCTTGGGTCCCGCGGAAGCGTTTTTCCGGGCACTGGCGCCCACACC
CCGGCCGGCGAGTAAGGTGTCGACTCTCCTGTTTTCGCTCCAGTTTTCTT
CAATTGTGGAGATCGCCGACGCGCGACTGGAAACGCTGAGCTGTGCTTGC
CAAGAAGTCACCACAAGCGACCGCTTGGCGCGTATTCTGGACAGGGTCCT
GGTAATCGGAAACCTGTTGAACGAGGGAATCCTATCAACGGAGGATCTTC
AAAGGCTGGAGGCATGTCTACCGACAGGGCCAGAACTCAAAACCGTGCTG
ACGTACGACGGCCCCCTGGAGACCTTGGGTCCCGCGGAAGCGTTTTTCCG
GGCACTGGCGCCCACACCCCGGCCGGCGAGTAAGGTGTCGACTCTCCTGT
TTTCGCTCCAGTTTTCTTCAATTGTGGAGATCGCCGACGCGCGACTGGAA
ACGCTGAGCTGTGCTTGCCAAGAAGTCACCACAAGCGACCGCTTGGCGCG
TATTCTGGACAGGGTCCTGGTAATCGGAAACCTGTTGAACGAGGGTACGT
ACAAGGGCAACGCGTGCGGGTTCCGCTTGGCGTCGCTGCTCAAACTCAGC
CACACCAAGTCTCACGCGGATAAAAAGACCACCGTGCTCCACTACATCGT
GCGCAATCTGGCCGCGAAAGAAAATAACTCCATCGCCGCCGCCGCCGCAG
CTGCAGCCGCAGCTGCCGCGGTAGAATCGGTACGTACAAGGGCAACGCGT
GCGGGTTCCGCTTGGCGTCGCTGCTCAAACTCAGCCACACCAAGTCTCAC
GCGGATAAAAAGACCACCGTGCTCCACTACATCGTGCGCAATCTGGCCGC
GAAAGAAAATAACTCCATCGCCGCCGCCGCCGCAGCTGCAGCCGCAGCTG
CCGCGGTAGAATCGAAAACCCCTGGTAGCAAAGCCTGCCCCTCTGGCGCA
TGGTCGTGGGGCGCACGGCCTGGATGCGTCCGAGCTGCTTCCACTAATGC
CCTCTGCTCTGGGGACACCCCAGACGGTGAACGCGCAGCAGCTCCGCCGC
GTCGCGGTCTCTCCACCTCAATCTCTCCCCCCCGACCTGCTCGGCGGGCA
TGGAGTTCTACTCGGACGACGACGACGATCAGTGGTGCAGGTGCAGGCGG
GAGGGCAGCAAGGCGCGAGGCTGCTAACAAGGCGATGAAAGTGGAGGTGT
TGGACTTAGAGGCAGAGCTGGGCCACGTACAGAGGGCATCGAAGGTGCCC
CTTGGAGAGATATTGGTGGATGTCAGGCAGGCTAAGCGTGGGCTGAAGCA
GGCTGTTGAGGAGCTACAACTCATGCTAGAGGAGAAAGAAATGGAAGGGA
AAGAAGATGGCGGCGGCGGGAGCAGTATCGGGCTAGCGAACGGGACCGGG
GTGTTGGAAGAAGGGAGGTCATCAGCATTACAAACGATGGCGGCGGGGTC
GGTAGCGGTAGTGACCACGGCCGCTGTTTTAGGTGGATCCGATGACGTTA
GGTCTCAGTCGAGGATGGAGAACATAACTGGTACGGGTGGCGAGGAGACG
GATGGGATTCGCAAGCTCGCCGTATTCATCGAGACGGCCAAGGCGCGACT
CGGCGTGGTGGAGAAAACGGCCGAACGGTGCATGACGCTGTGCAAGGACC
TCGGTGAGCTTTTTGGCGAGGACGTGAAGGACGACGGGTTGCAGTCATCA
GCGCATATTTTCCGAACACTTGTCCAGTTCCTCGATTTGCTGGCGGAGGC
GAAAAAAGTCGAGGGTCTCGCTTGAAAAACCCCTGGTAGCAAAGCCTGCC
CCTCTGGCGCATGGTCGTGGGGCGCACGGCCTGGATGCGTCCGAGCTGCT
TCCACTAATGCCCTCTGCTCTGGGGACACCCCAGACGGTGAACGCGCAGC
AGCTCCGCCGCGTCGCGGTCTCTCCACCTCAATCTCTCCCCCCCGACCTG
CTCGGCGGGCATGGAGTTCTACTCGGACGACGACGACGATCAGTGGTGCA
GGTGCAGGCGGGAGGGCAGCAAGGCGCGAGGCTGCTAACAAGGCGATGAA
AGTGGAGGTGTTGGACTTAGAGGCAGAGCTGGGCCACGTACAGAGGGCAT
CGAAGGTGCCCCTTGGAGAGATATTGGTGGATGTCAGGCAGGCTAAGCGT
GGGCTGAAGCAGGCTGTTGAGGAGCTACAACTCATGCTAGAGGAGAAAGA
AATGGAAGGGAAAGAAGATGGCGGCGGCGGGAGCAGTATCGGGCTAGCGA
ACGGGACCGGGGTGTTGGAAGAAGGGAGGTCATCAGCATTACAAACGATG
GCGGCGGGGTCGGTAGCGGTAGTGACCACGGCCGCTGTTTTAGGTGGATC
CGATGACGTTAGGTCTCAGTCGAGGATGGAGAACATAACTGGTACGGGTG
GCGAGGAGACGGATGGGATTCGCAAGCTCGCCGTATTCATCGAGACGGCC
AAGGCGCGACTCGGCGTGGTGGAGAAAACGGCCGAACGGTGCATGACGCT
GTGCAAGGACCTCGGTGAGCTTTTTGGCGAGGACGTGAAGGACGACGGGT
TGCAGTCATCAGCGCATATTTTCCGAACACTTGTCCAGTTCCTCGATTTG
CTGGCGGAGGCGAAAAAAGTCGAGGGTCTCGCTTGA
back to top