prot_H-paniculata_contig15821.3382.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig15821.3382.1
Unique Name	prot_H-paniculata_contig15821.3382.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	155

Homology

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: D7G858_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G858_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 2.830e-79
Identity = 127/151 (84.11%), Postives = 138/151 (91.39%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVSEDEPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTLERSPREALE 151
            F  +VL+DLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVD+ GADALRLYEMFMGPLEA KPWQT QVAGVTRFRDRVYQLARRG  + E   ET+TILHKTMKKV+EDI++L+FNTAISA+MVLTNHLMT E+ PREALE
Sbjct:  602 FWHKVLHDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDSDGADALRLYEMFMGPLEATKPWQTEQVAGVTRFRDRVYQLARRGAEDVELAPETLTILHKTMKKVSEDIDELAFNTAISALMVLTNHLMTFEKPPREALE 752

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: A0A7S2YMF9_9STRA (Leucine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMF9_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.830e-67
Identity = 108/154 (70.13%), Postives = 125/154 (81.17%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVS--EDEPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTL-ERSPREALE 151
            F  QVL+DLGH   PEPFQ+LVHQGMILG+DGEKMSKSRGNV+NPDDIV+A G+DALR+YEMFMGPLEAVKPWQTSQVAG+ RF  +VY +     S  + E   ET+ I+HKTMKKVTEDIE +SFNTAISA+MV TNHL +L E  P EA+E
Sbjct:  108 FWHQVLFDLGHTTHPEPFQKLVHQGMILGSDGEKMSKSRGNVVNPDDIVNAQGSDALRMYEMFMGPLEAVKPWQTSQVAGIVRFMQKVYTVTSNAASNKKTEMDDETLRIMHKTMKKVTEDIESMSFNTAISALMVFTNHLQSLKENVPVEAVE 261

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: A0A7S1GQL5_CYCTE (Leucine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQL5_CYCTE)

HSP 1 Score: 214 bits (544), Expect = 1.010e-66
Identity = 106/152 (69.74%), Postives = 125/152 (82.24%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVSEDEPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTL-ERSPREALE 151
            F  QVL+DLG+ + PEPFQ+LVHQGMILGTDGEKMSKSRGNV+NPDDIV   GADALRLYEMFMGPLEAVKPWQTSQVAGV RF++++Y + R   +E E   ET  +LH+TMKKVTEDI  ++FNTAISA+M+ TNHL  L ++ PREA E
Sbjct:   50 FWHQVLFDLGYSQHPEPFQKLVHQGMILGTDGEKMSKSRGNVVNPDDIVQEQGADALRLYEMFMGPLEAVKPWQTSQVAGVVRFQNKLYNVVRNVNNEAEMDAETTKLLHQTMKKVTEDINAMAFNTAISALMIFTNHLQGLKDQVPREAAE 201

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: A0A7S2RFM0_9STRA (Leucine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFM0_9STRA)

HSP 1 Score: 224 bits (572), Expect = 7.890e-66
Identity = 112/154 (72.73%), Postives = 131/154 (85.06%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVSEDEP--GQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTL-ERSPREALE 151
            F  QVL+DLG+ + PEPF++LVHQGMILGTDGEKMSKSRGNV+NPDDIV+A GADALRLYEMFMGPLEAVKPWQTSQV+GV RF++++Y + ++ V  D+    +ET  ILHKTMKKVTEDIE +SFNTAISAMMVLTNHL +L E  PREA E
Sbjct:  651 FWHQVLFDLGYTQHPEPFKKLVHQGMILGTDGEKMSKSRGNVVNPDDIVNAQGADALRLYEMFMGPLEAVKPWQTSQVSGVVRFQNKLYSVVKKAVENDDVKMDEETTKILHKTMKKVTEDIESMSFNTAISAMMVLTNHLQSLKENIPREAAE 804

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: A0A7S4T2X0_9STRA (Leucine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T2X0_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.400e-65
Identity = 113/155 (72.90%), Postives = 129/155 (83.23%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVSE---DEPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTLERS-PREALE 151
            F  QVL+DLG+ K PEPFQ+LVHQGMILGTDGEKMSKSRGNVINPDDIV   GADALRLYEMFMGPLEAVKPWQTSQVAGV RF++++Y + +  V     DE  +ET  ILHK MKKVTEDIE+LSFNTAISA+MVLTNHL +L+ + P+EA E
Sbjct:  452 FWHQVLFDLGYTKHPEPFQKLVHQGMILGTDGEKMSKSRGNVINPDDIVLGQGADALRLYEMFMGPLEAVKPWQTSQVAGVVRFQNKLYNVVKAAVKNENADEMNEETTKILHKAMKKVTEDIENLSFNTAISALMVLTNHLASLKGNVPKEAAE 606

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: A0A6U3T6T3_9STRA (Leucine--tRNA ligase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3T6T3_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.750e-65
Identity = 114/155 (73.55%), Postives = 130/155 (83.87%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVSE---DEPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTLERS-PREALE 151
            F  QVL+DLG+ K PEPFQ+LVHQGMILGTDGEKMSKSRGNVINPDDIV   GADALRLYEMFMGPLEAVKPWQTSQVAGV RF++++Y + +  V     DE  +ET  ILHKTMKKVTEDIE+LSFNTAISA+MVLTNHL +L+ + P+EA E
Sbjct:  644 FWHQVLFDLGYTKHPEPFQKLVHQGMILGTDGEKMSKSRGNVINPDDIVLGQGADALRLYEMFMGPLEAVKPWQTSQVAGVVRFQNKLYNVVKAAVKNENADEMNEETTKILHKTMKKVTEDIENLSFNTAISALMVLTNHLASLKGNVPKEAAE 798

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: K0QYF4_THAOC (Leucine--tRNA ligase n=3 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QYF4_THAOC)

HSP 1 Score: 223 bits (567), Expect = 4.270e-65
Identity = 114/155 (73.55%), Postives = 126/155 (81.29%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVSED---EPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTLERS-PREALE 151
            F  QVLYDLG+ K PEPFQ+LVHQGMILGTDGEKMSKSRGNV+NPDD+VD  GADALRLYEMFMGPLEAVKPWQTSQVAGV RF +++Y + +  V      E   ET  ILHKTMKKVTEDIE +SFNTAISAMMVLTNHL  L+ + PREA E
Sbjct:  657 FWHQVLYDLGYTKHPEPFQKLVHQGMILGTDGEKMSKSRGNVVNPDDVVDVHGADALRLYEMFMGPLEAVKPWQTSQVAGVVRFMNKLYNVVQAAVDNGDSVEMDDETTRILHKTMKKVTEDIESMSFNTAISAMMVLTNHLQGLKGNVPREAAE 811

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: A0A7S2SQV0_9STRA (Leucine--tRNA ligase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQV0_9STRA)

HSP 1 Score: 211 bits (536), Expect = 7.400e-65
Identity = 105/151 (69.54%), Postives = 124/151 (82.12%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVSEDEPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTLERSPREALE 151
            F  +VL++LG  +  EPFQ+LVHQGMILG+DGEKMSKSRGNV+NPDD+V   GADALRLYEMFMGPLEAVKPWQTSQV+GV RFR+RVY LA R  + D   +ET  +LHKTM KVT+DI+ ++FNTAISA+MV  NHL TL+  PREALE
Sbjct:  106 FWHKVLHNLGVCQTAEPFQKLVHQGMILGSDGEKMSKSRGNVVNPDDVVKEHGADALRLYEMFMGPLEAVKPWQTSQVSGVVRFRNRVYALAARPTT-DSMDKETQVLLHKTMAKVTQDIDSMAFNTAISALMVFANHLATLDPVPREALE 255

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: A0A7S2G8Y0_9STRA (Leucine--tRNA ligase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8Y0_9STRA)

HSP 1 Score: 206 bits (524), Expect = 5.890e-63
Identity = 106/155 (68.39%), Postives = 123/155 (79.35%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLA--RRGVSEDEPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTLERS--PREALE 151
            F  +VL+ LG    PEPFQ+LVHQGMILG DGEKMSKSRGNV+NPDD+V   GADALRLYEMFMGPLEA KPWQTSQV GV RFR++V+ LA  R  +S++    ET  ILHKTMKKVTED+E+L+FNTAISA+MVL NHL  L+    PREA+E
Sbjct:  108 FWHKVLHQLGLTAAPEPFQKLVHQGMILGADGEKMSKSRGNVVNPDDVVKEYGADALRLYEMFMGPLEATKPWQTSQVTGVVRFRNKVFNLASMRYDLSDESMDDETARILHKTMKKVTEDVENLAFNTAISALMVLVNHLSGLKTRAPPREAVE 262

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BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Match: A0A1Z5K7R9_FISSO (Leucine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7R9_FISSO)

HSP 1 Score: 214 bits (544), Expect = 5.260e-62
Identity = 104/151 (68.87%), Postives = 123/151 (81.46%), Query Frame = 0

Query:    1 FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVDASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQL--ARRGVSEDEPGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTLERSPREA 149
            F  QVL+DLG+   PEPFQ+LVHQGMILG+DGEKMSKSRGNV+NPDDIV + GADALR+YEMFMGPLEAVKPWQTSQVAGV RF ++ Y +  +       E G ET+ +++KTMKKVTEDIE++SFNTAISA+MV  NHL +LE  PREA
Sbjct:  617 FWHQVLFDLGYTTHPEPFQKLVHQGMILGSDGEKMSKSRGNVVNPDDIVQSQGADALRMYEMFMGPLEAVKPWQTSQVAGVVRFMNKAYNIVVSAAATKHTEMGDETLRLMNKTMKKVTEDIENMSFNTAISALMVYANHLQSLETIPREA 767

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig15821.3382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G858_ECTSI	2.830e-79	84.11	Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A7S2YMF9_9STRA	1.830e-67	70.13	Leucine--tRNA ligase (Fragment) n=1 Tax=Amphiprora...	[more]
A0A7S1GQL5_CYCTE	1.010e-66	69.74	Leucine--tRNA ligase n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A7S2RFM0_9STRA	7.890e-66	72.73	Leucine--tRNA ligase n=1 Tax=Eucampia antarctica T...	[more]
A0A7S4T2X0_9STRA	1.400e-65	72.90	Leucine--tRNA ligase n=1 Tax=Ditylum brightwellii ...	[more]
A0A6U3T6T3_9STRA	2.750e-65	73.55	Leucine--tRNA ligase n=2 Tax=Ditylum brightwellii ...	[more]
K0QYF4_THAOC	4.270e-65	73.55	Leucine--tRNA ligase n=3 Tax=Thalassiosira oceanic...	[more]
A0A7S2SQV0_9STRA	7.400e-65	69.54	Leucine--tRNA ligase n=2 Tax=Rhizochromulina marin...	[more]
A0A7S2G8Y0_9STRA	5.890e-63	68.39	Leucine--tRNA ligase n=2 Tax=Dictyocha speculum Ta...	[more]
A0A1Z5K7R9_FISSO	5.260e-62	68.87	Leucine--tRNA ligase n=2 Tax=Fistulifera solaris T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..154
None	No IPR available	GENE3D	1.10.730.10		coord: 41..154 e-value: 1.3E-32 score: 115.2
None	No IPR available	PANTHER	PTHR43740:SF6	LEUCINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL	coord: 33..151
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 6..80
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..40 e-value: 3.2E-15 score: 58.3
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 11..60 e-value: 8.4E-14 score: 50.7
IPR002302	Leucine-tRNA ligase	PANTHER	PTHR43740	FAMILY NOT NAMED	coord: 33..151
IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	SUPERFAMILY	47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	coord: 94..142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig15821	contig	H-paniculata_contig15821:122..2640 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig15821.3382.1	mRNA_H-paniculata_contig15821.3382.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig15821 122..2640 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig15821.3382.1 ID=prot_H-paniculata_contig15821.3382.1|Name=mRNA_H-paniculata_contig15821.3382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
FGQQVLYDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDDIVD
ASGADALRLYEMFMGPLEAVKPWQTSQVAGVTRFRDRVYQLARRGVSEDE
PGQETMTILHKTMKKVTEDIEDLSFNTAISAMMVLTNHLMTLERSPREAL
EVTN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR002300	aa-tRNA-synth_Ia
IPR002302	Leu-tRNA-ligase
IPR009080	tRNAsynth_Ia_anticodon-bd