prot_H-paniculata_contig15989.3471.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15989.3471.1
Unique Nameprot_H-paniculata_contig15989.3471.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 66.2 bits (160), Expect = 5.090e-11
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            ++ + DNG W  +  P +  AVG K +YK K++ DGK+E+YK RLVA+G  QIEG  Y E +SP
Sbjct:  180 LKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSP 243          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 64.3 bits (155), Expect = 2.360e-10
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            ++ + DNG W  +  P +  AVG K +YK K++ DGK+E+YK RLVA+G  QIEG  Y + +SP
Sbjct:    5 LKALEDNGTWSIVQLPSNCHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSP 68          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: UPI001CB79F24 (hypothetical protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79F24)

HSP 1 Score: 62.4 bits (150), Expect = 3.750e-10
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            M+ +  N  W  +  PKD+ A+G K ++K K   +GK+ KYK RLVA+G  QIEGV Y E +SP
Sbjct:  101 MKSLDQNHTWNLVKLPKDRKAIGCKWVFKRKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSP 164          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: UPI000B5D1DA9 (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI000B5D1DA9)

HSP 1 Score: 60.5 bits (145), Expect = 3.950e-10
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    7 NGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            NG W     PK+K A+G+K +YK K   +GK+++YK RLVA+G  QIEG+ + +++SP
Sbjct:   11 NGTWILTDLPKEKKAIGSKWVYKVKTKPNGKVDRYKARLVAKGYNQIEGLDFKDQFSP 68          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: A0A1U8HL54_CAPAN (uncharacterized protein LOC107879464 n=2 Tax=Capsicum annuum TaxID=4072 RepID=A0A1U8HL54_CAPAN)

HSP 1 Score: 62.8 bits (151), Expect = 8.470e-10
Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    1 MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            M+ + DN  W  I+ P  K+ +G K +YK K   +GK+E+YK RLVA+G  Q EG+ YT+ +SP
Sbjct:  549 MKALEDNQTWSLISLPPGKVFIGCKWVYKVKFQSNGKVERYKARLVAKGYNQQEGLDYTDTFSP 612          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: UPI00090552C3 (uncharacterized protein LOC109208296 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI00090552C3)

HSP 1 Score: 59.7 bits (143), Expect = 1.010e-9
Identity = 27/64 (42.19%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    1 MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            ++ + DN  WE +  P  K  +G+K +YK K + +GK+E++K RLVA+G  Q EG+ Y E +SP
Sbjct:   24 VKALEDNRTWEVVPIPVGKFIIGSKWVYKIKYNSNGKVERFKARLVAKGYNQQEGLDYHETFSP 87          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: A0A5N6PQI0_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PQI0_9ASTR)

HSP 1 Score: 62.0 bits (149), Expect = 1.610e-9
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    1 MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            M  +  N  WE    P+ K AVG K  +K KV  DG++ +YK RLVA+G  QIEG+ YTE ++P
Sbjct:  622 MAALKKNNTWELTNLPEGKNAVGVKWTFKTKVGPDGRITRYKARLVAKGYSQIEGIDYTETFAP 685          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: A0A151TAZ4_CAJCA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TAZ4_CAJCA)

HSP 1 Score: 61.2 bits (147), Expect = 1.650e-9
Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    1 MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            ++ + DN  W   A P D  A+G K +YK K   DG++E+YK RLV  G  Q+EG+ YTE ++P
Sbjct:   36 IQALEDNQTWTICALPADNKALGCKWVYKIKYHSDGRIERYKARLVILGNHQVEGIDYTETFAP 99          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: A0A6I9TKF2_SESIN (uncharacterized protein LOC105164425 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TKF2_SESIN)

HSP 1 Score: 61.6 bits (148), Expect = 2.180e-9
Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            ++ +  N  W     P  K A+G+K ++K K+  DG +E+YK RLVA+G  QIEGV YTE +SP
Sbjct:  634 IKALESNQTWTLTPLPPGKRAIGSKWVFKVKLRADGSIERYKARLVAKGFNQIEGVDYTESFSP 697          
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Match: A0A6V7PQ94_ANACO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PQ94_ANACO)

HSP 1 Score: 59.7 bits (143), Expect = 3.070e-9
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    7 NGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGVWQIEGVHYTEKYSP 64
            N  WE +  PK+K A+G K +Y+ K   DGK++KYK RLVA+G  Q  G+ + E +SP
Sbjct:  121 NQTWELVDMPKEKEAIGVKWVYRVKYDADGKVKKYKARLVAKGYAQKSGIDFLETFSP 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15989.3471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC5.090e-1148.44Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
UPI00084940232.360e-1046.88uncharacterized mitochondrial protein AtMg00810 n=... [more]
UPI001CB79F243.750e-1046.88hypothetical protein n=1 Tax=Blastococcus sp. CPCC... [more]
UPI000B5D1DA93.950e-1046.55uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A1U8HL54_CAPAN8.470e-1045.31uncharacterized protein LOC107879464 n=2 Tax=Capsi... [more]
UPI00090552C31.010e-942.19uncharacterized protein LOC109208296 n=1 Tax=Nicot... [more]
A0A5N6PQI0_9ASTR1.610e-946.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151TAZ4_CAJCA1.650e-943.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6I9TKF2_SESIN2.180e-945.31uncharacterized protein LOC105164425 n=1 Tax=Sesam... [more]
A0A6V7PQ94_ANACO3.070e-946.55Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 10..64
e-value: 3.5E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15989contigH-paniculata_contig15989:676..891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15989.3471.1mRNA_H-paniculata_contig15989.3471.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15989 676..894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15989.3471.1 ID=prot_H-paniculata_contig15989.3471.1|Name=mRNA_H-paniculata_contig15989.3471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
MRGMVDNGLWEQIARPKDKLAVGTKMLYKFKVSKDGKMEKYKCRLVAQGV
WQIEGVHYTEKYSPTPGSHSC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2