prot_H-paniculata_contig1599.3472.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1599.3472.1
Unique Nameprot_H-paniculata_contig1599.3472.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
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BLAST of mRNA_H-paniculata_contig1599.3472.1 vs. uniprot
Match: A0A6H5JLT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT0_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.450e-9
Identity = 39/86 (45.35%), Postives = 50/86 (58.14%), Query Frame = 0 
Query:   74 KRGRDSEVET------DALMNNQGI------EPLMTVAEAFSDELQTLRANEHFKGSARDVEVMASMMRCLARGMDDTERLLLLEN 147
            KR R  EVE       DA    +G       E L  +AEAF+D+L  LR +EHF GSA D+  MA MMRC+A G+D  E+ +LL+N
Sbjct:   87 KRQRHDEVEKPAEDAGDASGGEEGHATTQEDECLGLMAEAFADDLDLLRKDEHFGGSANDIAAMADMMRCIAGGLDSIEQRMLLDN 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1599.3472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JLT0_9PHAE1.450e-945.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1599contigH-paniculata_contig1599:1078..5961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1599.3472.1mRNA_H-paniculata_contig1599.3472.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1599 926..6207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1599.3472.1 ID=prot_H-paniculata_contig1599.3472.1|Name=mRNA_H-paniculata_contig1599.3472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MEQKQQQQNIKAGLDACWQQYCALRQGVLEAANATGYPISKISQLDMKLE
QSLLTPDRVSANHGNAPPRLTGGKRGRDSEVETDALMNNQGIEPLMTVAE
AFSDELQTLRANEHFKGSARDVEVMASMMRCLARGMDDTERLLLLENLRT
ANNGPWKGSDTRNTPTVVPPGP*
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