mRNA_H-paniculata_contig1053.346.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: F4PU28_CAVFA (Ankyrin repeat-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PU28_CAVFA) HSP 1 Score: 65.9 bits (159), Expect = 2.730e-8 Identity = 61/198 (30.81%), Postives = 82/198 (41.41%), Query Frame = 1 Query: 268 RFSDESTALHLAVLGGYGNIVKLLLDKGASILNNSEGCTAFRCAVRSGHQEILCIFLVHCSEKHGMKGKGPRRDLGDYLVERDFFGGTMLHDAILIGCC-----ATVRLLLHGTSKEDTNECVERSPSHNVGTARVGSSVVIIPNLPVHDAALLLTDNAGRRPLHLAVARGYIDIVVAILTYKASIVDLEDDTGMTAL 846 R D TA+H A GGY +I+ LLLD GA I + EGCTA LC + + M KGPRR + RD G T LH A+ V +L+ G S D + +++P H + I+ + TD G LH AVA + V L K V+ D+TG T + Sbjct: 325 RDHDRQTAMHKAA-GGYPDILSLLLDSGAHIKRDMEGCTALH----------LCCYYGNIQCVSTMMSKGPRRVKAE---ARDKKGRTALHYALESSSSDDITSQIVAILIEGGSLLDPKDREKKTPLHYSAILGKFKCLAILLEKGANPDC---TDIYGAMTLHYAVAHQMGNKAVKQLVAKGCKVNTPDNTGQTPI 505
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: A0A3S2NY45_CHISP (Uncharacterized protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A3S2NY45_CHISP) HSP 1 Score: 64.7 bits (156), Expect = 3.480e-8 Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = 1 Query: 169 NADGETALHVAARAGNFEAVVILLAQKCP----CNVQRFSDESTALHLAVLGGYGNIVKLLLDKGASI-LNNSEGCTAFRCAVRSGHQEILCIFLVHCSEKHGMKGKGPRRDLGDYLVERDFFGGTMLHDAILIGCCATVRLLLH 588 +ADG+T LH+AA G+ + V IL+ CP N+Q T LHLAV+GGY +VK+L+ GAS+ + + G T A + E L L E+ P R L L ++DF G T +H A G T++ L++ Sbjct: 101 DADGDTQLHIAAVHGSEKFVGILI-HLCPDKSLLNLQN-DYRHTPLHLAVMGGYAVVVKMLVIAGASLDVRDVCGRTPLHIAAETRDVECLKAMLAPIEEQ-------PHRKLASVLNQKDFNGQTCVHVAANAGHLKTLQTLVY 236
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: UPI000C77AE95 (transient receptor potential cation channel subfamily A member 1 homolog isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C77AE95) HSP 1 Score: 63.9 bits (154), Expect = 1.280e-7 Identity = 75/273 (27.47%), Postives = 126/273 (46.15%), Query Frame = 1 Query: 61 NSVLHLSAATGCAGVLVALLCYARALNKDAGLVSACNADGETALHVAARAGNFEAVVILLAQKCPCNVQRFSD--ESTALHLAVLGGYGNIVKLLLDKGASI-LNNSEGCTAFRCAVRSGHQEILCIFLVHCSEKHGMKGKGPRRDLGDYLVERDFFGGTMLHDAILIGCCATVRLLLHGTSKEDTNECVERSPSHNVGTARVGSSVVIIPNLPVHDAALLLTDNAGRRPLHLAVARGYIDIVVAILT-YKASIVDLEDDTGMTALEIAIEEE 867 N+ LHLSA G +L LL ++ LN + A N + TALH A + G + V +LL +V F D E T L LAV G +IVKLLLD GAS+ + N G + R GH +I+ + ++ ++ K + G+ + D T +++ V+ ++ ++D + RSP + A + ++ L A + L D+ + PL +A+ G+ +I +L Y + + + D+ G + AI+ E Sbjct: 240 NTCLHLSAVHGHDHILKFLLDNSK-LN-----LKAFNREQMTALHFACK-GETQCVKVLLDHPSATDVINFGDKAERTPLFLAVASGKLDIVKLLLDHGASLAITNKFGESPLHFCARYGHADIMKLLTAELAKDSNLQYKDLQS--GNLTDQVDGKKKTKKKWELVLRQSTVVKKIIKIIDEQDK---MLRSPFY---LASKHNHKNVVDVLKQSGANISLADHHNKTPLMIALLSGHQEISSMLLKLYSVNELKIIDNDGRNIMHYAIQAE 497
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: UPI0010396F67 (NF-kappa-B inhibitor cactus n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI0010396F67) HSP 1 Score: 62.8 bits (151), Expect = 1.530e-7 Identity = 57/200 (28.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 175 DGETALHVAARAGNFEAVVILLAQKCP----CNVQRFSDESTALHLAVLGGYGNIVKLLLDKGASI-LNNSEGCTAFRCAVRSGHQEILCIFLVHCSEKHGMKGKGPRRDLGDYLVERDFFGGTMLHDAILIGCCATVRLLLHGTSKEDTNECVERSPSHNVGTARVGSSVVIIPNLPVHDAALLLT--DNAGRRPLHLA 753 DG+T LH+AA G + + IL+ + CP ++Q TALHLAV+GG+ + ++L+ G+S+ + + G T A + + + L L E+ P R LG L ++D+ G T +H A G T++ L+H ++ + E + + ++ R V + L A ++ DN GR P LA Sbjct: 100 DGDTQLHIAAVHGCEKTIGILI-KLCPEKALLDIQN-DYRHTALHLAVMGGFSVVTRMLVLAGSSLAVRDICGRTPVHIAAETSNVDCLKALLAPIIEQ-------PHRKLGPILNQKDYNGQTCVHAAAAAGHVKTLQTLVHYGAEINAREGLAGWTALHIAARR--GDVRLSQYLLEQCAGVVKNPRDNGGRTPRRLA 288
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: A0A8B8Q000_9MYRT (protein ACCELERATED CELL DEATH 6-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8Q000_9MYRT) HSP 1 Score: 63.2 bits (152), Expect = 1.900e-7 Identity = 85/296 (28.72%), Postives = 127/296 (42.91%), Query Frame = 1 Query: 61 NSVLHLSAATGCAGVLVALLCYARALNKDAGLVSACNADGETALHVAARAGNFEAVVILLAQKCPCNVQRFSD-ESTALHLAVLGGYGNIVKLLLDKGASIL--NNSEGCTAFRCAVR--------------SGHQEILCIFLVHCSEKHG---------MKGKGPRRDLGDYLVERDFFGGTMLHDAILIGCCATVRLLLHGTSKEDTNECVERSPSHNVGTARVGSSVVIIPNL---PVHDAALLLTDNAGRRPLHLAVARGYIDIVVAILTYKA--SIVDLEDDTGMTALEIA 855 NS+LH +A +L ALL + +D L + N G+TALH+AARAG A +LL+ C V +D +TALH AV + +LLL +G++++ N EG AV GH EIL + S HG +K R++L D RD GGT LH A + V L++ + E +V ++ +++ L P D L L D G+ LH+A G ++ IL +++ +D G T L +A Sbjct: 85 NSLLHAAAGIEEGDILQALL----EVIRDKSLTAKVNCRGDTALHIAARAGRIRAAELLLS--CRGIVDTANDIGNTALHEAVKNSNRELTRLLLSQGSNLVYKENKEGKCPLYLAVEMEDSTNLKLLMEAVDGH-EILPSQIEGMSPVHGAVLYKRIEMLKEMSKRKELFDL---RDDKGGTPLHLAAYLNYIDGVEFLVNNFASSAFEGDKEGYLPIHVA-CKMDRRIIVKKLLHLWPNPDELLNLKD--GQNILHVAAKCGSTSVIRFILDNPKLERLINAKDKEGNTPLHVA 367
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: UPI002017B022 (protein ACCELERATED CELL DEATH 6-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=UPI002017B022) HSP 1 Score: 63.2 bits (152), Expect = 1.950e-7 Identity = 85/296 (28.72%), Postives = 127/296 (42.91%), Query Frame = 1 Query: 61 NSVLHLSAATGCAGVLVALLCYARALNKDAGLVSACNADGETALHVAARAGNFEAVVILLAQKCPCNVQRFSD-ESTALHLAVLGGYGNIVKLLLDKGASIL--NNSEGCTAFRCAVR--------------SGHQEILCIFLVHCSEKHG---------MKGKGPRRDLGDYLVERDFFGGTMLHDAILIGCCATVRLLLHGTSKEDTNECVERSPSHNVGTARVGSSVVIIPNL---PVHDAALLLTDNAGRRPLHLAVARGYIDIVVAILTYKA--SIVDLEDDTGMTALEIA 855 NS+LH +A +L ALL + +D L + N G+TALH+AARAG A +LL+ C V +D +TALH AV + +LLL +G++++ N EG AV GH EIL + S HG +K R++L D RD GGT LH A + V L++ + E +V ++ +++ L P D L L D G+ LH+A G ++ IL +++ +D G T L +A Sbjct: 85 NSLLHAAAGIEEGDILQALL----EVIRDKSLTAKVNCRGDTALHIAARAGRIRAAELLLS--CRGIVDTANDIGNTALHEAVKNSNRELTRLLLSQGSNLVYKENKEGKCPLYLAVEMEDSTNLKLLMEAVDGH-EILPSQIEGMSPVHGAVLYKRIEMLKEMSKRKELFDL---RDDKGGTPLHLAAYLNYIDGVEFLVNNFASSAFEGDKEGYLPIHVA-CKMDRRIIVKKLLHLWPNPDELLNLKD--GQNILHVAAKCGSTSVIRFILDNPKLERLINAKDKEGNTPLHVA 367
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: A0A834YQK3_9MAGN (PGG domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YQK3_9MAGN) HSP 1 Score: 62.0 bits (149), Expect = 4.390e-7 Identity = 82/303 (27.06%), Postives = 130/303 (42.90%), Query Frame = 1 Query: 70 LHLSAATGCAGVLVALLCYARALNKDAG-LVSACNADGETALHVAARAGNFEAVVILL-AQKCPCNVQRFSDESTALHLAVLGGYGNIVKLL-----LDKGAS----ILNNSEGCTAFRCAVRSGHQEILCIFL------VHCSEKHGMKGKGPRRDLGDYL--------------VERDFFGGTMLHDAILIG----------CCATVRLLLHGTSKEDTNECVERSPSHNVGTARVGSSVVIIPNLPVHDAALLLTDNAGRRPLHLAVARGYIDIVVAILTYKASIVDLEDDTGMTALEIA 855 LH++A G V+ L+ +AR D L+ CN G ALH A R+ N + V +L+ A ++ + ES A G + I+K+L L++ +S I G T AV GH+++L + L + ++ G LG+YL + D G +H A + G C +R +L+G ED N + S G +V S++ +P L + + T N G PLHLA + IV ++ K ++L +D G+TAL+IA Sbjct: 74 LHIAARAGYPTVVQFLIDWARDEIHDPNVLLRECNKYGNIALHEAVRSRNPKVVELLMYADPQSMSILNNNGESPFYLAADRGLFHTILKMLFLILPLEQDSSHTPSIYGGPNGQTPMHAAVARGHKDMLQVLLYEKKELIRVADYDGRTPLHYAASLGNYLNGVIRILITDAFCAYQEDKDGLLPIHLAAIKGHNDIVECMLKVCPDLREVLNG---EDQNVLHVAAKS---GKQKVVKSILKMPELSM---LINETYNKGNTPLHLATIHWHPKIVTTLVHDKRVDMNLINDEGLTALDIA 367
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: UPI000B4EF7BB (B-cell lymphoma 3 protein n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4EF7BB) HSP 1 Score: 61.2 bits (147), Expect = 6.700e-7 Identity = 68/221 (30.77%), Postives = 99/221 (44.80%), Query Frame = 1 Query: 136 LNKDAGLVSACNADGETALHVAARAGNFEAVVILLAQ-KCPCNVQRFSDE--STALHLAVLGGYGNIVKLLLDKGASILN-NSEGCTAFRCAVRSGHQEILCIFLVHCSEKHGMKGKGPRRDLGDYLVE-RDFFGGTMLHDAILIGCCATVRLLLHGTSKEDTNECVE-RSPSHNVGTARVGSSVVIIPNLPVHDAALLLTDNAGRRPLHLAVARGYIDIV 780 L+ D L + + DG+T LH+A N + LLA K C + T LHLAV+ G ++V+LL+ GAS + + G TA A GH E L L + G +E R++ G T LH A+ GC V+LLL + D + RSP + A +S+ ++ L VH A + +G LH A RG + +V Sbjct: 115 LSADIALATRADEDGDTPLHIAVVQRNMDIFYRLLALFKIGCRGVDVHNNLRQTPLHLAVITGLPDMVRLLVIAGASPMALDRHGQTAAHLASEHGHPEHLQALLDSAAP-------------GSVDLEARNYEGLTALHVAVNAGCQDAVQLLLERGADIDAVDIKSGRSPLIH---AVENNSLSMVQLLLVHGANVNAQMYSGSSALHSASGRGLLPLV 319
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: A0A5J5ACW9_9ASTE (PGG domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5ACW9_9ASTE) HSP 1 Score: 60.5 bits (145), Expect = 1.380e-6 Identity = 72/298 (24.16%), Postives = 128/298 (42.95%), Query Frame = 1 Query: 61 NSVLHLSAATGCAGVLVALLCYARALNKDAGLVSACNADGETALHVAARAGNFEAVVILLA----QKCPCNVQRF--------SDESTALHLAVLGGYG-NIVKLLLDK--GASILNNSEGCTAFRCAVRSGHQEILCIFLVHCSEK-HGMKGKGPRRDLGDYLVERDFFGGTMLHDAILIGCCATVRLLLHGTSKEDTNECVERS---PSHNVGTARVGSSVVIIPNLPVHDAALLLTDNAGRRPLHLAVARGYIDIVVAILTYKASIVDLEDDTGMTALEIAIEEESEAMCRVLIE 897 N+VLH++A G L C L + + N+ GET +++AAR G ++ V +L+ Q+ NV +D+ TALH A+ + +V+LL + S + N+ T A G+ + + L C+E +G GP G T LH A++ + LL+ K+D + + + P H S V ++ N A L ++ LH+A ARG++DI+ +++ ++ + G L IA++ + E + ++E Sbjct: 51 NTVLHIAAQFGN------LECVKYILRMNPMIFDRLNSKGETPIYIAAREGEYDIVKVLIEHAKEQEQHGNVGAAKKMQMLTNNDKETALHEAMRNSFAYKLVELLTQEVPELSCVANNADETPLYLAAEGGNYLFVSLILEKCTEPAYG----GP-------------LGRTALHAAVVHDSEECTKRLLNW--KQDLLKKADENGWRPLHYAARYGTVSMVRLLLNEDKSVAYLTANEDGRTTALHIATARGHVDIMEVLISRCPGCWEVNNSRGQNILHIAVQSKKEKAIKFILE 323
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Match: UPI000644E29A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E29A) HSP 1 Score: 60.5 bits (145), Expect = 1.570e-6 Identity = 55/203 (27.09%), Postives = 86/203 (42.36%), Query Frame = 1 Query: 268 RFSDESTALHLAVLGGYGNIVKLLLDKGASILNNSEGCTAFRCAVRSGHQEILCIFLVHCSEKHGMKGKGPRRDLGDYLVERDFFGGTMLH----------DAILIGCCATVRLLLHGTSKEDTNECVERSPSHNVGTARVGSSVVIIPNLPVHDAALLLTDNAGRRPLHLAVARGYIDIVVAILTYKASIVDLEDDTGMTAL 846 R + T++H A + G +++ ++LD GA I +S GCT SG V C+ M +GPRR + RD G T LH A+LI +R L++G S D+ + +++P H A + + I L A D G LH AV V ++ + + V+ D+TG T + Sbjct: 182 RDQERQTSMHRAAMSGLHDVLSVMLDSGAHIKRDSNGCTPLHLCATSGS--------VRCAT--AMMERGPRRVKAE---ARDKKGKTALHYAAESPSPDDTALLI-----IRALVNGGSILDSKDREKKTPLH---LASIMGKIKCITFLLEKGANADAADYFGALALHYAVTNQNCHKAVKLMVARGAKVNTADNTGQTPI 363 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1053.346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1053.346.1 >prot_H-paniculata_contig1053.346.1 ID=prot_H-paniculata_contig1053.346.1|Name=mRNA_H-paniculata_contig1053.346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=302bp ILSSNSAGASIMTRATERGYNSVLHLSAATGCAGVLVALLCYARALNKDAback to top mRNA from alignment at H-paniculata_contig1053:8586..9491+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1053.346.1 ID=mRNA_H-paniculata_contig1053.346.1|Name=mRNA_H-paniculata_contig1053.346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=906bp|location=Sequence derived from alignment at H-paniculata_contig1053:8586..9491+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1053:8586..9491+ >mRNA_H-paniculata_contig1053.346.1 ID=mRNA_H-paniculata_contig1053.346.1|Name=mRNA_H-paniculata_contig1053.346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1812bp|location=Sequence derived from alignment at H-paniculata_contig1053:8586..9491+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |