mRNA_H-paniculata_contig1581.3376.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: A0A6H5KU10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU10_9PHAE) HSP 1 Score: 387 bits (994), Expect = 1.720e-120 Identity = 278/668 (41.62%), Postives = 364/668 (54.49%), Query Frame = 2
Query: 200 EVAPVTQEQKRHLVERMATCDGPLACHVLQRCLQRYVSTTWKQNSDG--KRPIELEGWLISVLGVIVDCLEKVRDNNSETLTTARRLRCATFLLHMCSTILKTHRGASHPERAGQPPIL-LDTSTGDTPIEVDHRLNRAAIIATDNSEGIAEEYLVADVCAELSAECLRGMVQTTSEIMSVHQANVADVVSA-GAYAGGDVMFWVLALLSDVLKHYGEKEW--GLKGDLLPLSRERTGECVN-ENISAAPVSRTSETFAAKNQKLDAATKNHVPAIGPCCDILDLLSLASVVTSIPMEDGSGMVDVVLKWLEVTQLLLDAAEATTSSSTLEIIFTTVPAKLWRLTGCRRTLLPSDQPSTSPGAAFVDQHGASGALSQAMLRLTLSMIRVQSDGGLLAFQNEFEVGRCAQGRDEGRKSDDEGRIGLLRQERTAVPWSSAVEALSASCFVSCSDGKETGAGFGALLTRAFCDQDDALVDMLLTNLYIYRNARDQDAAVEAGLSELKSSRKCSGALRDLYRRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFATRMSGISHLQVEGGGDFDAMATGDEQD-------ERELVLSEEEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYEQCGDANE 2161
+V + K V+R+ CDGPLACH +QRCLQRY+ + S G R ELE WL ++L + CL + L A+RLRCA FLL + ST+LK RGASHPER+ P L GD P +AAI A + E IA A CA +A L GMV+ + +M + A G+ G D FWVL+L+SD LK+ + W G ++ R+R G+ E S P S T A +++LD VP LA V ++P+ G +D+VLKW+E LL++AAE T S + + +VP LWRL +LL ++ S SPG+AFV+ GA GAL+QAML L ++++ + G + D ++ D R G + + PW++AVEAL A+ S +D +E+ GF L R F DQDDALVDMLL NL I+ N A ++AG S+ S ALR LY LHP LFA+LL EV FD VLLDWL SPET FLQYLT+ LR AVAEWSDFA R+S + +E G D T DE+D ELVLSEEEA L +A+SCLSGL SAR L++ L+PYN+ PLL RIDQ+V LYE+CGDA +
Sbjct: 51 DVVSAPRNSKISFVQRLTLCDGPLACHAIQRCLQRYIYVCAEAISRGDVSRKGELEEWLAAILETTMFCLSRHGKFCERPL--AKRLRCAIFLLQLLSTVLKNERGASHPERSSHPTANHLPGLPGDAP--------KAAIAANNGWEKIA-----AQACAGEAANYLVGMVEAATALMLAGRNGAASSEDVEGSLGGADAGFWVLSLVSDSLKYLRKCSWRFGDPSSIVRCKRKRDGDAGGPETASDLPPSTT----AVVSEQLD------VPG------------LAEEVPAVPVGSGMDSMDIVLKWVE---LLVEAAE-TRWRSVMVGLLRSVPPTLWRLAN-NGSLLLQEESSRSPGSAFVEVRGADGALAQAMLGLVFRIVQLADERGPFDVAALVDARVVPNDEDRTKELDKRDRGGAPQNQ----PWTTAVEALVATATAS-ADDQESCLGFAGRLVRLFADQDDALVDMLLLNLRIFHNTAK--AELDAG-SDRPGSDLPPPALRTLYHGALHPGVLFAALLFEVRFDSGVLLDWLTSPETAFLQYLTMLLRFAVAEWSDFAARVSCARVVALEDGVDA-VQNTEDEKDMGEEXXXXXELVLSEEEANRLGRAMSCLSGLVASARALDRNGLMPYNIAPLLRRIDQVVSLYEECGDAEQ 667
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: D8LQ32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ32_ECTSI) HSP 1 Score: 351 bits (900), Expect = 6.460e-108 Identity = 253/592 (42.74%), Postives = 328/592 (55.41%), Query Frame = 2
Query: 443 ARRLRCATFLLHMCSTILKTHRGASHPERAGQPPI-LLDTSTGDTPIEVDHRLNRAAIIATDNSEGIAEEYLVADVCAELSAECLRGMVQTTSEIM--SVHQANVADVVSAGAYAGGDVMFWVLALLSDVLKHYGEKEWGLKGDLLPLS-----RERTGECVN-ENISAAPVSRTSETFAAKNQKLDAATKNHVPAIGPCCDILDLLSLASVVTSIPMEDGSGMVDVVLKWLEVTQLLLDAAEATTSSSTLEIIFTTVPAKLWRLTGCRRTLLPSDQPSTSPGAAFVDQHGASGALSQAMLRLTLSMIRVQSDGGLLAFQNEFEVGRCAQGRDEGRKSDDEGRIGLLRQERTAVPWSSAVEALSASCFVSCSDGKETGAGFGALLTRAFCDQDDALVDMLLTNLYIYRNARDQDAAVEAGLSELKSSRKCSGALRDLYRRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFATRMSGISHLQVEGGGDFDAMATGDEQDERE----------LVLSEEEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYEQCGDANE 2161
A+RLRCA FLL + ST+LK RGASHPER+ PP L GD P A A+D E IA A CA + L GMV+ + +M + A ++ V G+ G D FWVL+L+SD+LK ++ W GD P+S R+R + E S P S T A +++LD VP L+ V ++P+ G +D+ LKW+EVTQLL++AAE S +E++ +VP LWRL +LL ++PS SPG+AFV+ GA GAL+QAML L ++R+ + G +VG D D R G + + PW++AVEAL A+ D +E+ GF L R F DQDDALVDMLL NL I+ N A ++ G S+ +S ALR LYR LHP LFA+LL EV FD VLLDWL SPET FLQYLTL LR AVAEWSDFATR+S + +E G D A + Q E+E LVLSEEEA L +A+SCL GL SAR L++ L+PYN+ PLL RIDQ+V LYE+CGDA +
Sbjct: 18 AKRLRCAIFLLQLLSTVLKNERGASHPERSSHPPANQLPGLPGDAP--------NPAFAASDGWETIA-----AQACAREATTYLVGMVEAATALMLGGRNGATSSEDVE-GSLGGADAGFWVLSLVSDILKCLRKRNWRF-GD--PISFVRCKRKRDSDTGGPETASGLP----SSTTAVVSEQLD------VPG------------LSEAVPAVPVGSGMDSMDIALKWVEVTQLLVEAAETRWRSVLVELL-RSVPPTLWRLAN-NGSLLLQEEPSRSPGSAFVEVRGADGALAQAMLGLVFRIVRLGDERGPFHVAALVDVGVVPNNEDRTEDLDKRDRGGAPQNQ----PWTTAVEALVATATAR-DDDQESCLGFAGRLVRLFADQDDALVDMLLLNLRIFHNTTK--AELDTG-SDRPASDFPPPALRTLYRGALHPGVLFAALLFEVRFDSGVLLDWLTSPETAFLQYLTLLLRFAVAEWSDFATRVSCAKGVVLEDGVD----AVQNTQHEKETXXXXXXXXXLVLSEEEANRLGRAMSCLGGLVASARALDRNGLVPYNIAPLLRRIDQVVSLYEECGDAEQ 556
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: E9GRQ0_DAPPU (Uncharacterized protein n=4 Tax=Daphnia TaxID=6668 RepID=E9GRQ0_DAPPU) HSP 1 Score: 75.1 bits (183), Expect = 3.320e-10 Identity = 56/198 (28.28%), Postives = 90/198 (45.45%), Query Frame = 2
Query: 1568 LTRAFCDQDDALVDMLLTNLYI----YRNARDQDA---AVEAGLSELKSSRKCSGALRDLYRRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFATRMSGISHLQVEGGGDFDAMATGDEQDERELVLSEEEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYE 2140
+ + F DQDD+L++ +L +L I Y N R +A +++ GL +LK + L+P + L V++D +VLLD L+S ETCFL YL L+ W DF +S ++H Q+E ++C L + R L + L PYN+ P++ +++ ELYE
Sbjct: 519 MVKMFHDQDDSLIETMLCSLDINNGLYSNCRGLNATSNSLQTGLLDLKGT--------------LNPVQTWLKFLETVSYDTDVLLDLLVSNETCFLLYLLRLLKFIRRNWEDF---LSVLTHRQLED------------------------------VMTCFIRLRIAIRRLVAKNLFPYNIGPIVKLLEKCEELYE 669
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: A0A6L5DLD1_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5DLD1_9INSE) HSP 1 Score: 68.6 bits (166), Expect = 3.290e-8 Identity = 64/204 (31.37%), Postives = 87/204 (42.65%), Query Frame = 2
Query: 1568 LTRAFCDQDDALVDMLLTNLYIYRNARDQDAAVEAGLSELKSSRKCSGALRDLYRRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFATRMSGISHLQVEGGGDFDAMATGDEQDERELVLSEEEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYEQCGDANECDVGDY 2179
+ + F DQDDALV+ ++ L VE GLS ++ S LR L P FA L V+ D EVLLD L+S ETCFL YL FL+ A +W +F +SG +REL ++ L L S L + L PYN+ P+L +++ +YE VGDY
Sbjct: 456 VVQLFSDQDDALVEGMVCCL-----------DVEVGLSVAPATSVASNTLRAA----LSPTQTFAQFLRTVSHDHEVLLDLLVSNETCFLLYLLRFLKYARRQWGEF---VSGC---------------------DREL----------ENIMTVLIRLRISINRLVSKALFPYNIRPVLRLLERCEHMYE---------VGDY 601
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: A0A1D2NA82_ORCCI (Uncharacterized protein n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NA82_ORCCI) HSP 1 Score: 68.6 bits (166), Expect = 4.380e-8 Identity = 56/201 (27.86%), Postives = 89/201 (44.28%), Query Frame = 2
Query: 1559 GALLTRAFCDQDDALVDMLLTNLYIYRNARDQDAAVEAGLSELKSSRKCSGALRDLYRRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFATRMSGISHLQVEGGGDFDAMATGDEQDERELVLSEEEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYEQCGDANE 2161
G + + F DQDDAL++ +L L ++ + + +++S DLYR L+P F S ++ + D +VLLD L+S ETCFL YL FL+ A W+ F + G D D + + L + + L +R L PYN+ P+L +++ E+YE G+ NE
Sbjct: 838 GEWIVKLFSDQDDALIEGMLCALDTFQTFKGR----------IQTS--------DLYRS-LNPTVTFNSFVTTICGDPDVLLDLLMSNETCFLLYLLRFLKYAYRNWNSFVSSC----------GRDLD------------------------RIMGLLIRVRMAVGRLVERSLFPYNINPVLRLLERCEEMYETNGENNE 985
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: A0A0S7K969_9TELE (LINES (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7K969_9TELE) HSP 1 Score: 63.9 bits (154), Expect = 2.880e-7 Identity = 66/250 (26.40%), Postives = 99/250 (39.60%), Query Frame = 2
Query: 1568 LTRAFCDQDDALVDMLLTNLYIYRNARDQDAAVEAGLSELKSSRKCSG-----ALRDLYRRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFAT--------RMS---GISHLQVEGGGD------------------FDAMATGDEQDERELVLSE------------------------EEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYEQ 2143
++ F +QDD L++ A A LS S R+CSG L +P F LL ++FD +LLD+LIS ETCFL+Y +L+ +W FA R++ G H + + GD +D+ E+ LSE E+ +LL +A+SCLS L L+ +QL PYN + LL + Q+ Y++
Sbjct: 60 ISLLFGEQDDDLIE-----------------AASASLSIFISCRRCSGWDSHSVLDAACASGCNPHCHFVLLLQSLSFDHSILLDFLISSETCFLEYFVRYLKYLRGDWPGFAAACRHRDVKRLADAHGCEHGEGQQPGDSVPSLEGSNSGVGLRLVEYDSSDESSEETPDGYKLSETTAALMTDRSSKLKTKPSLSAIQSEKVDLLDRAVSCLSELRQVVMRLQTKQLFPYNPSSLLKLLAQVENCYQR 292
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: A0A6P7GZK9_DIAVI (protein lines n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7GZK9_DIAVI) HSP 1 Score: 65.5 bits (158), Expect = 3.460e-7 Identity = 58/200 (29.00%), Postives = 80/200 (40.00%), Query Frame = 2
Query: 1556 FGALLTRAFCDQDDALVDMLLTNLYI-----YRNARDQDAAVEAGLSELKSSRKCSGALRDLYRRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFATRMSGISHLQVEGGGDFDAMATGDEQDERELVLSEEEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYE 2140
F +L F DQDD +++ ++ L I YRNA D L+P F L V+ D E+LLD+L+S ETCFL YL FL+ WS F + EG + + G+E D+ +S L L L R L PYN+TP+L ++ LYE
Sbjct: 600 FSKILVHLFSDQDDYMIEAMVCTLDITVGISYRNAVYPDLI-----------------------NMLNPIHSFIEFLKVVSHDPEILLDYLVSNETCFLLYLLRFLKFTKRNWSKFISSCG-------EG-----STSRGNELDD---------------TMSVLIRLKMQISRLVSRDLFPYNITPILRLLEVCENLYE 749
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: A0A384BU99_URSMA (Lines homolog 1 n=15 Tax=Caniformia TaxID=379584 RepID=A0A384BU99_URSMA) HSP 1 Score: 65.5 bits (158), Expect = 3.470e-7 Identity = 37/114 (32.46%), Postives = 58/114 (50.88%), Query Frame = 2
Query: 1568 LTRAFCDQDDALVDMLLTNLYIYRNARDQDAAVEAGLSELKSSRKCSGALRDLYRRYLH-----PASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFAT 1894
++R F +QDD +++ +L IY Q A E+ E ++++ + H P +F LL + FD VLLD+LIS ETCFL+Y +L+L +W+ F T
Sbjct: 438 ISRVFIEQDDDMLEAARASLGIYLKLTRQSKATESSTQE-----------KEMWNHHTHEYGYNPHCIFLFLLKNIGFDSSVLLDFLISSETCFLEYFVRYLKLLQKDWAHFFT 540
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: A0A8K0KGR2_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KGR2_LADFU) HSP 1 Score: 65.1 bits (157), Expect = 4.290e-7 Identity = 58/192 (30.21%), Postives = 79/192 (41.15%), Query Frame = 2
Query: 1580 FCDQDDALVDMLLTNLYIYRNARDQDAAVEAG----LSELKSSRKCSGALRDLY-RRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFATRMSGISHLQVEGGGDFDAMATGDEQDERELVLSEEEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYE 2140
F DQDDALV+ ++ L D AV G + + + S L+ RR L PA+ F L V+ D EVLLD L+S ETCFL YL FL+ A W + + I + L +AI L L L + L PYN+ P+L +++ LYE
Sbjct: 523 FSDQDDALVEGMVCCL---------DVAVGLGGPGPIPGVSAGGHGSALPPSLFIRRALSPAATFLQFLHAVSHDAEVLLDLLVSNETCFLLYLLRFLKFARRNWEEVVHTAAAIGRNR------------------------------LGEAIGVLIRLRLLVERLVSKALFPYNINPVLRLLEKCEHLYE 675
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Match: UPI000E6E4064 (protein lines isoform X1 n=2 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E4064) HSP 1 Score: 65.1 bits (157), Expect = 4.400e-7 Identity = 56/200 (28.00%), Postives = 79/200 (39.50%), Query Frame = 2
Query: 1556 FGALLTRAFCDQDDALVDMLLTNL-----YIYRNARDQDAAVEAGLSELKSSRKCSGALRDLYRRYLHPASLFASLLSEVAFDCEVLLDWLISPETCFLQYLTLFLRLAVAEWSDFATRMSGISHLQVEGGGDFDAMATGDEQDERELVLSEEEAELLAKAISCLSGLADSARGLEKRQLLPYNLTPLLNRIDQIVELYE 2140
F +L F DQDD L++ ++ L +YRNA D A L+P S F L+ V+ D ++LLD+L++ ETCFL YL FL+ WS F M+ H G L + +S L L L R L PYN++P+L ++ LYE
Sbjct: 557 FSKILVHLFNDQDDYLIEAMVCTLDTTVGILYRNAVFPDLAT-----------------------MLNPVSFFIEFLNIVSHDPDILLDYLVNNETCFLLYLLRFLKYVRRNWSKFV--MTCHEHNNQNG---------------------------LDETMSVLIRLRLQIARLVSRSLFPYNISPVLRLLEVCESLYE 704 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1581.3376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1581.3376.1 >prot_H-paniculata_contig1581.3376.1 ID=prot_H-paniculata_contig1581.3376.1|Name=mRNA_H-paniculata_contig1581.3376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=713bp MTCIQQMIEAEGDAQLIMICGDLRYGGQAREQVSAAMSSGKSSSSQLSSGback to top mRNA from alignment at H-paniculata_contig1581:14214..19524- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1581.3376.1 ID=mRNA_H-paniculata_contig1581.3376.1|Name=mRNA_H-paniculata_contig1581.3376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5311bp|location=Sequence derived from alignment at H-paniculata_contig1581:14214..19524- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1581:14214..19524- >mRNA_H-paniculata_contig1581.3376.1 ID=mRNA_H-paniculata_contig1581.3376.1|Name=mRNA_H-paniculata_contig1581.3376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4278bp|location=Sequence derived from alignment at H-paniculata_contig1581:14214..19524- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |