mRNA_H-paniculata_contig10516.337.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10516.337.1
Unique NamemRNA_H-paniculata_contig10516.337.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig10516.337.1 vs. uniprot
Match: D7G1M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M4_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 5.480e-107
Identity = 195/260 (75.00%), Postives = 211/260 (81.15%), Query Frame = 1 
Query:    1 RVELRDVTRAIKIVKEQLQGAYQHETFNEQTGIGETKHGLPLGCLNIKLIRLEGIDGDPQATTIVISLRNSRQGDKTPPGPAHQASHPAEKCARTAGTSG-GGDGAGRRA--MVFNQVFVMAPIRSQDAELVFDVTQANHTSGSSPPLRSMVGAGEMGGRGTAGSGGHARSSAPKRAGSCRVSLRELADQREHDLPLIVLQKADSRWIPSAASLYVKLKFMYSKVVPLRNRIYTLQDRKRSVEKEITLLQIGGG-GATGE 768
            R ELRDVTR++KIVKEQLQGAYQHETFNEQTGIGETKHGLPLGCLNIKLIRL+G++GDP ATTIVISLRNSRQGDKTPPGPA QAS PAE+ +RT    G GGD A      MVF+QVFVMAPIRSQDAELVFDVTQA H SGSS   R         G G A         APKRAG+CRVSLRELADQREHDLPL VL+KA++RW+PS A LYVK+KFMYSKVVPLRNRIY LQDRKRSVEKE+TLLQIGGG G  G+
Sbjct:  956 RTELRDVTRSLKIVKEQLQGAYQHETFNEQTGIGETKHGLPLGCLNIKLIRLDGMEGDPHATTIVISLRNSRQGDKTPPGPALQASRPAERGSRTPAPPGRGGDSAASTVAGMVFSQVFVMAPIRSQDAELVFDVTQARH-SGSSSMSR---------GGGDAKXXXXXXXGAPKRAGTCRVSLRELADQREHDLPLTVLKKANNRWVPSPARLYVKVKFMYSKVVPLRNRIYALQDRKRSVEKEMTLLQIGGGTGGAGD 1205
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BLAST of mRNA_H-paniculata_contig10516.337.1 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA)

HSP 1 Score: 214 bits (544), Expect = 9.880e-59
Identity = 128/253 (50.59%), Postives = 158/253 (62.45%), Query Frame = 1 
Query:   22 TRAIKIVKEQLQGAYQHETFNEQTGIGETKHGLPLGCLNIKLIRLEGIDGDPQATTIVISLRNSRQGDKTPPGPAHQASHPAEKCARTAGTSGGGDGAGRRAMVFNQVFVMAPIRSQDAELVFDVTQANHTSGSSPPLRSMVGAGEMGGRGTAGSGGHARSSAPKRAGSCRVSLRELADQ----REHDLPLIVLQKADSRWIPSA-ASLYVKLKFMYSKVVPLRNRIYTLQDRKRSVEKEITLLQIGG--GGA 759
            TR +K  KEQLQ AYQ+E FNE TGIGETKHGLPLGCLN+KLIRLEG++ +P  T++V+SL   +QGD   PGP  QAS PAE+   +    GGG     + M FNQ          DAELVFDV               MV                A  + P+RAGSCR++LRELADQ     EHD PL + QK   +W P+  A L+VK KFMYSK+VPLRN+IY LQDRKR++E+EIT++++GG  GGA
Sbjct: 1813 TRLLKTAKEQLQTAYQNEMFNEATGIGETKHGLPLGCLNVKLIRLEGLESEPAQTSVVLSLSAIKQGDSAAPGPPPQASRPAERGRASLQAEGGGG----KVMEFNQ----------DAELVFDV---------------MV---------------KAAGAPPRRAGSCRIALRELADQLADQTEHDYPLTLQQKVAGKWEPAGGARLFVKAKFMYSKIVPLRNKIYALQDRKRTIEREITMVEMGGEDGGA 2021
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BLAST of mRNA_H-paniculata_contig10516.337.1 vs. uniprot
Match: A0A7S2XYS6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYS6_9STRA)

HSP 1 Score: 172 bits (435), Expect = 4.190e-49
Identity = 101/243 (41.56%), Postives = 141/243 (58.02%), Query Frame = 1 
Query:   25 RAIKIVKEQLQGAYQHETFNEQTGIGETKHGLPLGCLNIKLIRLEGIDGDPQATTIVISLRNSRQGDKTPPGPAHQASHPAEKCARTAGTSGGGDGAGRRAMVFNQVFVMAPIRSQDAELVFDVTQANHTSGSSPPLRSMVGAGEMGGRGTAGSGGHARSSAPKRAGSCRVSLRELADQREHDLPLIVLQKADS--RWIPSAASLYVKLKFMYSKVVPLRNRIYTLQDRKRSVEKEITLLQIG 747
            R IKI K+QL+ + + E FNE+TG+G TKHG+PLGCL ++LI +EGI   P+  ++++ L+ ++Q     PGP+ Q S PA     TAG   G        + FNQ F MAP+++QDAEL+ D+     T                                PKR GS  V LRELADQ+EHD  LI+ +++ +  R   + + LYVKLKF YSK+VPL+ +I+ LQDRKR  E+EITL ++G
Sbjct:    1 RDIKITKDQLKASMKTEYFNEETGVGATKHGVPLGCLTVRLILVEGIKRKPENISVILQLKGTKQDQAVQPGPSPQISRPA-----TAGKEKG-------QLQFNQQFTMAPVKTQDAELILDIMDKKAT--------------------------------PKRQGSAHVMLRELADQQEHDRHLIIQKRSATTGRMEVTNSRLYVKLKFTYSKIVPLKAQIFALQDRKRQAEREITLRRLG 199
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BLAST of mRNA_H-paniculata_contig10516.337.1 vs. uniprot
Match: A0A7S3XKI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKI6_HETAK)

HSP 1 Score: 164 bits (415), Expect = 6.440e-42
Identity = 104/245 (42.45%), Postives = 138/245 (56.33%), Query Frame = 1 
Query:   31 IKIVKEQLQGAYQHETFNEQTGIGETKHGLPLGCLNIKLIRLEGIDGDPQATTIVISLRNSR---QGDKTPPGPAHQASHPAEKCARTAGTSGGGDGAGRRAMVFNQVFVMAPIRSQDAELVFDVTQANHTSGSSPPLRSMVGAGEMGGRGTAGSGGHARSSAPKRAGSCRVSLRELADQREHDLPLIVLQKADS---RWIPSAASLYVKLKFMYSKVVPLRNRIYTLQDRKRSVEKEITLLQIG 747
            I+I K  L+   + E +NE TG+GETKHGL LG L IKLI  E +D  P  TT+VIS++ ++   +G    PGP  QAS PA +            GA  R + FNQVF MAPIR+QDAE+ FD+                                  +S+ PKR GSCR+ LRELA+Q+EH+  L V  +      + IP A  L+V+ +F YSKVVPL+  I+TLQD+KR +EKEITL ++G
Sbjct:  534 IRIAKRNLKSVMKTEVYNELTGVGETKHGLSLGVLTIKLILAEKVDAKPDETTVVISIKPTKAVSRGGLAEPGPPPQASKPARR------------GAEPRTLDFNQVFTMAPIRTQDAEVTFDIMD--------------------------------KSAKPKRKGSCRILLRELANQQEHEKYLNVQVRGPDGHFQTIPEAL-LFVRCQFTYSKVVPLKANIFTLQDKKRQIEKEITLRRLG 733
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BLAST of mRNA_H-paniculata_contig10516.337.1 vs. uniprot
Match: A0A7S4D560_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D560_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 1.300e-18
Identity = 73/238 (30.67%), Postives = 110/238 (46.22%), Query Frame = 1 
Query:    7 ELRDVTRAIKIVKEQLQGAYQHETFNEQTGIGETKHGLPLGCLNIKLIRLEGIDGDPQATTIVISLRNSRQGDKTPPGPAHQASHPAEKCARTAGTSGGGDGAGRRAMVFNQVFVMAPIRSQDAELVFDVTQANHTSGSSPPLRSMVGAGEMGGRGTAGSGGHARSSAPKRAGSCRVSLRELADQREHDLPLIVLQKADSRWIPSAASLYVKLKFMYSKVVPLRNRIYTLQDRKRSVE 720
            +LRD++  I+ +K  L  AY  E FN++TGI ETK GLPLGC+   L  + G++ D Q   + + L +++   K  P         AE         G  D         NQ+  + P+ +++AELV  V Q  HT         ++G G++                          L  L DQ  H + + +L +   RW+ +   L V LKF+YSKV+P+R R+  LQ +KR VE
Sbjct:  376 QLRDISVEIEKLKRDLYEAYDKEIFNKETGIAETKDGLPLGCVQATLHGISGLEEDGQMM-VELDLVSTKGQPKYLP--------VAESSDWFTTRQGMAD-------FLNQMCTLTPVGTKEAELVMKVHQVAHTG-----KEGVIGTGKL-------------------------HLHALEDQMPHQMDIPLLIQRGVRWVDTGVVLQVTLKFLYSKVLPIRQRVAALQAQKREVE 567
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BLAST of mRNA_H-paniculata_contig10516.337.1 vs. uniprot
Match: A0A8J2SE39_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE39_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 7.110e-14
Identity = 74/263 (28.14%), Postives = 126/263 (47.91%), Query Frame = 1 
Query:    7 ELRDVTRAIKIVKEQLQGAYQHETFNEQTGIGETKH--GLPLGCLNIKLIRLEGIDG--DP---QATTIVISLRNS----RQGDKTPPGPAHQASHPAEKCARTAGTSGGGDGAGRRAMVFNQVFVMAPIRSQDAELVFDVTQANHTSGSSPPLRSMVGAGEMGGRGTAGSGGHARSSAPKRAGSCRVSLRELADQREHDLPLIVLQKADSRW----IPS-AASLYVKLKFMYSKVVPLRNRIYTLQDRKRSVEKEITLLQIG 747
            +LR     + I + Q + A + E FNE  G+  ++   GL LG + + ++  E +    DP    +   V+ +R+     ++  + PPGPA Q S PA+K  R+         AG R MVFNQ F +AP+++  AE+  ++                                HA+     + GS  ++L +L+DQR+  L L +L+   +      IP  AA LYVK +F YS+++P++ RIY L + +R + ++   L++G
Sbjct:  914 KLRACESDVTIARSQYRVACKTEVFNEDCGVSYSRRTPGLALGMVTLTVLEAENVGQRHDPVNASSCRAVVHVRDPTPRHQRAYEGPPGPAPQVSKPAKKPPRSNELPEDLRSAGAR-MVFNQTFSLAPVKTSKAEIFIEIMD------------------------------HAKR---LKRGSTTIALSDLSDQRKQALTLSILRPTATTTAQFGIPQEAAVLYVKAQFQYSRILPIKRRIYRLLEGRRKITQDRQNLRLG 1142
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BLAST of mRNA_H-paniculata_contig10516.337.1 vs. uniprot
Match: A0A7S2BMY0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BMY0_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.840e-8
Identity = 72/257 (28.02%), Postives = 115/257 (44.75%), Query Frame = 1 
Query:    7 ELRDVTRAIKIVKEQLQGAYQHETFNEQTGIGETKH--GLPLGCLNIKLIRLEGIDGDPQA-----TTIVISLRNSRQ---GDKTPPGPAHQASHPAEKCARTAGTSGGGDGAGRRAMVFNQVFVMAPIRSQDAELVFDVTQANHTSGSSPPLRSMVGAGEMGGRGTAGSGGHARSSAPKRAGSCRVSLRELADQREHDLPLIVLQKADSRWIPSAASLYVKLKFMYSKVVPLRNRIYTLQDRKRSVEKEITLLQIG 747
            +LR     I  ++ QL+ A   E +NE TG+ E+    GL LG LN+ ++ L G+  + +      T I+++LR + Q    ++  P        PA   +R  GT    +   ++ +  NQ   +API++  AE+VFD+                                    S  KRA S  + L+EL  Q   D  L V  K       +  +L+V+  F YSKV P++ R+Y + + KR +EK+IT + IG
Sbjct:  517 QLRLTDNKIGDLRRQLKKAMSGELWNEVTGVSESTMVPGLALGMLNVTILSLSGVGTERKPMKADQTRIIVALRVNPQMSAEERAAPKGYEGPPGPAPVVSRK-GTEKTKNN--KKLIEINQEIQLAPIKTIKAEIVFDIVDER--------------------------------SRKKRA-SAVLPLKELGSQVSVDKSLKVNPKKGDEE-SAHGTLHVRAHFQYSKVKPIKERMYKVFEMKRHLEKDITNIMIG 736
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10516.337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G1M4_ECTSI5.480e-10775.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YL56_9STRA9.880e-5950.59Calcium-activated chloride channel-domain-containi... [more]
A0A7S2XYS6_9STRA4.190e-4941.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XKI6_HETAK6.440e-4242.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D560_HETAK1.300e-1830.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2SE39_9STRA7.110e-1428.14Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2BMY0_9STRA1.840e-828.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10516contigH-paniculata_contig10516:5066..8828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.3
Seed ortholog evalue2.5e-45
Seed eggNOG ortholog2880.D7G1M4
KEGG koko:K19327,ko:K19480,ko:K19497,ko:K19501
KEGG TC1.A.17.1,1.A.17.1.2,1.A.17.1.21,1.A.17.1.3
KEGG Pathwayko04740,map04740
Hectar predicted targeting categoryother localisation
EggNOG free text desc.intracellular chloride channel activity
EggNOG OGsKOG2514@1,KOG2514@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Exons4
Model size963
Cds size453
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10516.337.1prot_H-paniculata_contig10516.337.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10516 5249..7437 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928754.0547564-UTR-H-paniculata_contig10516:5065..52481622928754.0547564-UTR-H-paniculata_contig10516:5065..5248Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10516 5066..5248 -
1691480606.8829825-UTR-H-paniculata_contig10516:5065..52481691480606.8829825-UTR-H-paniculata_contig10516:5065..5248Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10516 5066..5248 -
1622928754.0990362-UTR-H-paniculata_contig10516:7437..75841622928754.0990362-UTR-H-paniculata_contig10516:7437..7584Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10516 7438..7584 -
1691480606.919634-UTR-H-paniculata_contig10516:7437..75841691480606.919634-UTR-H-paniculata_contig10516:7437..7584Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10516 7438..7584 -
1622928754.110992-UTR-H-paniculata_contig10516:8245..83681622928754.110992-UTR-H-paniculata_contig10516:8245..8368Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10516 8246..8368 -
1691480606.9284456-UTR-H-paniculata_contig10516:8245..83681691480606.9284456-UTR-H-paniculata_contig10516:8245..8368Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10516 8246..8368 -
1622928754.122146-UTR-H-paniculata_contig10516:8771..88281622928754.122146-UTR-H-paniculata_contig10516:8771..8828Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10516 8772..8828 -
1691480606.9363027-UTR-H-paniculata_contig10516:8771..88281691480606.9363027-UTR-H-paniculata_contig10516:8771..8828Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10516 8772..8828 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928754.0713992-CDS-H-paniculata_contig10516:5248..54311622928754.0713992-CDS-H-paniculata_contig10516:5248..5431Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10516 5249..5431 -
1691480606.898859-CDS-H-paniculata_contig10516:5248..54311691480606.898859-CDS-H-paniculata_contig10516:5248..5431Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10516 5249..5431 -
1622928754.0863159-CDS-H-paniculata_contig10516:7167..74371622928754.0863159-CDS-H-paniculata_contig10516:7167..7437Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10516 7168..7437 -
1691480606.9084-CDS-H-paniculata_contig10516:7167..74371691480606.9084-CDS-H-paniculata_contig10516:7167..7437Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10516 7168..7437 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10516.337.1

>prot_H-paniculata_contig10516.337.1 ID=prot_H-paniculata_contig10516.337.1|Name=mRNA_H-paniculata_contig10516.337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MVFNQVFVMAPIRSQDAELVFDVTQANHTSGSSPPLRSMVGAGEMGGRGT
AGSGGHARSSAPKRAGSCRVSLRELADQREHDLPLIVLQKADSRWIPSAA
SLYVKLKFMYSKVVPLRNRIYTLQDRKRSVEKEITLLQIGGGGATGERLT
*
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mRNA from alignment at H-paniculata_contig10516:5066..8828-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10516.337.1 ID=mRNA_H-paniculata_contig10516.337.1|Name=mRNA_H-paniculata_contig10516.337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3763bp|location=Sequence derived from alignment at H-paniculata_contig10516:5066..8828- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGGTGGAACTGCGGGATGTCACGAGGGCAATCAAGATAGTCAAAGAACA
ACTACAGGTGATGCTAAATTGCGTTCGCAATATAGACGGGAGGGGTACCG
ACAACCTGCGACGAACCTCCAGTCTAAAGGCGACTGTAAATAGCACCGTC
AAGTTGGTCTACTTCGGGGGTTTTCTTTACTCGTCAAGCTGCAGATTGAC
TGTATACTGTATGGGCTTTGATGCCAACTCTTTCAGAACGCTGTTCTGAG
TCTGCACGCTGCTGAAAGGCAGCTGAAAGAGATAGGATAGAAAACACGGA
ATGCGTATCGTTTCGGCAGAAGATTCACGCAGACATTGACGCGCTGAACC
CCCAGCCGACTCGTTTCTACTGCTTGAGTATGCGACCCGCCAACGGTTGA
TGGCCATGGTTGGTTTTTGATCTTGCGATTTTATTTTTGATGTGGCTGCG
TTTTCGAAAGGGGGCATATCAGCACGAGACTTTCAATGAACAGACGGGCA
TAGGCGAGACCAAGCATGGCTTGCCTTTGGGATGTTTAAACATCAAGCTC
ATAAGGCTGGAAGGCATCGACGGGGATCCGCAGGTAAGATTCGATTTGAT
GCAAGTCGAGGGACACAGAGCCGACTGCGCTAAACTACTAGGTTACCTCT
AAAGGCACTTTTGTGACGGCTTGAGTATGAGAAATCTGCGCAGGAGATTT
CGAGAATAACTTGCTGCGGGTCCATGCGCGGTGCGTGTTTGTATCTCTCC
CTCGCCGTTTGTGCTTATTTAATATGTGGTAAACTCGCAGTTTGGTGCTG
TCAAGTCCGCAACGCGCGCCACATATTCCGTGTGCTGTCAGTCACACTTG
CTGTATGCACAAGGGGATGGCCTCGTCATGACGTAGCCAGCAGCATCCGA
TATATTGCACGCGTGCCAGCCACTGCTCAGTCATTTTCGATATTCCTGTT
GTATCATACATGCCGATTAAGTTATACGAAGTGAGGGCAGCGCAGCTGTG
CTTGTGATACAGGTAGCTATTTTTCTCATTTCCTGATATTTATACCAAAC
AAGCGTCACCGATTTCGTAAATTGGTTCTACTATGATATGTCCATTGGTT
TTCACCCGAGTAAAGCATCCCAATCTCCGTAGACTCGAGTTTATGACCAT
ATATCAAAAATTGCGTGTGTCCTACTCTGATATACAAATCTCGGAAACGC
CATCCCCCCCGACCCCGATATCCTATCCCTACACCAAACCGAAGGCGACT
ACCATAGTTATATCTTTACGGAATTCTCGGCAAGGAGACAAAACACCGCC
AGGTCCAGCGCACCAAGCAAGTCACCCCGCCGAAAAATGCGCTCGAACGG
CGGGTACCAGTGGCGGCGGGGACGGGGCAGGTCGAAGAGCCATGGTCTTC
AATCAGGTGTTCGTGATGGCGCCGATTCGCTCTCAAGATGCTGAATTGGT
TTTTGACGTTACTCAGGCGAATCACACGTCAGGATCTAGCCCCCCTCTGA
GGTCAATGGTAGGAGCGGGGGAAATGGGTGGGAGGGGAACGGCGGGGAGT
GGAGGTCACGCTCGGTCTAGTGCGCCGAAGCGGGCCGGGAGCTGTCGCGT
GTCGCTGAGGGAGTTGGCAGACCAGAGGGAGCATGATCTTCCACTCATCG
TCTTGCAGAAGGTGACAAAGAAAATACGACAAGATGTACCGACCACTCTG
GCGTCCTGGCCACCATTAATTTATGCCTTGCTTGTTAGTTTTTGGATGGG
AAATAAATAATTGAAATGCCAAAAGCATACTGGTATATGTTCTGCTTAAT
ACCCCGGTAAGTCAAGTAGTCTTGTCCAGGGGTGGATCATCCGACAGTTG
AACTCACTTAGCTGCTGCACGACTCTCGTCCCACTCACAGCAATACGGAG
TACAGAGCAGTTATGTACTTACACGGAATGCCCTGGCCACCCGTGCCCAC
CATGGGATCGGGGGCAAACAGTAATGTTGCCGTAAGGTGACCATTTCTCT
ACGAATTAATGTTGCCCAGATGTCCTAGATGTGAAAGTCATACTGGTTGA
TGGATTTTGAACAATAAGGCAGCTATTGGACCAGTCCCTTTTGATGAACC
CATCCGTGGTAACAGGTACAAGAAGCGGCAGCAGCGTCCATGCCGGACAA
GAGCTATTGTTCACAGCGGGCGGTTCCAAGATTTTGTGGCAGATCGAAGT
ATTGTATTTAAATGAATCACGAGAACTTGGTCGTTAACACCGACCTAGAG
CAAGCTAGAGGCATGCATGAAAGCTTACGGAAAAACCGGTGGCACGATGT
TTTTGTCGAGTCATTCCAAAAAGTTGTTGGAAAGTCATCCGCATTCTATG
CATAGTCTGGAGTATGACTCCTGCTCACAAGTCCCAACCTGATCGGTGCT
ACCGTCGACGTTGATTCTTCATGGTTGTCCAGTGTAATGAGTTTATCCGT
ATCTTCTCACTGCGCGGTCCGATCAATGCTTTCGTAATTGTGTCACCCTT
TACGTTCGACCGCATCGTAGAAGGGTATAGATTTGAAGCTTCGCGATGGA
ATATTTCTTCTACTTAATTGATTCTAGCCGTTTGGGTGCCATTGTCCCCG
AATGATCTACATGTATCGTAAAGTCGACAAGTTGCGTTTCTGGAAAACGA
CGTTCTGGTTTTTTATCTTGGATTCGCCCACGATATATACATCGTGCACG
GGCTTGTTTTTGCACTCGTAAATGTCGTTTTGATACTTGTAGGTTACTCC
GAAGTTCTAATTCTATCAGGCGTTAAGTGAATGGTGTATCGCTTTGATTT
TAAACAACATCGCGGAGTAACAAATATTGCAGCTTCACGCTCATTTTCTT
GTCATCACAAAGAAGAGTGAAGAAATGATAGATGTCAGCTATCGAACCAA
AAAAGACTTCTCAAATCCAAAGTTACGGGCGGTACGTCATTTTCCAGAAT
GGCAACTTGGTCCGCTATCCCGAAGAAAAACGAAATAATATTAAGGATAG
GGAGTGTATCATACGTTCTCGATGTTGAACACTTGAATCGCCCCCTTCCG
CTGCCCCCCCACTCGCTGGGATAGCTGACTCTTCCCTCCCGGATGGACTG
TTTGAATTCTGGGATTGCGTAACGAACGCTGTAGCGGTTTAAGGAGATAA
AAATTGGCCTAAACAGGCAAGGGTTGACGTAGACAGGGTAGGCGAAAGAT
TTTTGAGCCACATTTGGCAGCGTAGGAAAAAGCGATCGACCGTCGGAAAA
CGCTCTGACCGGAACAAAGCCCCGTCCTCCTAAGGACACGTGGTCAACGG
TCCACAATTGCGGCATGAAAATATAAGTGCGCCTTCCTCCCCCGTGTCTG
TCCCCCCATCGATGGACGATTTCTCCTCACCTTTCGCTTTTTTACAGGCG
GACAGTCGATGGATCCCTTCTGCTGCAAGTTTATACGTGAAGCTGAAATT
CATGTACAGCAAGGTAGTGCCCCTGCGTAACCGCATCTACACGCTGCAAG
ACAGGAAACGCTCAGTCGAGAAAGAGATCACGCTGCTGCAGATTGGAGGG
GGGGGCGCTACCGGCGAGAGGTTGACCTGAAAAATGTAGATGGTGTTGAG
GGGCAGCATGTTAATTAGCTGTAAATGGAAGGAGGAGTAAGTATAGTCAA
TATGGACAAAATTGGAGAATGGCACAATATATACTTTCTTTTGTGCGGAT
ACTTCACAAACTAGTGGCAGCTGTTGTTTCTATTTGCTGTGGATGTACCT
TGTTTTGGGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig10516:5066..8828-

>mRNA_H-paniculata_contig10516.337.1 ID=mRNA_H-paniculata_contig10516.337.1|Name=mRNA_H-paniculata_contig10516.337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig10516:5066..8828- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCTTCAATCAGGTGTTCGTGATGGCGCCGATTCGCTCTCAAGATGC
TGAATTGGTTTTTGACGTTACTCAGGCGAATCACACGTCAGGATCTAGCC
CCCCTCTGAGGTCAATGGTAGGAGCGGGGGAAATGGGTGGGAGGGGAACG
GCGGGGAGTGGAGGTCACGCTCGGTCTAGTGCGCCGAAGCGGGCCGGGAG
CTGTCGCGTGTCGCTGAGGGAGTTGGCAGACCAGAGGGAGCATGATCTTC
CACTCATCGTCTTGCAGAAGATGGTCTTCAATCAGGTGTTCGTGATGGCG
CCGATTCGCTCTCAAGATGCTGAATTGGTTTTTGACGTTACTCAGGCGAA
TCACACGTCAGGATCTAGCCCCCCTCTGAGGTCAATGGTAGGAGCGGGGG
AAATGGGTGGGAGGGGAACGGCGGGGAGTGGAGGTCACGCTCGGTCTAGT
GCGCCGAAGCGGGCCGGGAGCTGTCGCGTGTCGCTGAGGGAGTTGGCAGA
CCAGAGGGAGCATGATCTTCCACTCATCGTCTTGCAGAAGGCGGACAGTC
GATGGATCCCTTCTGCTGCAAGTTTATACGTGAAGCTGAAATTCATGTAC
AGCAAGGTAGTGCCCCTGCGTAACCGCATCTACACGCTGCAAGACAGGAA
ACGCTCAGTCGAGAAAGAGATCACGCTGCTGCAGATTGGAGGGGGGGGCG
CTACCGGCGAGAGGTTGACCTGAGCGGACAGTCGATGGATCCCTTCTGCT
GCAAGTTTATACGTGAAGCTGAAATTCATGTACAGCAAGGTAGTGCCCCT
GCGTAACCGCATCTACACGCTGCAAGACAGGAAACGCTCAGTCGAGAAAG
AGATCACGCTGCTGCAGATTGGAGGGGGGGGCGCTACCGGCGAGAGGTTG
ACCTGA
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