mRNA_H-paniculata_contig1053.348.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: D7FVJ5_ECTSI (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ5_ECTSI) HSP 1 Score: 428 bits (1100), Expect = 2.630e-139 Identity = 296/664 (44.58%), Postives = 366/664 (55.12%), Query Frame = 3 Query: 42 PDSGSVEERERGLSRKRRQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMPASSFADGNRRVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSGRPS-SGKDCDSDVTWDHAGEEAVGEPGNAIGNAAVFDEAFVLDLITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKLDGVSTRARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAMLTLPPGNIDPIVENTVGEGGNIEK-DPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWISQEPESAWPSAPANLR----RNP--CSSLEMPQQQSGENGSPAPQQLRRPVNTDRMDSDHCEPMEHYDHGSGHVDRP--MPLFGV--GGPGQS----------GVEEDP-----------------------------------------------------------------GVLPAMSGAARAVAARECKRLLDRGRVWFVQEKLGLTCELVHFVEREVTPENALLLAFRA*E 1772 P S S+EE+ R SR+RRQE+K+AQ ALKTG+W+RC +RVPGK R+CAQ R +A FC THM A+ +RVPCP+DPNH V E+ L SHVKICN Q + QPY+S+ INSG P G++ D+AFV+DL++RV AAHR+ VG++ EVLDPP+VQALHR G VG G + GH G GP L+VEMGAG+G LGQ+IATAFPGS++TM+ERSS+R KA+ +L+GVSTRARIDIRDLNM GLPSLT +G+ RPVVAVAKHLCGVATDLALRAMLTLPP +GG++ DP + P A+A T R GGVAIATCCHH C+WRDYVG++FL + GF+ARDF+AM+RISAWIS EP++ A N R R+P SS ++ GE S A + RRP R EP G G RP +G GGPG++ G ED L ++ + +AVAAR CKRLLDRGR F++E+LGL E+VHFV +VTPENALLL FRA E Sbjct: 7 PRSKSIEEQTRADSRRRRQERKKAQLGALKTGVWDRCLYRVPGKGRYCAQHRSKHSASFCGTHM--GETAEKGKRVPCPVDPNHTVFEQQLSSHVKICNLALQQARMVAQPYYSEGINSGPPLLPGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDAFVVDLLSRVEAAHRDLVGEIPTEVLDPPEVQALHR----GLVGPAGGDN--------GH----GENGPSV--LHVEMGAGKGTLGQSIATAFPGSDVTMVERSSVRRKAENRLEGVSTRARIDIRDLNMGGLPSLTA-EGDDRPVVAVAKHLCGVATDLALRAMLTLPPRP----ESRDADDGGHVGNGDPTAAP--------------------AAATT---RVGGVAIATCCHHVCNWRDYVGRDFLTQQGFSARDFEAMRRISAWISLEPDAG---ARKNNRYPDDRHPGVTSSPSFCRKTPGETASVAARS-RRPAAETRKLEPVLEP------GGGDCPRPGEREAYGWSGGGPGEAREGTWTEQLCGEREDSLERARETNRGHSSSPPWHTTPAPTFMTASTPSSLHSPTSDNANANTSIGDGSDVLXXXXXXXXXXXXLAPLTPSEKAVAARGCKRLLDRGRRAFIEERLGLRSEIVHFVGSDVTPENALLLGFRAEE 612
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: A0A6H5KUX2_9PHAE (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX2_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 6.500e-125 Identity = 287/723 (39.70%), Postives = 361/723 (49.93%), Query Frame = 3 Query: 42 PDSGSVEERERGLSRKRRQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMPASSFADGNRRVPCPLDPNHNVAERLLESHVK--------------------------ICNKTRQSKELEQQPYFSKDINSGRP---SSGKDCDSDVTWDHAGEEAVGEPGNAIGNAAVFDEAFVLDLITRVSAAHREHVGDLSMEVLDPPQVQALHR-TVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKLDGVSTRARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALR---------------------------------------------------AMLTLPPGNIDPIVENTVGEGGNI-EKDPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWISQEPESAWPSAPANLR----RNP--CSSLEMPQQQSGENGSPAPQQLRRPVNTDRM-----------------DSDHCE----------------------PMEHYDHGSGHVDRPMPLFGVGGPG---------------------QSGVEEDPGVLPAMSGAARAVAARECKRLLDRGRVWFVQEKLGLTCELVHFVEREVTPENALLLAFRA 1766 P S S++E+ R SR+RRQE+K AQ AL+TG+WERC +RVPGK R+CAQ +A FC THM A+ +RVPCP+DPNH V E+ L SHVK +CN Q + QPY+S+ INSG P G+ AV A+G AA D+AFV+DL++RV AAHR VG++ EVLDPP+VQALHR V G G G G GP L+VEMGAG+G LGQ+IATAFPGS++TM+ERSS+R KA+ +L+GVSTRARIDIRDL+M GLPSLT G+ RPVVAVAKHLCGVATDLALR AMLTLPP +GG++ DP P A+A T R GGVAIATCCHH C+WRDYVG++FL++ GF+ARDF+AM+RISAWIS EP++ A N R R+P SL P++ GE S A LR T ++ ++D C +E +G P P + + + VL ++ + +A AAR CKRLLDRGR F++E+LGL E+VHFV +VTPENALLL FRA Sbjct: 7 PRSKSIDEQTRADSRRRRQERKNAQLEALQTGVWERCLYRVPGKARYCAQH----SASFCGTHM--GETAEKGKRVPCPVDPNHTVFEQQLSSHVKRSRRVSPQAPPAAPYRTMWHVGSTTKVCNLALQQARMVTQPYYSEGINSGPPLLPGEXXXXXXXXXXXXRGDVAVVA---AVGAAADLDDAFVVDLLSRVEAAHRHLVGEIPTEVLDPPEVQALHRGLVGPTGAGGESGH---------------GEDGPSV--LHVEMGAGKGTLGQSIATAFPGSDVTMVERSSVRRKAENRLEGVSTRARIDIRDLDMGGLPSLTAA-GDDRPVVAVAKHLCGVATDLALRRDGGATDGETNREKHQAGHLPFHLLVPRHFPPWLAVLALSLRRSLPNLYRRAMLTLPPRR----ESRDADDGGHVCNGDPTDAP--------------------AAATT---RVGGVAIATCCHHVCNWRDYVGRDFLMQQGFSARDFEAMRRISAWISLEPDAG---ARKNNRYPDDRHPGVTFSLSFPRKIPGETASVAAGSLRPAAETRKLQPVLEPGGGDGPWPGEREADSCSGGGPGEAREGIWTEQFSGEGENSLERAGETNGGHSSSSPWHATAAPSLNMSASTPSSLQLPTSDNANASTSIGDGSEVLVPLTPSEKAAAARGCKRLLDRGRRAFIEERLGLCSEIVHFVGSDVTPENALLLGFRA 672
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: A0A835ZI09_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI09_9STRA) HSP 1 Score: 244 bits (623), Expect = 3.700e-69 Identity = 197/599 (32.89%), Postives = 281/599 (46.91%), Query Frame = 3 Query: 42 PDSGSVEERERGLSRKRRQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMPASSFADGNRRVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSGRPSSGKD--CDSDVTW-------DHAGEEAVGEPGNAIGNAAVFDEA----------FVLDLITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKLDGVST---RARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAMLTLPPGNI--DPIVENTVGEGGNIEKD--PVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWISQEPESAWPSAPANLRRNPCSSLEMPQQQSGENGSPAPQQLRRPVNTDRMDSDHCEPMEHYDHGSGHVDRPMPLFGVGGPGQSGVEEDPGVLPAMSGAARAVAARECKRLLDRGRVWFVQEKLGLTCELVHFVEREVTPENALLLAF 1760 P G+V+ +R+ KK A Q + TG W+ CR V K R+C+Q R +A++C H D R+PCP+D H++ + L+ H+KIC T+ + ++ Q ++SK INSG P +G +DV D A + + I +AV+ A ++ DLI R+ A+ EHVG +S L PP+ + L + ++ RH++QQ+S++GHM +RG+V P Y+EMGAGRG LG A+ +P S+I +++ + RN DK L RA++DIRDL+ LP QG++ VV VAKHLCGV TDLALRA LTL P +++ G GG+ D + S A S +A+ G G VAIATCCHH + DYVG+ F GF+ RDF A+ R+ W + P R P SS Q + SD G+G G V D A R R+ K L+D GR ++ E LG+ ELV+F +R +PEN LLLA+ Sbjct: 26 PAEGNVKPLRISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPR-KRDAQYCGLHQ--QEVFDAESRIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQP--EHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRAKGNPPFRAKVDIRDLDAGKLP---LPQGKR--VVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAG-----VAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATTF-------GPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASD---------------------SGIGCEGGGAVRTD---------AERREIGRKSKALIDWGRKEYL-EGLGMEAELVYFCDRAFSPENCLLLAW 571
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: A0A8K1FML3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FML3_PYTOL) HSP 1 Score: 221 bits (562), Expect = 1.820e-61 Identity = 159/455 (34.95%), Postives = 229/455 (50.33%), Query Frame = 3 Query: 45 DSGSVEERERGLSRKRRQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMPASSF----------ADGNRRVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSGRPSSGK-----------DCDSDVTWDHAGEEAVGEPGNAIGNAAVFDEAFVLDLITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKL-DGVST-------RARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAMLTLPPGNIDPIVENTVGEGGNIEKDPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWIS 1322 +S + EER +KR+QEK A+K+G W+RC FR+ K RFC +R++ A FC H+PA + A+ RVPCP+D +H V + LE H+K+CNKTR ++ + PY+S++INSG + + D +H G A E + I A D A DL+ RV++A+ VG + E L AL T G RH+ QQAS++GHM + L+ +++ ++E+GAGRG L A+A FP S +I+R+ R KAD + D +S RA+IDIR LN+AG+ L P+V ++KHLCGVATDL+LRA + NTV P S P AG G+A+A CCHHAC W DY EF L GF+A++F ++ +++W + Sbjct: 10 ESSATEER-----KKRKQEKL----AAMKSGEWDRCMFRIVRKNRFCNMERIN-GALFCGNHLPADAQVSSKSSQQFKAELRSRVPCPIDGSHTVYQYDLEKHLKVCNKTRDAEAAKALPYYSENINSGTHAVTTREELKAAEVSIEASDDTEKEHDGPTAQQEQ-SLIDKLAALDFA---DLVKRVNSAYDTCVGSIPTEKLRHSCCDALLTEKTAAGASRAALRHIEQQASIIGHMERAKLLD--SKAAFLELGAGRGMLSLALAQTFPDSLYVLIDRAGSRGKADHFIRDNMSDTSAHKVMRAKIDIRHLNLAGMKELV-----DMPIVGMSKHLCGVATDLSLRA------------IANTVPV-------PESHP----------------------AGVISPAFKGIAVALCCHHACQWEDYSNPEFFLAQGFSAQEFPLLKGMTSWAT 402
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: W4H4G0_9STRA (tRNA:m(4)X modification enzyme TRM13 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4G0_9STRA) HSP 1 Score: 218 bits (554), Expect = 3.140e-60 Identity = 171/585 (29.23%), Postives = 256/585 (43.76%), Query Frame = 3 Query: 93 RQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMPASSFADGNR----------RVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSGR--------PSSGKDCDSDVTWDHAGEEAVGEPGNAIGNAAVFDEAFVLDL---ITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADK--KLDGVSTRARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAML-TLPPGNIDPIVENTVGEGGNIEKDPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWISQEPESAWPSAPANLRRNPCSSLEMPQQQSGENGSPAPQQLRRPVNTDRMDSDHCEPMEHYDHGSGHVDRPMPLFGVGGPGQSGVEEDPGVLPAMSG---AARAVAARECKRLLDRGRVWFVQEKLGLTCELVHFVEREVTPENALLLAFRA 1766 R ++KR + A+K G W +C F++ K RFC RV E + +C H+ + RVPC LDP H V L+ H+ ICNK ++++ + P+++ +INSG PS+ D+ T +H+G + + A++F LD ++ AA +HV + + LD L + G RH+ QQAS++GHM + L+ + +YVE+GAGR L A+ +P S +I+R+ R KAD+ LD TRA+IDIR LN+A + + +P+V ++KHLCGVATDL+LRA+ TLP G D E G + V G+AIA CCHHACSW DYV F +++GF A +FK M +S W + C G+ D G + + G A R R+CKRLLD GRV +++E+ G+ +LVH+ +++ + EN LLLA+R+ Sbjct: 20 RLKRKREKAKAMKDGEWTQCMFKLERKNRFCNVARV-EGSLYCGNHVVDDEGVVSQKTKKYKQELCKRVPCTLDPTHTVYLFDLKKHLVICNKLKEAEVMRSLPFYTANINSGTHAATGTSDPSTTVQDDTSATEEHSGPSSDKQ-------ASLFQTLVGLDFNAFAAKIDAAFDKHVPVIPTQTLDHAACNTLLQQKQAAGANHSILRHIQQQASILGHMESKRLLR--SDCVYVELGAGRAMLSLALTQMYPSSPFVLIDRAGSRGKADQYIALDNKCTRAKIDIRHLNLAKMDQVA-----HQPLVCLSKHLCGVATDLSLRALANTLPAGPSDDATEAPTGHPQKMSSHLV----------------------------------GLAIALCCHHACSWEDYVNPAFFVDMGFTAAEFKLMVPLSGWAT-----------------------------------------------------C----------------------------GMTMDGGAVETVLGFNRADRTRMGRQCKRLLDMGRVHYLRER-GVQAQLVHYCDQDESLENCLLLAWRS 473
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: A0A024UQA3_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQA3_9STRA) HSP 1 Score: 215 bits (548), Expect = 2.290e-59 Identity = 168/581 (28.92%), Postives = 260/581 (44.75%), Query Frame = 3 Query: 93 RQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMPASSFADGNR----------RVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSGRPSSGKD-----CDSDVTWDHAGEEAVGEPGNAIGNAAVFDEAFVLD---LITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKL--DGVSTRARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAML-TLPPGNIDPIVENTVGEGGNIEKDPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWISQEPESAWPSAPANLRRNPCSSLEMPQQQSGENGSPAPQQLRRPVNTDRMDSDHCEPMEHYDHGSGHVDRPMPLFGVGGPGQSGVEEDPGVLPAMSG---AARAVAARECKRLLDRGRVWFVQEKLGLTCELVHFVEREVTPENALLLAFR 1763 R ++KR + A+K G W +C F++ K R C RV E + +C H+ + RVPC LDP+H V L+ H+ ICNK ++++ + P++S++INSG ++G D D + D A + P +A A++F +D L ++ +A+ +V + + LD AL + G RH+ QQAS++GHM + L+ P +Y E+GAGR L A+ +P S +I+R+ R KAD+ + + TRA+IDIR LN+A + + +P+V ++KHLCGVATDL+LRA+ TLPP G G++ P++ S G+AIA CCHHAC W DYV ++ L++GF +FK M +S W + C G+ D G + ++ G A R R+CKRLLD GRV +++E+ G+ ELVH+ E++ + EN LLLA++ Sbjct: 