prot_H-paniculata_contig15825.3385.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15825.3385.1
Unique Nameprot_H-paniculata_contig15825.3385.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1018
Homology
BLAST of mRNA_H-paniculata_contig15825.3385.1 vs. uniprot
Match: D7FXP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP6_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.130e-44
Identity = 285/851 (33.49%), Postives = 354/851 (41.60%), Query Frame = 0
Query:    1 NRATFPTPVTQKRTSGSWSGCGNYLAVSSGGEIRVYRPWPTG-----LAAVKTGCGAVNSKAQARNGGLV----RDGWIAPNRPSARAVVDSSRHRCGVPSTSHTDMNVTAQDG---EGGGSTSPCVSGT--EFRTVLCVEALMKAVSGGASGSSSPMSSXXXXXXXXXXXXXSRMRRSLAPLRKAESLNAKSMSVAEDHDRLLSSLQVEEETPAVFGLCSRKKGGXXXXXXXXXXXXXXXXXXXSSPA--IGDMRAMCPGGPNAFFGTTDGCLGLGSLLGGLGLPYSPAVDTQSRRCLNDSFFGSSNARGGHGGGGTLAGDTLLASGVVDNSNKRAEAEEEPAAALGMETSAVSRTDSVTGYISGGLQLPEPXXXXLTARRRGGFRNVLPGQNWQAGVLRPT---------RSKGKDP-TAETPRRTKSQPRSSAFLSDPGVTAAAKVSALSLGEAGAVAHGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVDAGSSPPSSEVLDLRGKLGDGS-------IAVHAVHPLLRLPLGGEGEGGGGAAITNVSCRSLAPVGGDTGPGVMDEKEHGSVGNGTGRG-PLGDRKDSS---RQPCLVLVTTGFPDSGQKVPGTGESGRGAVDVKAVATLPPALSSPDLVAASEDGTLVCVGSHACELVACYRVGLPSADTSTVIAPPSVWYSASCPSKTRSRKRRVCPARAICTLRLPQGLRAKGLVF-----ANGESPESAG-NKSSGGEGLLSRRGIM-----VLVLAAAPVAAPFATLSRGARSSFGSSMRADRASSXXXXXXXXXXXXXXXXXXXXXXXXXSHVSSYRTVLLRYLLPAMAVDDAQG 803
            +R   P PV +KRT G+WSGCG  LA+SSGGEIRVY     G     ++      G V S+      GL     R GW +P                     +     V  + G   EG    + C  G   +FRT+LCVEA M     G    SSP SS                R S +PL       A+S        R+ +     +  P       R   G            XXXX   SS    IGDMRAMCP G   FFGTT G LGL S           A+   +     +  F       G GG  T  G+ LL + VVD+SNK                +A S  D+V+                  A RRGGFR+ LPG+NW AG LRPT         R +G+D  + E+P          A L +   TAA +  ++  GE+   +  SS             XXXXXXXXXXXXXXXXXXX                 GKLG+G+       +   + HPL RL L G GE    +     S  SL   G             G +G  +GR  P   R   S   R+PCLV V+     SG         G G V V  + +LP  L+SPDL+A+SEDG +V VGSHAC+LVACYR+    A  +T    P    S  C S TR RKRR   A  +CTLRLP G RAKGL+      A GES  + G N S+ GEG  +  G+M     VLVLA   V++  AT+  GA     ++ R D   S                            SSYRT LLR+ LPA       G
Sbjct:  271 SRVVLPAPVVRKRTCGAWSGCGRRLALSSGGEIRVYSDPSEGGSRRPISTAGQARGGVESETVDDAPGLQPAKPRSGWASPGSAXXXXXXXXXXXXXXXXXXALPSATVAREGGLVAEGETGLTGCSGGASRDFRTILCVEAAM-----GGGVFSSPGSSPGST------------RSSPSPLADGGG-GARSGGDGTGLTRIGAPPGTRKSRP------ERASDGTHSSVGPLSPPPXXXXAGVSSSRLLIGDMRAMCPAGSLTFFGTTGGGLGLDS-----------AIAASAPTLSGEPLFA------GGGGQTTHVGEGLLCA-VVDSSNKAC--------------AASSSIDTVSAE--------------KPATRRGGFRHSLPGENWLAGSLRPTSRTLLPNSPRRRGRDSGSPESPLALPVGSSPVAPLEERSSTAAEE--SVPAGESRPTSSESSLLRSTIPAVVDRRXXXXXXXXXXXXXXXXXXXX----------------GKLGNGADGGGAAGMPTPSTHPLFRLSLPG-GEDAASSPAVGSSSISLRDSG----------NRLGRMGTASGRNSPAAGRTTDSTPGRRPCLVRVSC---RSG--------GGDGVVGVATLTSLPSELASPDLLASSEDGRIVAVGSHACDLVACYRLESHPASPATESCLPG--GSGGCESGTRRRKRRHRRAVPLCTLRLPTGYRAKGLMLSRERQARGESAATPGVNSSASGEGATAEDGVMADEVVVLVLAGCAVSSVDATI--GA-----TTPRPDMNESSFAAESHWRGSNSGRPEE----------SSYRTTLLRFSLPAAPATTGNG 992          
BLAST of mRNA_H-paniculata_contig15825.3385.1 vs. uniprot
Match: A0A6H5KXC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC0_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 6.020e-36
Identity = 260/886 (29.35%), Postives = 326/886 (36.79%), Query Frame = 0
Query:    1 NRATFPTPVTQKRTSGSWSGCGNYLAVSSGGEIRVYRPWPTG-----LAAVKTGCGAVNSK----AQARNGGLVRDGWIAPNRPSARAVVDSSRHRCGVPSTSHTDMNVTAQDGEGGGST-----------------------------------------SPCVSGT--EFRTVLCVEALMKAVSGG--ASGSSSPMSSXXXXXXXXXXXXXSRMRRSLAPLRKAESLNAKSMSVAE-DHDRLLSSLQVEEETP---AVFGLCSRKKGGXXXXXXXXXXXXXXXXXXXSSPAIGDMRAMCPGGPNAFFGTTDGCLGLGSLLGGLGLPYSPAVDTQSRRCLNDSFFGSSNARGGHGGGGTLAGDTLLASGVVDNSNKRAEAEEEPAAALGMETSAVSRTDSVTGYISGGLQLPEPXXXXLTARRRGGFRNVLPGQNWQAGVLRPTRSKGKDPTAETPRRTKSQPRSSAFLSDPGVTAAAKVSALSLGEAGAVAHGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVDAGSSPPSSEVLDLRGKLG---DGSIAVH----AVHPLLRLPLGGEGEGGGGAAITNVSCRSLAPVGGDTGPGVMDEKEHGSVGNGTGRGPLGDR-----KDSSRQPCLVLVT--TGFPDSGQKVPGTGESGRGAVDVKAVATLPPALSSPDLVAASEDGTLVCVGSHACELVACYRVGLPSADTSTVIAPPSVWYSASCPSKTRSRKRRVCPARAICTLRLPQGLRAKGLVF-----ANGESPESAG-NKSSGGEGLLSRRGI-----MVLVLAAAPVAAPFATLSRGARSSFGSSMRADRASSXXXXXXXXXXXXXXXXXXXXXXXXXSHVSSYRTVLLRYLLPAMAVDDAQG 803
            +R   P PV +KRT G+WSGCG  LA+SSGGEIRVY     G     ++A     G V S+    A +      R GW +P   +A A                                                                         + C  G   EFRTVLCVEA   A+ GG  +S  SSP  +             +R       L + ++L     S  E D D   SS+      P   A  G+ S +                          IGDMRAMCP G  AFFGTT G LGL S +   G   S                G     GG GG  T  G+ LL + VVD+SNK                +A S  D+++                  A RRGGFR+ LPG+NW AG LRPT    +     +PRR     RS  F S          S L+L    +                                       V   S+ P  EV+DLRGKLG   DG  A      + HPL  L L     GG  AA +        P  G +G  + D                          S R+PCLV V+  +G  D             G V V  +A LP  L+SPDL+AASEDG +V VGSHAC+LVACYR+    A  +T    P     +   S TR RKRR   A  +CTLRLP G RAKGL+      A GES  + G + S+ GEG  +  G+     ++LVLA   VA+  AT+         ++ R D   S                            SSYRT LLR+ LPA       G
Sbjct:  295 SRVVLPAPVVRKRTCGAWSGCGRRLALSSGGEIRVYSDPSEGESRRPISAAGQARGGVESETVGDAPSLQPAKTRSGWASPGSVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXARYRLTSCSGGASREFRTVLCVEA---AMGGGVFSSPGSSPGGTLSPLSPLADGGGGARSGGDGTGLTQTDALPGTRRSRPERDSDGAHSSVGPLSPPPPAAATAGVSSSRL------------------------LIGDMRAMCPAGSLAFFGTTGGGLGLDSAIAASGPTLS----------------GEPLLAGG-GGQTTHVGEGLLGA-VVDSSNKAC--------------AASSSIDTISA--------------DKLATRRGGFRHALPGENWLAGSLRPT---SRTLLPNSPRR-----RSRDFGSSE--------SPLALPVGSSPVAPLEERSSKAAEESVPIGEPRPTSSESSLLRSTIPDVVGRRSTTP--EVVDLRGKLGNWADGGGAAGMPTASTHPLFCLSL----PGGEDAASS--------PAVGSSGISLRDSXXXXXXXXXXXXXXXXXXXXTTDSTSGRRPCLVRVSCRSGGVD-------------GVVGVATLAFLPSELASPDLLAASEDGRIVAVGSHACDLVACYRLESHPASPATESCLPGGGRGSE--SVTRRRKRRHRRAVPLCTLRLPTGYRAKGLMLSREKQARGESAATPGVHSSASGEGSTAEHGVTADEVVILVLAGCAVASVDATIGT-------TTPRPDMNESSFAAESHWRGSSSGRPEE----------SSYRTTLLRFSLPASPATTGNG 1045          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15825.3385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXP6_ECTSI1.130e-4433.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXC0_9PHAE6.020e-3629.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15825contigH-paniculata_contig15825:141..5118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15825.3385.1mRNA_H-paniculata_contig15825.3385.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15825 141..5119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15825.3385.1 ID=prot_H-paniculata_contig15825.3385.1|Name=mRNA_H-paniculata_contig15825.3385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1018bp
NRATFPTPVTQKRTSGSWSGCGNYLAVSSGGEIRVYRPWPTGLAAVKTGC
GAVNSKAQARNGGLVRDGWIAPNRPSARAVVDSSRHRCGVPSTSHTDMNV
TAQDGEGGGSTSPCVSGTEFRTVLCVEALMKAVSGGASGSSSPMSSPSPR
RSPSPELSPSRMRRSLAPLRKAESLNAKSMSVAEDHDRLLSSLQVEEETP
AVFGLCSRKKGGGGGGGGLSLRSRSSSSRSRSSPAIGDMRAMCPGGPNAF
FGTTDGCLGLGSLLGGLGLPYSPAVDTQSRRCLNDSFFGSSNARGGHGGG
GTLAGDTLLASGVVDNSNKRAEAEEEPAAALGMETSAVSRTDSVTGYISG
GLQLPEPPPPPLTARRRGGFRNVLPGQNWQAGVLRPTRSKGKDPTAETPR
RTKSQPRSSAFLSDPGVTAAAKVSALSLGEAGAVAHGSSSSSSNDNRSNS
NIILADASDSSSTTTTTTTTTFVDAGSSPPSSEVLDLRGKLGDGSIAVHA
VHPLLRLPLGGEGEGGGGAAITNVSCRSLAPVGGDTGPGVMDEKEHGSVG
NGTGRGPLGDRKDSSRQPCLVLVTTGFPDSGQKVPGTGESGRGAVDVKAV
ATLPPALSSPDLVAASEDGTLVCVGSHACELVACYRVGLPSADTSTVIAP
PSVWYSASCPSKTRSRKRRVCPARAICTLRLPQGLRAKGLVFANGESPES
AGNKSSGGEGLLSRRGIMVLVLAAAPVAAPFATLSRGARSSFGSSMRADR
ASSSARASGGSVGSGGSGGSGGGGSGSSSHVSSYRTVLLRYLLPAMAVDD
AQGAGVIPPQDFSSGFLSLKGDEPLPPSEDAAGASWALRHAARTEGSTSA
RKHSIQTFGQHGHTCQGRGDPAAKLPADQMPLTQHGNHIADFHSKRDPDT
GASLRDTSHKNKHDSDEGKDSAIHGTTAVAHSTRDQFYRVPLAPHNNNPG
AENSGENSGGSGGAGHTGEGNPREQADASAGSSGGLGVAEVTTIIRALDR
LEGRFSSRLDRIEKMLWD
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