prot_H-paniculata_contig15942.3446.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15942.3446.1
Unique Nameprot_H-paniculata_contig15942.3446.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length154
Homology
BLAST of mRNA_H-paniculata_contig15942.3446.1 vs. uniprot
Match: D8LC29_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC29_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 2.490e-62
Identity = 96/147 (65.31%), Postives = 121/147 (82.31%), Query Frame = 0
Query:    1 RWENTKVVLNHPNLRGLQHVRIRDPPARSRFWRWHISGDGHICTAEATYFMLKEFEAVSGVSTEGGRLEDMMFLFALVHSRIKEAYANEPAKAGQLEPSSEAAKRRRRARSIKLDKLVKAKYKGLEEVRAREGDEVAVEEFCRRRRG 147
            RW NT  V+ HP L+GL+HVRIR+PPA S+FWRWH  G+GHICTAEATY +LK+FE  +G+ T GGRLED++FLFAL+ SRIK AY ++P+K G+  PSSE AK+RRR R ++LD+LVKAKYKGL+ +R R+GDE A+EEF RRRRG
Sbjct:  147 RWVNTGAVVGHPKLKGLRHVRIREPPAVSQFWRWHTEGEGHICTAEATYLVLKDFEEATGLVTRGGRLEDILFLFALMGSRIKAAYESDPSKLGKSCPSSEEAKQRRRVRLVQLDRLVKAKYKGLDALRERDGDEAAIEEFFRRRRG 293          
BLAST of mRNA_H-paniculata_contig15942.3446.1 vs. uniprot
Match: A0A484EFL7_BRELC (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFL7_BRELC)

HSP 1 Score: 83.2 bits (204), Expect = 5.160e-16
Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 0
Query:    2 WENTKVVLNHPNLRGLQHVRIRDPPARSRFWRWHISGDGHICTAEATYFMLKEFEAVS-------GVSTEGGRLEDMMFLFALVHSRIKEAYANEPAKAGQLEPSSEAAKRRRR 108
            W+   V++NHP+L  L+HVR+  PP  S FWR+H +G G + T EA   ML+E+ AV+        V +E  +L D++F F L   RI + + N  A   +  P   A K RRR
Sbjct:  129 WQKAPVIMNHPSLANLRHVRLSQPPKESNFWRYHKAGAGCVSTIEAIKLMLEEYTAVAKTANIETAVGSENTQLSDLLFFFKLQFLRIVDHF-NHEADPDRKPPMDAAEKERRR 241          
BLAST of mRNA_H-paniculata_contig15942.3446.1 vs. uniprot
Match: R7QI40_CHOCR (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI40_CHOCR)

HSP 1 Score: 53.9 bits (128), Expect = 1.490e-5
Identity = 30/104 (28.85%), Postives = 49/104 (47.12%), Query Frame = 0
Query:    2 WENTKVVLNHPNLRGLQHVRIRDPPAR-SRFWRWHISGDGH------------ICTAEATYFMLKEFEAVSGVSTEGGRLEDMMFLFALVHSRIKEAYANEPAK 92
            W  + +++  P LRGL HV +  P  R +RFWR+      H            + T E+ +     +    G+    G  +D+++LFA +H R++E Y N P K
Sbjct:  160 WTKSVLLMRDPCLRGLPHVSL--PAGRGTRFWRYAPKRSEHSEYFNPDKVGSLLSTVESVHRFCDSYNQAKGIGP--GACDDLLWLFAFLHGRVREVYENAPGK 259          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15942.3446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC29_ECTSI2.490e-6265.31tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A484EFL7_BRELC5.160e-1638.60tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
R7QI40_CHOCR1.490e-528.85tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15627NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1coord: 2..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15942contigH-paniculata_contig15942:14..3279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15942.3446.1mRNA_H-paniculata_contig15942.3446.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15942 14..3279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15942.3446.1 ID=prot_H-paniculata_contig15942.3446.1|Name=mRNA_H-paniculata_contig15942.3446.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
RWENTKVVLNHPNLRGLQHVRIRDPPARSRFWRWHISGDGHICTAEATYF
MLKEFEAVSGVSTEGGRLEDMMFLFALVHSRIKEAYANEPAKAGQLEPSS
EAAKRRRRARSIKLDKLVKAKYKGLEEVRAREGDEVAVEEFCRRRRGSRW
GSW*
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