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Homology
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A6H5LRB6_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LRB6_9PHAE) HSP 1 Score: 330 bits (846), Expect = 5.550e-100 Identity = 177/260 (68.08%), Postives = 202/260 (77.69%), Query Frame = 1
Query: 157 MAKVIRKDLEAKLQALNGEEWDSMSEDDMSDDDIVTEIIGSTTKEDLTPLPLHIQQKKA--KGKXXXXXXXXXXXSVVPVGPHGEPSGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNREVAEGPFQ-PKPQSGNKTDA 927
MAKVIR+DLE KL AL G EWDSMSE D+S + ++ ++L P PL KKA KGK SVVPVGP GEPSGV+YIGHIPHGFYEEAMNGFF QFGDV+RVR+SRSKKSGRCKGYAYVEFASPEVA IVA TMNGY+L++KQLVCRVLKFEEIHP LFDG+G KFRKVNWHGLY++K NADRT +D++HT +LL +D K++KLA GIDYDFPGFVATLK+R VA+GPFQ PK NK A
Sbjct: 1 MAKVIRRDLEQKLAALEGAEWDSMSESDLSGGE-------ASDGDELKPPPLPRHAKKAGRKGKGGG--------SVVPVGPAGEPSGVVYIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFASPEVAQIVAETMNGYYLFDKQLVCRVLKFEEIHPNLFDGAGVKFRKVNWHGLYREKYNADRTQVKDEKHTAKLLKKDKAKKDKLAKLGIDYDFPGFVATLKDRNVAKGPFQKPKGAKQNKESA 245
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: B3S8Q0_TRIAD (RRM domain-containing protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3S8Q0_TRIAD) HSP 1 Score: 170 bits (431), Expect = 1.730e-45 Identity = 76/146 (52.05%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 415 VIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFV 852
VIY+GHIPHGFYEE M GFF QFGD+ ++RLSRSK+SGR +GYA++EF++ +VA IVA TMN Y + + L C+++K E +HP F G+ KFRK+NW L K++ NA +T +E+ + +L+ + ++R KL GIDY FPG+V
Sbjct: 1 VIYVGHIPHGFYEEEMKGFFSQFGDINKIRLSRSKRSGRSRGYAFIEFSNQDVATIVAETMNNYMMCGRLLKCQLMKSESVHPETFKGANRKFRKINWRELAKKQANAPKTDQENTKVVNKLIKAENVRRKKLQKLGIDYQFPGYV 146
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A369RRV5_9METZ (MKI67 FHA domain-interacting nucleolar phosphoprotein-like n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369RRV5_9METZ) HSP 1 Score: 172 bits (436), Expect = 2.650e-45 Identity = 77/148 (52.03%), Postives = 108/148 (72.97%), Query Frame = 1
Query: 412 GVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVA 855
GVIY+GHIPHGFYEE M GFF QFGD+ ++RLSRSK+SGR +GYA++EF++ +VA IVA TMN Y + + L C+++K E +HP F G+ KFRK+NW L K++ NA +T +E+ + +L+ + ++R KL GIDY FPG+ A
Sbjct: 48 GVIYVGHIPHGFYEEEMKGFFSQFGDINKIRLSRSKRSGRSRGYAFIEFSNQDVATIVAETMNNYMMCGRLLKCQLMKSESVHPETFKGANRKFRKINWRELAKKQANAPKTDQENTKVVNKLIKAENVRRKKLQKLGIDYQFPGYAA 195
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A4P9YU86_9FUNG (RRM domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YU86_9FUNG) HSP 1 Score: 168 bits (425), Expect = 1.440e-44 Identity = 79/148 (53.38%), Postives = 108/148 (72.97%), Query Frame = 1
Query: 412 GVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVA 855
GV+Y+G IPHGFYE+ M G+FGQFG V R+RLSR+KK+GR K YA+VEFA +VA +VA TMN Y L+ L C+V+ ++H RLFDG+ KF+ + H + +++ N RTP+E ++HTKRLL ++ KR +L GIDY FPGFV+
Sbjct: 1 GVVYVGRIPHGFYEDEMRGYFGQFGTVSRLRLSRNKKTGRSKHYAFVEFADADVADVVADTMNNYLLFGHLLKCQVVPAHKVHARLFDGANRKFKPLPLHKMAREEHNRTRTPEEVERHTKRLLRKEQQKRKRLQDAGIDYAFPGFVS 148
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A197JPK7_9FUNG (FHA domaininteracting nucleolar phospho protein putat n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JPK7_9FUNG) HSP 1 Score: 165 bits (417), Expect = 1.640e-42 Identity = 77/154 (50.00%), Postives = 111/154 (72.08%), Query Frame = 1
Query: 409 SGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNR 870
+GV+Y+G IPHGFYE+ MN +F QFG V+R+RLSR+KK+G+ K YA++EFAS EVA IVA TM+ Y L+ QL C+ L+ +IHP +F G+ KF+ + W + K+K NA+++ + KQ K+LL + KR KLA GIDY+FPG+ A ++ +
Sbjct: 68 TGVVYLGRIPHGFYEDQMNAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPTQIHPAMFLGANKKFKAIPWQKISKEKHNAEKSAAQMKQVAKKLLKNESAKRAKLAELGIDYEFPGYKANIQEK 221
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A7S3XMA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMA8_HETAK) HSP 1 Score: 164 bits (416), Expect = 2.920e-42 Identity = 103/233 (44.21%), Postives = 141/233 (60.52%), Query Frame = 1
Query: 157 MAKVIRKDLEAKLQALNGEEWDSMSEDDMSDDDIVTEIIGSTTKEDLTPLPLHIQQKKAKGKXXXXXXXXXXXSVVPVGPHGEPSGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVA 855
M+KV+RK+LEAKL +L EW S SE++ + GST ++ P +K XXXXXXX + S V+Y+GHIPHGFYE+ M FF QFGDV +RLSRS++ GR +GYA++EF S EVA IVA TM+GYFL +KQL C ++ E++H R+F S K + +W ++ N +T K+ RLL ++ KR +LAA GI+YDFPG+ A
Sbjct: 9 MSKVLRKELEAKLASLEDPEWASESENEGDE--------GSTEASKVSNPP---PAEKXXXXXXXXXXX-------------KESAVVYLGHIPHGFYEKEMGSFFDQFGDVKHLRLSRSRRGGRSRGYAFIEFYSAEVAQIVAETMHGYFLEDKQLQCHIVPKEKVHERMFQASCRKLKVEDWQKFAREDHNKPKTQKQMDASVSRLLQKEGKKRRRLAALGIEYDFPGYAA 217
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A1Y2H203_9FUNG (RRM domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H203_9FUNG) HSP 1 Score: 167 bits (422), Expect = 9.150e-42 Identity = 79/154 (51.30%), Postives = 109/154 (70.78%), Query Frame = 1
Query: 409 SGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNR 870
+GV+Y+G IPHGFYEE M +F QFG V+R+RLSR+KK+G+ K YA++EFAS EVA IVA TMN Y L+ QL C+ L+ +IHP +F G+ KF+ + W + K+K NA++T + Q K+LL + KR KLA GIDYDFPG+ A++ +
Sbjct: 187 TGVVYLGRIPHGFYEEQMKAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVAEIVADTMNNYLLFGHQLKCKALQPSQIHPAMFSGANKKFKAIPWLKIAKEKHNAEKTTVQSNQIKKKLLKNEAAKRAKLAELGIDYDFPGYKASVPEK 340
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: R1DE27_EMIHU (RRM domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DE27_EMIHU) HSP 1 Score: 161 bits (408), Expect = 9.860e-42 Identity = 88/163 (53.99%), Postives = 110/163 (67.48%), Query Frame = 1
Query: 400 GEPSG---VIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKV--NADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNRE 873
G PSG V+Y+GHIPHGFYEE M GFF QFGDV R+RL+R+KK+G K YA+VEFA EVA IVA MNGY ++ K LVC+V+ E++HP +F GSG F VN L +++V N RT E K+LLA + KR KL A GIDY+F G+ A + RE
Sbjct: 25 GGPSGSGTVLYLGHIPHGFYEEQMRGFFSQFGDVTRLRLARNKKTGASKHYAFVEFAHAEVASIVAQAMNGYLMFTKILVCQVVPDEQLHPNMFKGSGKPFTPVN--RLKRERVAHNKKRTADEATALEKKLLAGERKKRRKLEAAGIDYEFGGYEAAVAQRE 185
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A2V0P5R3_9CHLO (RRM domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5R3_9CHLO) HSP 1 Score: 160 bits (404), Expect = 4.340e-41 Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 1
Query: 409 SGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATL 861
S V+YIGH+PHGFYE + GFF QFG + RVR+SRSKK+GR K YA++EFA PEVA I A M G+F++ ++L R LK E+HP LF G+ KF++V W + ++ N DRTP+E +LL RD +R ++ A GIDY++ G A L
Sbjct: 41 SNVVYIGHLPHGFYERELLGFFSQFGRLTRVRVSRSKKTGRAKHYAFLEFAVPEVARIAAEAMEGHFMFAQRLSVRCLKRREVHPELFKGANRKFKQVPWRKIEAERHNRDRTPQEHAARVAKLLRRDRKRRERIRAAGIDYEYDGLEAAL 191
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A9TBA7_PHYPA (Predicted protein (Fragment) n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9TBA7_PHYPA) HSP 1 Score: 156 bits (394), Expect = 1.870e-40 Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 1
Query: 409 SGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFV 852
S VIY+G IPHGFYEE M GFFGQFGD+ R+RLSR+KK+G+ K YA++EF S EVA IVA M+ Y L+ L +V+ E++ P ++ G+ F+K+ W L +++ N RTPKE +H L+ +D +R KL A GIDYD+P V
Sbjct: 1 SAVIYVGRIPHGFYEEQMRGFFGQFGDIKRLRLSRNKKTGKSKHYAFIEFESAEVAPIVAEAMHNYLLFESMLQVKVVPVEKLKPSMWVGANKTFKKIEWQRLERERHNRMRTPKEQSRHLALLVKKDQARRKKLQAAGIDYDYPELV 148
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 334.3 |
| Seed ortholog evalue | 9.4e-89 |
| Seed eggNOG ortholog | 2880.D7G018 |
| Preferred name | NOP15 |
| KEGG ko | ko:K14838 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000910,GO:0000912,GO:0000915,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019843,GO:0022402,GO:0022607,GO:0022613,GO:0030029,GO:0030036,GO:0030684,GO:0030687,GO:0030865,GO:0030866,GO:0031032,GO:0031974,GO:0031981,GO:0032506,GO:0032991,GO:0042254,GO:0042273,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044837,GO:0051301,GO:0061640,GO:0070013,GO:0071840,GO:0097159,GO:1901363,GO:1990904 |
| EggNOG free text desc. | RNA binding |
| EggNOG OGs | KOG4208@1,KOG4208@2759 |
| Ec32 ortholog description | RNA recognition motif domain |
| Ec32 ortholog | Ec-22_003260.1 |
| COG Functional cat. | B |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03009 |
| Exons | 5 |
| Model size | 3049 |
| Cds size | 1476 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1589.3411.1 >prot_H-paniculata_contig1589.3411.1 ID=prot_H-paniculata_contig1589.3411.1|Name=mRNA_H-paniculata_contig1589.3411.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=492bp
MAKVIRKDLEAKLQALNGEEWDSMSEDDMSDDDIVTEIIGSTTKEDLTPL
PLHIQQKKAKGKKGGGGVAAGGGSVVPVGPHGEPSGVIYIGHIPHGFYEE
AMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGY
FLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKE
DKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNREVAEGPFQPKPQ
SGNKTDATELKIRKTSDATADNATTVNMDEVVPDAATAQSEVVVGDGQKA
KTPSKKKKINAETSEEKGKKENVENSGETKRSEENSGETKGNGEKSKLKM
GNAKKTKGKKGNAENSEKGNAKNSEKKGNAKNSEKKGNAKNSEKEGNAKN
SEKKGNAKNSEKEGSAKNSDKKGNAKNSEKEGSREKFRKEGKCEKFREGE
KREKFRKKGKREKFRAGGKCEKFCAGGKREKFQKKGKCDKF* back to topmRNA from alignment at H-paniculata_contig1589:15909..25339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1589.3411.1 ID=mRNA_H-paniculata_contig1589.3411.1|Name=mRNA_H-paniculata_contig1589.3411.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9431bp|location=Sequence derived from alignment at H-paniculata_contig1589:15909..25339+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCAGCATTCTTCAAGAGTACGACAGACAGCCAACAAAGTTGAGTACATT
GCTTGATTGTAACGTCCTGGGCTGCATTATCCACCTTGTCTCTGTCTATC
CCAAAGGCTGATACACTAGACAAGAGAACTACTCGACTACCACAACACCA
GTAAAAATGGCGAAGGTCATTCGCAAGGATCTGGAGGCCAAGTTACAGGC
ACTGAATGGCGAGGAATGGGACAGCATGTCAGAGGACGATATGTCCGACG
ACGATATCGTCACAGAGATAATAGGCAGCACCACCAAGGAAGACCTTACG
CCATTGCCTCTCCATATCCAGCAGAAGAAAGCCAAAGGAAAAAAAGGGGG
GGGAGGTGTAGCTGCTGGTGGTGGGTCTGTGGTGCCTGTAGGCCCTCATG
GGGAGCCCTCTGGGGTAATCTACATAGGCCACATCCCACACGGCTTTTAT
GAGGAAGCGATGAATGGATTCTTCGGGCAGTTTGGGGATGTAGTGCGGGT
GCGGCTGTCCCGGAGCAAGAAGAGTGGGCGTTGCAAGGTATGCTACATAT
GTTAGGTGCGAGGGTAGTTTCACTCATGGTCGTTCGAAAGCACACGACCG
TTTTACACATGATCTGATCGAGGTACACAGACATGTCTACAGTCGTATGA
TACAATAGACACGATCTGCACAGTCGGTGTGTGTAAACCAGCGATTACTA
CTTGTATATAGTATCACTGGCTATTAGTAGAGCTACGGGTACACCCAGAC
AGTTCATGTTTGTCTTCGACCCATGGACTTCCTGCGCTCGCAGTGGCTCG
CTACGCTCGCACGAAGATTCATTCGCCTGTAGGGAGTTGTAACTCGAGTA
CAGACTTGAAACACTGATCGGAAACGACGAGCGCTACCATCCGTAACCTT
TACAGACCACCAGTCTGCGTTTCGACATACTTGACGTGGGGTTTATGACA
GTCCTGCGTCAAGAGAAGAGGGGGGATGGTTTCTGGTAGGACACTGCTAC
CGAGTTTCGACGTACAAAGTTGCTTCGACCGGGTTGAGATGAGACGCTCA
TGTCGACAAACATATCGCGAATAGTACAACGGGATATCTAAATGTTTTGG
TTAACAAAATTATTTTAGAGTATCGGATGCCGACGCTAGGTATTAAAAAG
CATCGAATATATTGACAATATTTGTCTACATCAAGGGCTAATAGCACAGC
TGATATAATGCAGTACACATATTGGGTCCCTCGAGCGGTGGCAGTGAGCT
GCACAGCGCAAACAGCATGATGCCGCACACTTGCCCCCGGCGACAAAGGA
TACAGACAGTAATGCTGCATGCAGCACCACATCTGCGGTACGCAAGAGCT
GGCAGGCATCAGCATATTATCCCGAGATTTCCGTAGCGAAGGATAGCCAC
TTCGTCTGTGGTGTCCTGTTATGAATGGGTACCCACAGGCACAACAGCGG
GCGCTCTGCCACAGTCAGCCGTGGCAATCGAGACATGACAATACGACTGA
TATTATCCTAGTTGTTAATTAGACGTTGGGCTTCCTGAAACAAACTTGTT
CCTTCCTGTCAGATCCCTTCTTTTCTTTTTTTTCTTTTTTTTCAAGGTGT
ACGGGGGTTGATGTATGTATTAAATAATTAGAATTCAGTGTACCCCCCCC
CCACTCTTTTCTGTTGTTGAAAACTTGAAGTTTATTACATTTTTGTTACA
TTCTGGCGGATGACGTCGATACGAACAAAATAATAGAAGAAGAAATCAAG
CGTGGCACCACAACCATCACCTGTTTTTCTTGAAGATTTTTGGTATATCG
TGGTCGACACACACATAAATATTCTGAACATTTCTAGACACTATGACTGC
TCTGTTCCTCATATTTCCAGCGACGTCCCTGACCGGGTGTGGGCTCATCT
GATGACACCTAGAGTGTCCGTGGTGTCTTCAGAATTTCGTGATTGGTTCC
ATGATGTTGAAATTAGGGCGTTGTAGGATCGTGTTGGGTAGATCTTTGGA
TGCTGCGAATCTATTGATTGAGAAACGGCAAATGCTATTACAAGTGCAAA
TGCATCGTTGACCGTAAAAACTCTTGCCCATAGACACTAGAGAGCACAAA
ACCACCTCGCCAGAGCACTGTGGGGCATGAGTGAAGCCCCCATGCCTGCG
GTAAACGTCTGGCACAGCTTTCGAACCTCACGCAGCATTGTGCGAACAGA
GCGCATGTCTGATGCCCATAAAACTTTCAGTTTTATGCCAAAAAAGTGAC
AGTGGATTCTACTCAAAACCTACGTGAACTTAACTCGCCAGGTCGTTGCC
AGTATTGTATGGTCGACCCAACGAACATAACATGCTGACCGTTCAGTGTC
TATACTGATCGACTGATCGGTGACTGCCGGCTGCCAGCAATTTGTTCACA
AGCTCATAACTTGAAAGACGCTGCCCCACATCCCTTTTATGTGTCCTAAG
TATGTCATGTGCTAAGGCTCGCCTGGAATGATTGCCCTCTCCGCCTGCGC
GGTGTGTTGGTAGATGGACAAATTCTATACAAAAACCGCATGTCCGGGTC
TCCGCCAGTCAGACTCGCCCCTTTTTTTTTGGACTATTATCTTTTTGTTA
TATATGGGTTGCAGTATAGGTGTTACATCTCCCCTCTGTAAACACTACGG
TGCCTGTAATGGAGGGTTGGTATCTGTTGCAATCCACAGTGGGCAATTCT
GTTTATGACGCCATGTAGGCTACAATGGATCCACGGTTCATGACTGCGAC
CGTGACAACGCCTATAAAGCATTCAATTGCCCTTTGCAGCAGAAGACCGC
TGACGCGCATCTCGTTTTTTGGGTATCATTTGTCCGCGTCGGTCTTCCTG
TCTCGTGCATGTTGAATACCGGTGCAGTTCGGCTGTTCCATTTTGATATC
TGTCTTACTGCGTGTCCAAGCCACTGAAATCGCCATAACTGCACTGTCCA
GTTACTTGGTATACAAGACACGTAGTGCAGGTATTTACCCGTTTTAGCGC
GGGATTGAGCTATTTGGAACCTTGGGACCGAAAAGGCAGCAGACAACTAC
AGTATCGACGGGAGCAGTTGCCGTGGGTAGTACAGTTTAATTTTTTTACT
TGCTCTAACTCTGGTTGACCTCTTGGGTACATTATTTTGTGGGGTGAATA
CTAACTTCTATTTTTTTATTCGAATATTATATGTGCTTTTGTTTTCTTAC
CCCTACTTGTATGATTTTAGGTGGAATCTATGATCTTCGGGGGGGTTAAT
GGTGTTGCATACGGCAATGTAGAAATTGGCGGTGTCTGTGCTGTATGGAT
ATATATATGTAATGTCCGAACTGGGCTCTATTGAAGACGACGCATATTAT
AATCATTTGTGGGCGTCATTTTCCCTGTTTTCGAGGTAAAAGTGAAAACG
GGATTAAATTGGAACAGGCATAAACAGGGTCAACTCCTTCGGGCTGCGGT
ACTTTTCGGAACATAGTTGGAAGATGAAGATTTACGTCCAATTCGTGTTT
AAAATCAACAGTTATCGAGCGTTTAATGGAGTGCCCAAAGACATGTTGGA
TTCTGAGGTCTGATGTAACCTATTATGTTCTATTATACGACAAAAAAAAT
GCCCCCAAAACAGATGTCAGGAGCAGATTTTCAAGGGCTGCGTCTCGAGA
AGGTTAAACTTCGAACATGAAACTTTGCTGGTCTCGCAACGCTTTTCCCG
CGCGGTAAACTCGTCCGGTCGTTCGTCGGCTGAGCCTCAAAGATGAGTTG
TGACGTAGCCGATCAAAATACATTTACGTATGAGTTCTCCATCATTGGCC
CAGTAAAATAAAGAGGCTCGTTCCACAATTTACCCTCGTGGTGAAGAACT
GCTGTGCAAATTGACACCATTTGTTTTTCAGTACGATCAGATTTAAAGGC
CTGATCAATAACACCCTTACATTCCCAAACAAAGTGCTATGAGAGACAGC
ACAGAGTAAACTCGCACTAGCTCGGATGACAAGCCTGATCTGTTTCATGA
TTCCATGCGCTAATGTCAGTTGTTGTATTGTACTGTCAGCTCATTGTGTG
TTCTTGTTCTGCGGAATTCTCGGTTCGATCGTTGTTTAGCCGAACCCTAT
TTTCAACTTTGGTGTTGTTGAGAATTTGTTTGGCGTTGGACTTCGATGGA
ATCAATACAAACAGTCAGCTAATGTACAGGTTAGTGAGTGATTGAGGTTG
GCCAGGACACATATCACAATTAAAAAATCCTTGGTCATATTCCAGCACCA
CATGACCAAGAATCCTTTGTTCCACCCCCGGTGTGAAGAACAAGCCCCCC
CCTCTTTCCCGCGCAATTTTCAAGATGGCGAGTGTATCTCAAAACAGCTC
GTGGCGCGGAAAAGGTCGAATTTTGAGCGTTTCATTTTTGTATTTCAGAA
ATCACGGCGCAGCCTGTCGTAGATCTGTTTTGGGGCACTCATTTGGAACG
CTTGAAAAACTGCTGATTTTCGAGGCAACTCGGATTCGTAAAGTACTGCG
TCTCCAAGGAGTTAACTCGCGGAGATTAGCGCGTTGTTGACGCTTTTAGT
AGCAGATGCGAGATATCGTCACCACGTATATGTTGGAACGGTTGTACACG
CGCTCATAATTCGTCCTATTTCCCTATTGTTGTAAGGATATTGAGTGTTA
TATTAATTTCATGGTACAACAGGCGAGTTACGGCCTGTTGGTCATTCGCT
TAACATTGATTGTTTGTGCGCGACTGGTAAGATTTGAGTTGACCATCTCG
ACGTGTTCATCTTATTTTATGGTTAATGCTAAATCGTTCGATTTTTGACA
CGATTTATTCAAGTCCAGGGGTTATGTACTTGCTGTGTGTGACCAGCCGA
ACAGGTTGCCTTGGAATTCTGACCCGCCTTATCAGAGACCCCCTATTATA
TAGGAATTGTATCAATAGGGAGCGTTAGCACTAGGAAAGTGGACCTGCCT
TGGAATTGTGATATCTACCGTACCCGCCTAAACTCTTCATGATGTCACGA
TATGTAAGCCTCCTCAACTTGGGTGAAAACGGGTGGAAGTTTTGTAGTTG
TATGTATACAGGTAAATAATTGTACCCTGAGTTTTATTCTGCGTGCTGGC
ACTTACATGTTCCCTGCACACGCGTGTTTCATCAGGGCTACGCGTACGTG
GAGTTTGCTTCGCCAGAGGTTGCCGGCATCGTCGCCTCGACGATGAATGG
ATACTTTCTGTACAACAAGCAGCTCGTATGTCGTGTTCTCAAGTTCGAGG
AGATCCACCCGAGGCTGTTCGACGGGTCGGGACATAAATTCCGCAAGGTC
AACTGGCACGGGCTTTACAAACAGAAGGTCAACGCTGACAGGTGCGTGAA
ACGAACACAAGGGGCAGTATTTTTCGTACTCGCCTGCTGTTTGGTGGACT
GTGGGTTGAAGAGCGTGGGATCATGCATCGTTACTATGGTACACAGGCTT
CGAAATTCCGCAAATGATGACATGCATGACTCGACAAAACGCAGGACACA
CCCAGAGAGTGGCGGTATTTCGCACAGCATTGCACGTCACCCTCGCAGGT
TGTGTAATCATCGTGGCCACCATGATATTGGTATGCTGCAGGATTGATGT
GTTGTGGGAATCGTTTTCGAGAACGGCCTGACCCATGCTCATGGTGCATG
GCAGTGGTGCAGGTGCTTGACTTTTATCTATCTTCACAATCATGAGGCCT
GCAACTTTTCCCGTGTAGTTCGATAGCCGTAACAGTTGTAACGTGGTTTC
GATCTCAATCAGGACGACGCTTTTGCGTATCGAAAATCGGACTTGATGCG
AATATTGTTTTCACTAGCTTTCGCTTTCCTTTCAAAGCCGCGTTAGTTTA
GTGTGTCTGCGTTTCGATAATTGACCTCTTGCAAGCGGCGCCTGAAAGAA
TCCGAACAAGCAAAAGATGCCAGTTTATTGCTTGTATCTCACCAGCGGTC
AAGAATTCATATATTAATAGCATGCGGTACGAGTGTGAGGTTGGATCGGA
GAAGCCCCCCCGATGTCAATTTTTTCCAAGGTGCCTCATATGACCTGTAG
TGGATTATCCCGATGCGTCATGGAAACAGATTAGTGTGGCGATGGGCCGT
TTCAATGACGTTAGCTTGATGACTTCGCTCCATTTTGCGATTCAGCTCCC
CGTTTCCCTGCGAGGCCGTTCACTGTAGGCAAGGGTATCATTGTCGCCCA
TGTTGAAAGAGCAAGGCAGCCATTTTGGGACGAAAGCCAGCCACCTGGGG
CATGTACGATGCACAATCGTCCAAAGTATGGGTGTAGCTGTAGCGCCTCG
TTGAACCCCTGAAACGAAAAGTCCATTTTGTTAGCTGAAAAAACAAGGCT
ACCAAACTTTGAGCTAGGATTATAAACATGGCTTTTTCAACCTTGAAAGA
AACCTGCACCTGCACAACTTACCCATGAAAGTACGTACTACTCTCGTGAC
AAGATGAAAACGGAATTTTATTCCGTATTCCCTCGGTCCCGCTGAAAGTA
ACGGCTTTGAATTTACGAGCAGCAGCTTACGTGTGTCCCCACCCCTGAAG
AGCGAAGAGAAAAGCTTCACCCAATGCATACTTTGAAGCCTGATTCGTAT
GTCAGTTACTACCCTGTACCCCAAGGCCTGACTAGCCCGCCTCGCGACGG
ACATATGTGATGAGCACCCCGAGCATTCGTGCGACTTTGCTCAAGGTAGT
GTGGGACTCACACCCACCAGAATGTTCTCCGTCGTACGAGCGAGCTTTGG
TCCTAGTCCCCGCTCCTCTTATGAGCTCGTCTCATTCTTACACGGGCGGC
TACGTTTCGGCTCTTTCAATTTTTTGGTCAGGACACCAAAGGAGGACAAG
CAGCACACGAAGAGGTTGCTGGCGCGGGACTACCTGAAGCGAAATAAGCT
GGCCGCCAAAGGCATCGATTACGATTTCCCGGGGTTCGTGGCGACCCTCA
AAAATCGCGAGGTGGCAGAAGGGCCGTTTCAGCCTAAGCCGCAGAGTGGA
AACAAGACGGACGCGACGGTATGACATGTGCTATCGCCATTTCCCAGTAC
GTGACTGAAGTGGGGCTTGACTTTTGTGCCGCGTACACCGTACCATGGGG
TACGCTCAGCATCAACCATACCATTATTTTTTTGTGGGTGAAGAGGTCTC
TTATAACTTGATTGGTAGACGCACTTAGTATAGAGTAATCGATTTTAGCT
TGGGGGCAAATATCCAGACCCCACCCGATAATTCACTTTGTCGTTCCCGA
TCCATGCAGGAATTGAAAATCCGCAAGACATCGGATGCCACGGCTGATAA
CGCGACTACTGTCAACATGGACGAAGTCGTACCGGATGCTGCTACGGCAC
AATCAGAGGTCGTCGTTGGCGATGGCCAGAAAGCGAAGACGCCTTCCAAG
AAGAAGAAAATAAATGCCGAAACATCTGAGGAGAAGGGGAAGAAGGAAAA
TGTGGAAAACTCTGGAGAGACGAAGAGAAGCGAGGAAAACTCTGGAGAGA
CGAAGGGAAACGGGGAAAAGTCCAAGCTGAAAATGGGAAACGCGAAGAAG
ACCAAGGGCAAGAAAGGAAACGCGGAAAATTCGGAGAAGGGAAACGCGAA
AAACTCCGAAAAGAAGGGAAATGCGAAAAATTCCGAGAAGAAGGGAAACG
CGAAAAATTCCGAGAAGGAGGGAAACGCGAAAAATTCCGAAAAGAAGGGA
AATGCGAAAAATTCCGAGAAGGAGGGAAGCGCGAAAAATTCTGACAAGAA
GGGAAATGCGAAAAATTCCGAGAAGGAGGGAAGCGCGAAAAATTCCGAAA
AGAAGGGAAATGCGAAAAATTCCGAGAAGGAGAGAAGCGCGAAAAATTCC
GAAAAGAAGGGAAATGCGAAAAATTCCGAGAAGGAGAGAAGCGCGAAAAA
TTCCGAAAAAAAGGGAAACGCGAAAAATTCCGAGCAGGAGGGAAATGTGA
AAAATTCTGCGCAGGAGGGAAACGCGAAAAATTCCAAAAAAAAGGGAAAT
GCGACAAATTCTGACAATGAGGGGAACGCGAAAAAATCCGAAAAGGGAAG
TGCGAAAAATTCTGAGGAGGGAAACGCGGTAAACTCCAAGGGTAAGAAGG
GAAATGCGGAAAACACAAGTGGTTCGAAGAAGGAGTCAGGGAGCAAGAAG
ACGACCCCAACAGCAACCAAGACGTCAACGAAAAAAGCGAAATATACCCC
GCATCTTGTCGAGGAGGATACACCGCGCTTGTCACCATCTGCTGCGGACA
CCGACATGCCAAACACGGGGGGTTCGGGCGGCAGCAAGCAGAAAGCATCA
AGTAAGCAAAAGAAGTCCCCAAACGCCACACCCAATGGTTCGCCCGCGGT
AGTCTCCGCATCCAAGCAGGGGAAGAGCACGGCAACACCTGGGAGTTCTA
AAAAGCGACGGGCAGGGGAGGAAGAAGGAGTAGAGGCGAGCAGCGGAGAG
AAGACTAGTTCTGCTGGTAAAAAGAAACTAAAGGTTGCTAAGCGCTCCAA
AGCGCCCAAGTGACGTTGTTTTAGTTGGATATCCGGGCGGGGAGCGAGGG
AGGGAGAGGGGGAGTTGGCATGAGTCGGTGCTGTTCGATATTTCGTAGTT
TTGTCCCTATGGTAAGTATTGGTGGTGATCTTCCTGTGGTGTTGATGGGG
TGTCAATTGAGCGAAAAGAAGTGACTGCTGCTAAAAGGAAGTGAAAATTG
TCTTGGTAGATCTGAAACGGAAAGTTGACGTTTTAGGTAACAGACGCACG
ATTGGCGGATTTTTAGTAGTCCACATGCGTACTTAAGTAATCGAAGAAAT
GTTACCGCTTCGTCTCGTGTCTTGGCGTTTATAAACAGTCATCGAATCAG
GGCGAAAATTTAACGTTCAGAATTTTGGCGATGCGCGCTGGTCGATAGAA
TTGGTCGTATCGTCTCGTGCAATGGAATTAAGTGCCTACGCACAATGCGC
GCGATTGTTTCTCATGTGCACAACTGAACATTGGGTACTTCGATCCCAAC
GAGTTACGTGGAGCAAATTGTAATTCGGGACAGCGCCCCTGAGTTTTTGG
GTGTAACGATTGCTCTATTAATATTCTTGTTTATATATCTGTTCTGTATT
ACGTATACACAAGTTCCGCGTTCATTCAATGGCCTGGTTGAGAGACCCCT
ATCGTTACGTTGGAGCAACGTTGGTGGATTGATTGGGCATAGTTGACCGT
TTAACTGACACGGTTGATGAGCAGTGTGGGCGACGCTTCCCTCTTCTCAC
CTGTTGGTATAAGTGCCATTGAGTATTAGTACTAAAGCGTATTGTTGTCA
TATAATTAGCTTGTGAAACTGTCACTTGTCTAAGGTAATGAACTACACGC
GGGAATAGATCAAAGAAATACTTGAAATTCAACATACAAGCGATCATCAG
AAACTACCCGAGAAGATCTTATCCTGACAAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1589:15909..25339+ >mRNA_H-paniculata_contig1589.3411.1 ID=mRNA_H-paniculata_contig1589.3411.1|Name=mRNA_H-paniculata_contig1589.3411.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2952bp|location=Sequence derived from alignment at H-paniculata_contig1589:15909..25339+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGAAGGTCATTCGCAAGGATCTGGAGGCCAAGTTACAGGCACTGAA
TGGCGAGGAATGGGACAGCATGTCAGAGGACGATATGTCCGACGACGATA
TCGTCACAGAGATAATAGGCAGCACCACCAAGGAAGACCTTACGCCATTG
CCTCTCCATATCCAGCAGAAGAAAGCCAAAGGAAAAAAAGGGGGGGGAGG
TGTAGCTGCTGGTGGTGGGTCTGTGGTGCCTGTAGGCCCTCATGGGGAGC
CCTCTGGGGTAATCTACATAGGCCACATCCCACACGGCTTTTATGAGGAA
GCGATGAATGGATTCTTCGGGCAGTTTGGGGATGTAGTGCGGGTGCGGCT
GTCCCGGAGCAAGAAGAGTGGGCGTTGCAAGATGGCGAAGGTCATTCGCA
AGGATCTGGAGGCCAAGTTACAGGCACTGAATGGCGAGGAATGGGACAGC
ATGTCAGAGGACGATATGTCCGACGACGATATCGTCACAGAGATAATAGG
CAGCACCACCAAGGAAGACCTTACGCCATTGCCTCTCCATATCCAGCAGA
AGAAAGCCAAAGGAAAAAAAGGGGGGGGAGGTGTAGCTGCTGGTGGTGGG
TCTGTGGTGCCTGTAGGCCCTCATGGGGAGCCCTCTGGGGTAATCTACAT
AGGCCACATCCCACACGGCTTTTATGAGGAAGCGATGAATGGATTCTTCG
GGCAGTTTGGGGATGTAGTGCGGGTGCGGCTGTCCCGGAGCAAGAAGAGT
GGGCGTTGCAAGGGCTACGCGTACGTGGAGTTTGCTTCGCCAGAGGTTGC
CGGCATCGTCGCCTCGACGATGAATGGATACTTTCTGTACAACAAGCAGC
TCGTATGTCGTGTTCTCAAGTTCGAGGAGATCCACCCGAGGCTGTTCGAC
GGGTCGGGACATAAATTCCGCAAGGTCAACTGGCACGGGCTTTACAAACA
GAAGGTCAACGCTGACAGGGCTACGCGTACGTGGAGTTTGCTTCGCCAGA
GGTTGCCGGCATCGTCGCCTCGACGATGAATGGATACTTTCTGTACAACA
AGCAGCTCGTATGTCGTGTTCTCAAGTTCGAGGAGATCCACCCGAGGCTG
TTCGACGGGTCGGGACATAAATTCCGCAAGGTCAACTGGCACGGGCTTTA
CAAACAGAAGGTCAACGCTGACAGGACACCAAAGGAGGACAAGCAGCACA
CGAAGAGGTTGCTGGCGCGGGACTACCTGAAGCGAAATAAGCTGGCCGCC
AAAGGCATCGATTACGATTTCCCGGGGTTCGTGGCGACCCTCAAAAATCG
CGAGGTGGCAGAAGGGCCGTTTCAGCCTAAGCCGCAGAGTGGAAACAAGA
CGGACGCGACGGACACCAAAGGAGGACAAGCAGCACACGAAGAGGTTGCT
GGCGCGGGACTACCTGAAGCGAAATAAGCTGGCCGCCAAAGGCATCGATT
ACGATTTCCCGGGGTTCGTGGCGACCCTCAAAAATCGCGAGGTGGCAGAA
GGGCCGTTTCAGCCTAAGCCGCAGAGTGGAAACAAGACGGACGCGACGGA
ATTGAAAATCCGCAAGACATCGGATGCCACGGCTGATAACGCGACTACTG
TCAACATGGACGAAGTCGTACCGGATGCTGCTACGGCACAATCAGAGGTC
GTCGTTGGCGATGGCCAGAAAGCGAAGACGCCTTCCAAGAAGAAGAAAAT
AAATGCCGAAACATCTGAGGAGAAGGGGAAGAAGGAAAATGTGGAAAACT
CTGGAGAGACGAAGAGAAGCGAGGAAAACTCTGGAGAGACGAAGGGAAAC
GGGGAAAAGTCCAAGCTGAAAATGGGAAACGCGAAGAAGACCAAGGGCAA
GAAAGGAAACGCGGAAAATTCGGAGAAGGGAAACGCGAAAAACTCCGAAA
AGAAGGGAAATGCGAAAAATTCCGAGAAGAAGGGAAACGCGAAAAATTCC
GAGAAGGAGGGAAACGCGAAAAATTCCGAAAAGAAGGGAAATGCGAAAAA
TTCCGAGAAGGAGGGAAGCGCGAAAAATTCTGACAAGAAGGGAAATGCGA
AAAATTCCGAGAAGGAGGGAAGCGAATTGAAAATCCGCAAGACATCGGAT
GCCACGGCTGATAACGCGACTACTGTCAACATGGACGAAGTCGTACCGGA
TGCTGCTACGGCACAATCAGAGGTCGTCGTTGGCGATGGCCAGAAAGCGA
AGACGCCTTCCAAGAAGAAGAAAATAAATGCCGAAACATCTGAGGAGAAG
GGGAAGAAGGAAAATGTGGAAAACTCTGGAGAGACGAAGAGAAGCGAGGA
AAACTCTGGAGAGACGAAGGGAAACGGGGAAAAGTCCAAGCTGAAAATGG
GAAACGCGAAGAAGACCAAGGGCAAGAAAGGAAACGCGGAAAATTCGGAG
AAGGGAAACGCGAAAAACTCCGAAAAGAAGGGAAATGCGAAAAATTCCGA
GAAGAAGGGAAACGCGAAAAATTCCGAGAAGGAGGGAAACGCGAAAAATT
CCGAAAAGAAGGGAAATGCGAAAAATTCCGAGAAGGAGGGAAGCGCGAAA
AATTCTGACAAGAAGGGAAATGCGAAAAATTCCGAGAAGGAGGGAAGCCG
CGAAAAATTCCGAAAAGAAGGGAAATGCGAAAAATTCCGAGAAGGAGAGA
AGCGCGAAAAATTCCGAAAAAAAGGGAAACGCGAAAAATTCCGAGCAGGA
GGGAAATGTGAAAAATTCTGCGCAGGAGGGAAACGCGAAAAATTCCAAAA
AAAAGGGAAATGCGACAAATTCTGACGCGAAAAATTCCGAAAAGAAGGGA
AATGCGAAAAATTCCGAGAAGGAGAGAAGCGCGAAAAATTCCGAAAAAAA
GGGAAACGCGAAAAATTCCGAGCAGGAGGGAAATGTGAAAAATTCTGCGC
AGGAGGGAAACGCGAAAAATTCCAAAAAAAAGGGAAATGCGACAAATTCT
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