21 RLKRKREKSKAMKDGEWTQCMFKLKRKNRLCNVARV-EGSLYCGNHIVDEEGVTSQKTKKHKQELCKRVPCTLDPSHTVYLFDLKKHLVICNKLKEAEAMRSLPFYSENINSGTHAAGSDHVAPPVDEALHVDDANVDEHSCPSSA-KQASLFQTLAAMDFNSLAAKIKSAYDANVPSIPTQKLDHAACTALLKEKQAAGANHSVLRHIQQQASILGHMEAKHLLRPS--HVYCELGAGRAMLSLALTQIYPSSPFVLIDRAGSRGKADQHIATENKCTRAKIDIRHLNLAKMEQVAN-----QPLVCLSKHLCGVATDLSLRALANTLPPSE---------GSAGSVPP-PIT-----------------------------SHFVGLAIALCCHHACRWEDYVHPQYFLDMGFTVAEFKLMVSLSGWAT-----------------------------------------------------C----------------------------GMSTDGGAVESVLGLNRADRTQLGRQCKRLLDMGRVHYLRER-GVRAELVHYCEQDESLENCLLLAWQ 471
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: A0A5D6XLD7_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLD7_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.170e-58 Identity = 156/450 (34.67%), Postives = 229/450 (50.89%), Query Frame = 3 Query: 93 RQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMP-----ASSFA-----DGNRRVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSG---------RPSSGKDCDSDVTWDHAGEEAVGEPGNAIGNA----AVFDEAFVLD---------LITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKLDGVST-------RARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAML-TLPPGNIDPIVENTVGEGGNIEKDPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWIS 1322 ++++K+ + A+++G WERC FR+ K+RFC R++ A FC H+P AS+ A D +RVPCP+D H V L+ HV +CNK + + + PY+ ++INSG P + D+ G + EP A A + DE +LD L RV AA+ VG++ +E L +AL D G RH+ QQAS++GHM + L+ S++VE+GAGRG L A+A +F S +++R+ R KAD+ ++G RA+IDIR LN+AG+ + RPVV ++KHLCGVATDL+LRA+ TLP G PG A+ + + + VSA A + R G+A+A CCHH C+W DYV EF GF AR+F + +S+W + Sbjct: 24 KRQRKKLKHAAMQSGDWERCMFRLVRKDRFCNMARIN-GALFCGNHLPPDADVASNKAGRYKTDRRQRVPCPVDKRHTVYVYDLDKHVLVCNKVKDAAAMTLLPYYVENINSGAHCVRKAGSEPPAAPIADATPEAPPIGADGGEEPKEAAAAAHAGLSANDEQGLLDKLLAVDFPDLSRRVHAAYERCVGEIPLEKLTHACCEALFAEKKDAGAAKNVLRHIEQQASILGHMARVNLLD--ASSVFVELGAGRGMLSLALAQSFRDSVFVLVDRAHTRGKADRFIEGPDEAPSRKVLRAKIDIRHLNLAGMQEVV-----DRPVVCMSKHLCGVATDLSLRAVTQTLPRG-----------------------PG------AESAASSAQPAVSALAVSPLFR--GLAVALCCHHVCAWEDYVNPEFFEAHGFLAREFPLLTGMSSWAT 434
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: A0A485KSY0_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSY0_9STRA) HSP 1 Score: 212 bits (539), Expect = 4.380e-58 Identity = 171/585 (29.23%), Postives = 251/585 (42.91%), Query Frame = 3 Query: 93 RQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMPASSF----------ADGNRRVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSGRPSSGKDCDSDVTWDH-------AGEEAVGEPGNAIGNAAVFDEAFVLD---LITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKL--DGVSTRARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAML-TLPPGNIDPIVENTVGEGGNIEKDPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWISQEPESAWPSAPANLRRNPCSSLEMPQQQSGENGSPAPQQLRRPVNTDRMDSDHCEPMEHYDHGSGHVDRPMPLFGVGGPGQSGVEEDPGVLPAMSGAARAVAARECKRLLDRGRVWFVQEKLGLTCELVHFVEREVTPENALLLAFRA*ETA 1778 R ++KR + A+K G W C F++ K R+C RV E +++C H+ A+ +RVPC LDP+H V L+ H++ICNK ++++ + PY+S +INSG + + ++ + A +F +D L +++AA HV + + L L G RH+ QQAS++GHM + L+ P +YVE+GAGR L A+ +P S +I+R+ R KAD+ + + TRA+IDIR LN+ G+ + Q+PVV ++KHLCGVATDL+LRA+ TLPP D + + VG +AIA CCHHAC W DYV Q F LE+GF DF M +S W + C G+G G + VE + S AAR R+CKRL+D GRV +++ LGL ELVH+ ++ + EN LLLA+R + A Sbjct: 25 RNKRKREKAKAMKDGEWTHCMFKLERKNRYCNVARV-EGSKYCGNHIVDEEGVVSQKTKKYKAEMRKRVPCTLDPSHTVYLFDLKKHLEICNKLKEAEAMRSLPYYSLNINSGTHTGASTXXXXXXXXXXXXXXXXSTDDQEHSAPSLEKQANLFQTLAKMDFNALAKKIAAAFDAHVSAIPTQTLQHRACDILLEQKQASGAAHSVLRHIQQQASILGHMDAKHLLHPD--HVYVELGAGRAMLSLALTQIYPASPYVLIDRAGSRGKADQYIATENTCTRAKIDIRHLNLGGMDQVV-----QKPVVCLSKHLCGVATDLSLRALANTLPPVAADTMSPHLVG---------------------------------------------LAIALCCHHACCWDDYVNQAFFLEMGFTRADFALMVPLSGWAT-----------------------------------------------------C--------------------GMGTEGDA-VE----TVLGWSRAARTALGRQCKRLMDMGRVLYLRH-LGLHAELVHYCDQAESLENCLLLAWRQDDAA 477
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: A0A225W5E4_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5E4_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.100e-57 Identity = 152/452 (33.63%), Postives = 221/452 (48.89%), Query Frame = 3 Query: 54 SVEERERGLSRKRRQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVSENAEFCVTHMPASSFADGN----------RRVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSGRPSSGKDCDSDVT------WDHAGEEAVGEPGNAIGNAAVFDEAFVLDLITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKLDG------------VSTRARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAML-TLPPGNIDPIVENTVGEGGNIEKDPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWIS 1322 S E+ R + RKRR K+A+ A G W+RC F+V K R+C RVS + FC H+P S + RRVPCP+D +H V E L HV +CN+ + + +++ PY+S +INSG S K S +H+ A + G I D A DL R+ A+ VG+L++E L L G RH+ QQAS++GHM K L+ + + +VE+GAGRG L A+A +P S +I+R+ R KAD+ + G + RA+IDIR LN AG+ + +PVV ++KHLCGVATDL+LRA+ TLP NI+ + +++ ++ S S+ G +AIA CCHH C+W DYV F L GF A +F + +++W + Sbjct: 6 SAEQLSRDVQRKRR---KQAKAEAKDGGEWDRCMFKVVRKNRYCNISRVSGSL-FCGNHLPDSDASKSKKSQKFKAATRRRVPCPVDSSHTVYEYDLAKHVLVCNRVKDADTMKKLPYYSHNINSGTHCSDKTESSSTEEXXXXXXEHSAPSAQEQQG-IIDKLQAIDFA---DLRKRIDTAYAACVGELTLEKLHHKCCDQLFEEKKKAGASKSVLRHIEQQASIIGHMEKATLL-EDSNAAFVELGAGRGMLSLALAQMYPDSLYVLIDRAHTRGKADRFIGGDGKDDEAAKENSTTLRAKIDIRHLNFAGMQEILN-----KPVVCMSKHLCGVATDLSLRAIAQTLPEPNINVV-------------------------------QSIDTSTSVSSSFQG-----LAIALCCHHVCAWEDYVNPAFFLAQGFTAEEFVLLTSMTSWTT 407
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Match: A0A067CWT3_SAPPC (tRNA:m(4)X modification enzyme TRM13 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CWT3_SAPPC) HSP 1 Score: 209 bits (531), Expect = 6.140e-57 Identity = 141/427 (33.02%), Postives = 211/427 (49.41%), Query Frame = 3 Query: 93 RQEKKRAQQLALKTGLWERCRFRVPGKERFCAQQRVS---------ENAEFCVTHMPASSFADGNRRVPCPLDPNHNVAERLLESHVKICNKTRQSKELEQQPYFSKDINSGRPSSGKDCDSDVTWDHAG---EEAVGEPGNAIGNAAVFDEAFVLD---LITRVSAAHREHVGDLSMEVLDPPQVQALHRTVTDGGVGFRKGRHVLQQASLVGHMLKRGLVGPGTRSLYVEMGAGRGALGQAIATAFPGSEITMIERSSIRNKADKKL--DGVSTRARIDIRDLNMAGLPSLTTGQGEQRPVVAVAKHLCGVATDLALRAMLTLPPGNIDPIVENTVGEGGNIEKDPVSKPGRSARSAADLKSETVRSTVSASAGTYGSRAGGVAIATCCHHACSWRDYVGQEFLLELGFNARDFKAMQRISAWIS 1322 R ++KR + A G W +C F++ K R+C RV+ E E V++ A+ +RVPC LDP+H V L+ H+ +CNK ++++ ++ PYFS++INSG ++ ++DV+ D EE E +A A++F +D +V AA+ + VG + E L L G RH+ QQAS++GHM ++ L+ Y+E+GAGR L A+ +P S +I+R+ R KAD+ + + TRA+IDIR LN+AG+ T + P+V ++KHLCGVATDL+LRA+ T P P+ N + G+AIA CCHHACSW DYV +L ELGF+A DFK + +S W + Sbjct: 30 RSKRKRDKFKAAADGEWTQCMFKLERKARYCNVARVAGSLYCGNHIERDEGVVSNKSKKFKAEMRQRVPCTLDPSHTVYLYDLKKHLVVCNKLKEAEAMQALPYFSRNINSGSHAAAPQDNTDVSVDEPDNETEENSHEAPSAARQASIFQILAKMDYTAFAAKVEAAYAKAVGSIPTETLKHDACTKLLVEKEATGASHGALRHIQQQASIIGHMERKSLLHKSFT--YMELGAGRAMLSLALTQLYPASPFILIDRAGTRGKADQYIATESTCTRAKIDIRHLNLAGMKEAT-----ETPLVCLSKHLCGVATDLSLRALATTLP----PVQANAMSP----------------------------------------HLHGLAIALCCHHACSWDDYVNPTYLEELGFSAADFKVLVSLSGWAT 405 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1053.348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1053.348.1 >prot_H-paniculata_contig1053.348.1 ID=prot_H-paniculata_contig1053.348.1|Name=mRNA_H-paniculata_contig1053.348.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=579bp MSTPDSGSVEERERGLSRKRRQEKKRAQQLALKTGLWERCRFRVPGKERFback to top mRNA from alignment at H-paniculata_contig1053:18916..29185- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1053.348.1 ID=mRNA_H-paniculata_contig1053.348.1|Name=mRNA_H-paniculata_contig1053.348.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10270bp|location=Sequence derived from alignment at H-paniculata_contig1053:18916..29185- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1053:18916..29185- >mRNA_H-paniculata_contig1053.348.1 ID=mRNA_H-paniculata_contig1053.348.1|Name=mRNA_H-paniculata_contig1053.348.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3474bp|location=Sequence derived from alignment at H-paniculata_contig1053:18916..29185- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |