prot_H-paniculata_contig15958.3454.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15958.3454.1
Unique Nameprot_H-paniculata_contig15958.3454.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length280
Homology
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 3.830e-51
Identity = 103/276 (37.32%), Postives = 166/276 (60.14%), Query Frame = 0
Query:    1 MLTIYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTPGIGKELTTN-PAGSVY-EQGTRDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYL-DAPNLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCDNKGTLLLAGQGNYGSRSKHLAIR 273
            +L IYVDD+LI G N   +++ +  LM  F  T  G+  +++GI + ++ +H T++  Q  Y   +L+ +     N V TPG G EL+T  P   +   +  + +QAI G+L++L Q TR D+++A+ Q  R  ANP  VHM + K +LRYL   P+L I Y +   F L+ F D+S+G  +P+  RST+G ++FL GG+I + +  Q + AQ++ EAEL  +S  A++ +Y+S  + E+G+K  R V I  D+ G L +A    + SR+KH+A+R
Sbjct:  412 ILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GKFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALR 685          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 3.000e-50
Identity = 103/276 (37.32%), Postives = 165/276 (59.78%), Query Frame = 0
Query:    1 MLTIYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTPGIGKELTTN-PAGSVY-EQGTRDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYL-DAPNLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCDNKGTLLLAGQGNYGSRSKHLAIR 273
            +L IYVDD+LI G N   ++  +  LM  F  T  G+  +++GI + ++ +H T++  Q  Y   +L+ +     N V TPG G EL+T  P   +   +  + +QAI G+L++L Q TR D+++A+ Q  R  ANP  VHM + K +LRYL   P+L I Y +   F L+ F D+S+G  +P+  RST+G ++FL GG+I + +  Q + AQ++ EAEL  +S  A++ +Y+S  + E+G+K  R V I  D+ G L +A    + SR+KH+A+R
Sbjct: 1191 ILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALR 1464          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 2.880e-46
Identity = 91/250 (36.40%), Postives = 148/250 (59.20%), Query Frame = 0
Query:   27 MAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTPGIGKELTTN-PAGSVY-EQGTRDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYL-DAPNLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCDNKGTLLLAGQGNYGSRSKHLAIR 273
            M  F  T  G+  +++GI + ++ +H T++  Q  Y   +L+ +     N V TPG G EL+T  P   +   +  + +Q I G+L++L Q TR D+++A+ Q  R  ANP  VHM + K +LRYL   P+L I Y +   F L+ F D+S+G  +P+  RST+G ++FL GG+I + +  Q + AQ++ EAEL  +S  A++ +Y+S  + E+G+K  R V I  D+ G L +A    + SR+KH+A+R
Sbjct:    1 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALR 248          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.010e-41
Identity = 97/265 (36.60%), Postives = 153/265 (57.74%), Query Frame = 0
Query:   13 GPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTPGIGKELTTNPAGSVY--EQGTRDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYL-DAPNLTITYSRDSNFELTGFCDASY-GTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCDNKGTLLLAGQGNYGSRSKHLAIR 273
            G   + +  ++  L  KF  T  G A  +LG+ I+Q      +S  QH YV+++L  +    C    TPG G E+   P  ++Y  E+  + YQ I+G+L+FLT +TR +I +A+    R M  PT  HM   KR+LRYL   P++ + + R   ++L  +CDAS+ G+S+  + RS++G ++ L GGV+  +S+ QK+TAQSS  AE+I M+T A++ IYL G+L ELG+     + I  D+ G +  AG   +  RSK ++ R
Sbjct:  395 GKTPSVVQDLKKQLSDKFKMTDGGPAELLLGMEISQSDGEIIVS--QHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRR-GQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGN-IPIHSDSTGAMSTAGNSMFRGRSKFISTR 655          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A4Q3EC79_9SPHI (Transposon Pol polyprotein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3EC79_9SPHI)

HSP 1 Score: 158 bits (399), Expect = 1.200e-41
Identity = 95/278 (34.17%), Postives = 154/278 (55.40%), Query Frame = 0
Query:    4 IYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTP-GIGKELTTNPAGSVYEQGTRDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYLDAP-NLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCDNKGTLLLAGQGNYGSRSKHLAIRSAGLHD 279
            ++VDD+LI         K+R+ L ++F     GDA  ILGI IT++R   T+S  Q  Y+ ++L+ F    CN  +TP  +  + +   +G+  +     Y+  IG+L+F  Q TR DI F++   +R+   P + H  + KRI+RYL    +  +TY   S  ++ G+ DA YG  D +  +STSG ++   G  + + S  QK+ AQS+TEAE I++S   K+ I+L  +  E+  K +   +I CDNKG + LA   N+  ++KH+ I+   +HD
Sbjct:  138 VWVDDVLIACNQKCEEEKLRAALESRFKMKYLGDAKVILGIQITRDRMKKTVSIDQRRYIETVLERFGMEDCNPANTPMDVNTKYSRKMSGNDEKNEIFPYREAIGSLLFAAQVTRPDIIFSVILLSRYCEEPKWAHWIATKRIMRYLKGTIDHKLTYG-PSRTDIIGYSDADYG-GDIDDRKSTSGYVFVKNGTALCWQSKKQKVVAQSTTEAEFISLSFATKEAIWLHALCNEITGKPNLPYQIYCDNKGAIDLARNNNHSEQTKHVDIKFKLVHD 413          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A6H5JW03_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW03_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.660e-41
Identity = 90/250 (36.00%), Postives = 146/250 (58.40%), Query Frame = 0
Query:    1 MLTIYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTPGIGKELTTN-PAGSVY-EQGTRDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYL-DAPNLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRI 247
            +L IYVDD+LI G N   ++  +  LM  F  T  G+  +++GI++ ++ +  T++  Q  Y   + + +     N V TPG G EL+T  P   +   +  + +QAI G+L++L Q TR D ++A+ Q  R  ANP  VHM + K +LRYL   P+L I Y +   F L+ F D+S+G  +P+  RS +G ++FL GG+I + +  Q + AQ++ EAEL  +S  A++ +Y+S  + E+G+K  R V I
Sbjct:  101 ILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIAVQRDYELGTLAISQGPYARDIQQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDPSYAVHQLKRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSITGYLFFLGGGLISYGAKAQTLAAQNTLEAELQALSFSAREAVYISNFMTEIGFKTFRSVSI 348          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A6D2IS22_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IS22_9BRAS)

HSP 1 Score: 156 bits (394), Expect = 1.620e-39
Identity = 91/279 (32.62%), Postives = 157/279 (56.27%), Query Frame = 0
Query:    2 LTIYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTPGIGKEL---TTNPAGSVYEQGTRD---YQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYLD-APNLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCDNKGTLLLAGQGNYGSRSKHLAIR 273
            L +YVDD+LI   + + +  +++ L A+F     G A +ILG+ I ++ K   +   Q  Y+  LLK F+   C  V TP +G  +      P   V +    D   Y +++G+L++    +R D+A+A+   +R+M  P   H  +V+ ILRYL  A +  +T+++DS  ++TG+CD+ Y T DP+K RS +G ++ + G  + + S  QK  A S+TEAE + +S  +++ ++L GI  ELG+K    V I CD++  + LA    +  R+KH+ ++
Sbjct:  441 LLLYVDDMLIASKSKSDIKVLKAMLSAEFEMKDLGPARRILGMDIIRDNKRGVLVLSQEAYLQKLLKTFSMWDCREVQTP-LGSHIKLQALTPQQEVEQAREMDKIPYASVVGSLMYAMVGSRPDLAYAVGMVSRYMGKPGREHWSAVQWILRYLKGAASKCLTFTKDSELKVTGYCDSDYAT-DPDKRRSITGYVFTVGGNTVSWRSCLQKFVALSTTEAEYVALSEASREAVWLKGICEELGFKQGV-VNIHCDSQSAIYLAKNHMFHERTKHIQVK 716          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A1B8A6V2_FUSPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fusarium poae TaxID=36050 RepID=A0A1B8A6V2_FUSPO)

HSP 1 Score: 149 bits (377), Expect = 2.590e-38
Identity = 94/280 (33.57%), Postives = 145/280 (51.79%), Query Frame = 0
Query:    2 LTIYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTPGIGKELTTNPAGSVYEQGTRD---YQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYLDAPNLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRR-----VRILCDNKGTLLLAGQGNYGSRSKHLAIR 273
            + +YVDDLLI+GP+ + +  ++  L  +F  T  G     LGI+I ++R    +   Q  Y+  +L       C+ V TP +  +     AG  Y     D   Y   IG+L++    TR DIA+A+S  +R++ NPT  H+  VKR+LRYL      +        +L+G+CDA +G SDP+  RST G ++ L  GVI + S  Q   A S+ EAEL+  +  AK+ ++L  +L +L  K   +       I  DN+G + L     +  R+KH+AIR
Sbjct:  165 IAVYVDDLLIVGPDMSEIETVKKQLSERFQMTDLGSCHHYLGITIKRDRARRRLYLSQKTYIKKILHDLGMEDCHPVKTP-VSPDTKFKEAGQDYMASDEDKTWYARAIGSLMYAMLGTRPDIAYAVSLLSRYLKNPTEEHISGVKRVLRYLKGTEDYVLMFEGQLKDLSGYCDADWG-SDPDTRRSTMGYVFQLGSGVISWCSKRQTTVALSTCEAELMAQTHAAKEAMWLRKLLQDLIVKTEEQSDLTTTVIFGDNQGAIALTKNPQHHGRTKHIAIR 442          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A2N9HLU0_FAGSY (Uncharacterized protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HLU0_FAGSY)

HSP 1 Score: 153 bits (386), Expect = 3.140e-38
Identity = 91/279 (32.62%), Postives = 154/279 (55.20%), Query Frame = 0
Query:    1 MLTIYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTP-----GIGKELTTNPAGSVYEQGTRDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYLDAP-NLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCDNKGTLLLAGQGNYGSRSKHLAIR 273
            +L +YVDD+L+ GPN   +  +++ L  +F     G A +ILG+ I ++R +  I   Q +Y+  +L+ F    C  + TP      +   ++ +      E     Y + +G+L+F    TR DIA A+   +R+MANP   H  +VKRILRY+    N+ + Y   S+F + G+ D+ Y   D +K++STSG ++ L GG + + S  Q I A S+TEAE +  +  +K+ I+L  +L ELG K  + + + CD++  L LA    + S++KH+ ++
Sbjct:  989 ILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGVVSRYMANPGKEHWNAVKRILRYVKGTSNVALCYG-GSDFTVRGYVDSDY-AGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHKQEK-IALFCDSQSALHLAKNPAFHSKTKHIRVQ 1264          
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Match: A0A2N9GY85_FAGSY (Glutaredoxin-dependent peroxiredoxin n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GY85_FAGSY)

HSP 1 Score: 153 bits (386), Expect = 3.200e-38
Identity = 91/279 (32.62%), Postives = 154/279 (55.20%), Query Frame = 0
Query:    1 MLTIYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQERKHDTISEIQHHYVVSLLKIFARNVCNTVHTP-----GIGKELTTNPAGSVYEQGTRDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYLDAP-NLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHFSSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCDNKGTLLLAGQGNYGSRSKHLAIR 273
            +L +YVDD+L+ GPN   +  +++ L  +F     G A +ILG+ I ++R +  I   Q +Y+  +L+ F    C  + TP      +   ++ +      E     Y + +G+L+F    TR DIA A+   +R+MANP   H  +VKRILRY+    N+ + Y   S+F + G+ D+ Y   D +K++STSG ++ L GG + + S  Q I A S+TEAE +  +  +K+ I+L  +L ELG K  + + + CD++  L LA    + S++KH+ ++
Sbjct: 1423 ILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGVVSRYMANPGKEHWNAVKRILRYVKGTSNVALCYG-GSDFTVRGYVDSDY-AGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHKQEK-IALFCDSQSALHLAKNPAFHSKTKHIRVQ 1698          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15958.3454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF46_9PHAE3.830e-5137.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE3.000e-5037.32Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5KC04_9PHAE2.880e-4636.40Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J897_9PHAE1.010e-4136.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4Q3EC79_9SPHI1.200e-4134.17Transposon Pol polyprotein (Fragment) n=1 Tax=Sphi... [more]
A0A6H5JW03_9PHAE1.660e-4136.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2IS22_9BRAS1.620e-3932.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1B8A6V2_FUSPO2.590e-3833.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9HLU0_FAGSY3.140e-3832.62Uncharacterized protein n=3 Tax=Fagus sylvatica Ta... [more]
A0A2N9GY85_FAGSY3.200e-3832.62Glutaredoxin-dependent peroxiredoxin n=1 Tax=Fagus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..81
e-value: 1.2E-10
score: 41.5
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 101..273
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 101..273
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 3..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15958contigH-paniculata_contig15958:2555..4077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15958.3454.1mRNA_H-paniculata_contig15958.3454.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15958 2465..4095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15958.3454.1 ID=prot_H-paniculata_contig15958.3454.1|Name=mRNA_H-paniculata_contig15958.3454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp
MLTIYVDDLLIIGPNNTALAKIRSTLMAKFTKTGFGDATQILGISITQER
KHDTISEIQHHYVVSLLKIFARNVCNTVHTPGIGKELTTNPAGSVYEQGT
RDYQAIIGNLIFLTQSTRMDIAFAISQAARFMANPTFVHMRSVKRILRYL
DAPNLTITYSRDSNFELTGFCDASYGTSDPEKARSTSGSMYFLFGGVIHF
SSSPQKITAQSSTEAELITMSTCAKQGIYLSGILGELGWKNSRRVRILCD
NKGTLLLAGQGNYGSRSKHLAIRSAGLHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like