mRNA_H-paniculata_contig10027.34.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10027.34.1
Unique NamemRNA_H-paniculata_contig10027.34.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 4.620e-93
Identity = 157/318 (49.37%), Postives = 204/318 (64.15%), Query Frame = 1
Query:   19 TLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFL-NHTDRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFWDGAHIFCGHRNLAYIFHPE 969
            +LD++QGYW MPL P+AQE FTM+   G+Y+P RVPQGV NATSY+QGTM  +L  L    C VW +DI  W  T ++L+  L ++L   +  G++ AAHK   +   ++ CGK Y    + HD +R  G A++RR  TAGEL+QFLQA NW+R S+P ++ +V PLRE LE  +  + +RT+  A N  I    WT     +WE A + V+ AV LYHP A ++ L+FPDASD    S VTQVP  E+        MSHEPL FLSG F+G+Q RW  VDKE +AI+STF RL Y+ W G HI   HRNLAYIF PE
Sbjct:  750 SLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPE 1064          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 6.410e-90
Identity = 163/319 (51.10%), Postives = 199/319 (62.38%), Query Frame = 1
Query:   19 TLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFL-NHTDRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQR-RWPVVDKEAYAIVSTFLRLPYMFWDGAHIFCGHRNLAYIFHPE 969
            +LDL+Q YWQ PL P+AQE FT+ T  G+YTP RVPQG+ NATSYFQ T+  +L GL    C VW +D+  W     +L+  L ++L+ L+  G+Y AAHK   F   +  CGK Y    V HDPER  G A+MRR  TAGEL+QFLQA NW+R S+P +A VV PLR  LE  L     RT+  A+N  I     T      W  A + V+ AV L HP    + L+FPDASD    S +TQVP ++L  G     M+HEP+ FLSG FKGAQ+ RW  VDKE YAIVSTF RL Y+ WD  HIF  HRNLAYIF PE
Sbjct:  848 SLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPE 1163          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.320e-62
Identity = 128/273 (46.89%), Postives = 164/273 (60.07%), Query Frame = 1
Query:    1 GTSVFCTLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDR-TRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLS 816
            G + F  LDL+QGYWQMPL   A+E F++ T +G++ PTRVPQ V NAT YFQ  M ++L GL    C VW +D   W     +L+  L  +L  LQ  GI+AAAHK   F  ++R CGK Y G  V+ DPER QG   MRR  TAG+L+QFLQA  W+R S+  LA V+EP+R +LE  +    R T+  A N  I    WT      W +A + V+ AV L HP+   + L+FPDAS+    S +TQVP EEL  G     M+HEPLAFLS
Sbjct:  495 GATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDGFAVLMFPDASEEHWGSFLTQVPQEELERGVSVEHMTHEPLAFLS 764          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6A4ZJ35_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ35_9STRA)

HSP 1 Score: 219 bits (558), Expect = 7.490e-61
Identity = 119/322 (36.96%), Postives = 180/322 (55.90%), Query Frame = 1
Query:   10 VFCTLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTD-RTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHP 966
            V+ +LD  +GYWQ+PL P +QE ++ +T  GV TPTRV  G  +A +Y QG + ++   LL +    W +D+  +AGT  EL++ LR VL    + G+     K   +      CGK      V+H P R QG   +    TA +L QFL A+NWMR ++P+   +V PL  +++      D R + A   + ++   W E+    +E     +   VPL HP  ++   ++ DAS+ F  +  TQVP E+L+   +D +  HEPLAFLSGAF+G+  RWP+V+KEA+A+V +  RL Y+     G  +F  HRNL Y+F+P
Sbjct:  437 VYFSLDWTKGYWQLPLHPDSQEYYSFMTPVGVVTPTRVLMGQSDAVAYCQGVVDELFGDLLMHGVLGWLDDLLGYAGTTTELLQLLRQVLGICHISGLKLHPGKCTFYTTRTIWCGKEISAEGVAHSPSRVQGLCGLEPPQTAADLQQFLCATNWMRANIPQYTELVAPLTRLMDIAAKAADSRKKTALTRVALSSVGWAEDHLTCFERVKATLQRMVPLSHPDPDKMVCLYTDASEGFWGAVATQVPSEDLALPANDQR--HEPLAFLSGAFRGSSERWPIVEKEAFAVVESCKRLEYLLIRPGGFRLFTDHRNLVYMFNP 756          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0WPP4_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPP4_9STRA)

HSP 1 Score: 214 bits (545), Expect = 6.910e-59
Identity = 119/324 (36.73%), Postives = 182/324 (56.17%), Query Frame = 1
Query:    4 TSVFCTLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHT-DRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHP 966
            + V+ TLD M+GYWQ+PL P++QE ++ +   GV TPTRV  G  +A +Y QG + ++   ++ +    W +D+  +A T  +LM  L+ +L   Q  G+     K   +  +   CGK      V+H P R QG   +    TA EL QFL A+NWMR ++PE + +V PL ++L+        R + A   ++++   W E+ A  +E+    +   VPL HP   +   ++ DASD F  +  TQVP ++L     + +  HEPLAFLSGAF+GA  RWP+V+KEA+A+V +  RL Y+     G  +F  HRNL Y+F+P
Sbjct:  791 SKVYFTLDWMKGYWQLPLHPESQEYYSFMMPIGVVTPTRVLMGQSDAVAYCQGVVDELFGEMIMHGLLGWLDDLLGYARTASDLMDLLKRMLAICQAYGLKLHPKKCAFYTTKTIWCGKEVSAEGVAHAPARVQGLCELEPPQTAAELQQFLCATNWMRANIPEYSALVAPLTKLLDIGAKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPEKMVCLYTDASDGFWGAIATQVPLDDLELVASEQR--HEPLAFLSGAFRGASERWPIVEKEAFAVVESCKRLEYLLIRPGGFRLFTDHRNLVYMFNP 1112          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0WP68_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP68_9STRA)

HSP 1 Score: 213 bits (543), Expect = 9.050e-59
Identity = 124/328 (37.80%), Postives = 180/328 (54.88%), Query Frame = 1
Query:    1 GTSVFCTLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLET---FLNHTDRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHPE 969
            G  VF TLD ++GYWQ+PL P+ Q  ++ +T  GVYTPT++  G  +A ++ Q  + ++   L+      W +D+  +A + ++L+  L  VL   Q   +     K   + +E + CGK      +SHDP R Q    M+   TA EL QFL A+NWMR S+P  A  V+PLR +L+          +T  A  ++ + R  WT E    +E     ++  VPL HP  +++  +F DAS     ++ TQVP E+L    D  K  HEPLAFLSG+F GA  RWPV++KEAYA+V +  RL Y+     G  +F  HRNL YIF+P 
Sbjct:  685 GMEVFFTLDWLKGYWQLPLHPECQMWYSFMTPFGVYTPTKILMGQTDAVAFCQSVVNELFGDLMYQGVLGWLDDLLGYARSAEQLLVLLEKVLHICQEYRLKMHPKKCDFYLKEAKWCGKVISSEGISHDPSRVQRLCEMKAPTTAAELQQFLCATNWMRASIPLYAQRVDPLRRLLDVATKIAGSAKKTALAKADLAVAR--WTAEHDECFEEVKATLARMVPLAHPSEDKAICLFTDASADHWGAACTQVPKEDLELTVD--KERHEPLAFLSGSFTGASSRWPVIEKEAYAVVESCKRLEYLLLRQQGFRLFTDHRNLLYIFNPR 1008          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0XQJ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQJ2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.090e-58
Identity = 122/326 (37.42%), Postives = 180/326 (55.21%), Query Frame = 1
Query:    1 GTSVFCTLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTRHAA-DNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHPE 969
            GT  + TLD  +GYWQ+PL   +QE F+ +T  GVYTPTRV  G  +A +Y Q  +  +   LL      W +D+   A +   L   L  VL      G+  +  K   +  E   CGK    A V+H P R QG   +    TA +L QF+ A+NWMR S+ +   +++PLR +L+  +     ++  A   + ++   W+++ AA +E A   ++  VPL HPR++    +F DASD F  +  TQ+P E+LS   +D +  H+PLAFLSG F GA + WP+V+KEAYA+V +  RL Y+     G  +F  HRNLAY+F+P 
Sbjct:  512 GTKAYFTLDWTKGYWQLPLHADSQEFFSFMTPFGVYTPTRVLMGQTDAVAYCQSVVHQMFGELLFRELLAWLDDLLGSAKSVASLFDLLDQVLATCAEFGLKLSPKKCHFYMAEAEWCGKIISAAGVTHSPRRIQGLIDLALPTTAADLQQFVCATNWMRASITDNNKLIDPLRRLLDVAVKAAGSSKKKALARVALSLVGWSQDHAACFEDAKSALANVVPLSHPRSDLEVCVFTDASDKFWGAVATQIPSEDLSLPLEDQR--HKPLAFLSGTFTGASQCWPIVEKEAYAVVESCKRLDYLVVRPGGFRLFTDHRNLAYMFNPR 835          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0WTW1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTW1_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.920e-58
Identity = 120/326 (36.81%), Postives = 178/326 (54.60%), Query Frame = 1
Query:    1 GTSVFCTLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTRHAA-DNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHPE 969
            GT  + TLD  +GYWQ+PL   +QE F+ +T  GVYTPT V  G  +A +Y Q  +  +   LL      W +D+   A +   L   L  VL      G+  +  K   +  E   CGK    A V+H P R QG   +    TA +L QF+ A+NWMR S+P+   +++PLR +L+  +     ++  +   + ++   W+++ AA +E     ++  V L HPR++    +F DASD F  +  TQ+P E+LS   +D +  HEPLAFLSG F GA +RWP+V+KEAYA+V +  RL Y+     G  +F  HRNL Y+F+P 
Sbjct:  643 GTKAYFTLDWTKGYWQLPLHADSQEFFSFMTPFGVYTPTPVLMGQTDAVAYCQSVVHQMFGELLFRGLLAWLDDLLGSAKSVASLFNLLDQVLATCAEFGLKLSPKKCHFYLAEAEWCGKIISAAGVTHSPRRIQGLIDLALPTTAADLQQFVCATNWMRASIPDYNKLIDPLRRLLDVAVKAAGSSKKKSLARVALSLVGWSQDHAACFEDVKSALANVVQLSHPRSDMEVCVFTDASDKFWGAVATQIPSEDLSLPLEDQR--HEPLAFLSGTFTGASQRWPIVEKEAYAVVESCKRLDYLVVRPGGFRLFTDHRNLVYMFNPR 966          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0WYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYM7_9STRA)

HSP 1 Score: 212 bits (539), Expect = 4.360e-58
Identity = 122/326 (37.42%), Postives = 176/326 (53.99%), Query Frame = 1
Query:    1 GTSVFCTLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTRHAA-DNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHPE 969
            G  VF TLD ++GYWQ+PL P+ Q  ++ +T  GVYTPTR+  G  +A ++ Q  + ++   L+      W +D+  +A + ++L+  L  VL   Q   +     K   + +E + CGK      +SHDP R QG   M+   TA EL QFL A+NWMR S+P  A  V+PLR +L+         +  A   + +    WT E    +E     ++  VPL HP  +++  +F DAS     ++ TQVP  +L    D  K  HE LAFLSG+F GA  RWPV++KEAYA+V +  RL Y+     G  +F  HRNL YIF+P 
Sbjct:  184 GMEVFFTLDWLKGYWQLPLHPECQMWYSFMTPFGVYTPTRILMGQTDAVAFCQSVVNELFGDLMYQGVLGWLDDLLGYARSAEQLLVLLEKVLHICQEYRLKLHPKKCDFYLKEAKWCGKVISSEGISHDPSRVQGLCEMKAPTTAAELQQFLCATNWMRASIPLYAQRVDPLRRLLDVATKIAGSAKKTALAKVDLAVAGWTAEHDECFEEVKATLARMVPLAHPSEDKAICLFTDASADHWGAACTQVPKVDLELTVD--KQRHESLAFLSGSFTGASSRWPVIEKEAYAVVESCKRLEYLLLRQQGFRLFTDHRNLLYIFNPR 507          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A2P4Y0M2_9STRA (CRN2-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0M2_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.670e-56
Identity = 123/326 (37.73%), Postives = 175/326 (53.68%), Query Frame = 1
Query:    1 GTSVFCTLDLMQGYWQMPLDPQAQESFTMVTAKGVYTPTRVPQGVPNATSYFQGTMGDVLAGLLGNVCEVWFNDIGIWAGTWQELMRRLRVVLEWLQVRGIYAAAHKAKLFRQEMRCCGKRYLGATVSHDPERGQG*ASMRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTR--HAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFWD--GAHIFCGHRNLAYIFHP 966
            G+  + TLD  +GYWQ+PLD ++QE FT++T +G+ TPTRV  G  ++ ++ QG +  +   LLG     W +DI  +A +   LM+ L  VL   +  G+     K   + +E   CGK      V H P+R QG   +    TAG+L QF+ A NWMR S+P  + ++  L  +LE  +      +  H    + IT G W            + +   VPL H +A+    ++ DASD    S VTQVP  +L  G    K  H PLAFLSG+F GA RRW ++DKEA+AI++T  RL Y+     G HI+  HRNL YIF+P
Sbjct:  152 GSEDYFTLDWWRGYWQLPLDEESQEMFTIITPRGMVTPTRVLMGSSDSVAFCQGAVEQIFGPLLGQEILAWLDDILGFANSPPALMKVLEHVLALCEQYGLKLHPRKCCFYTREALWCGKLVSADGVRHSPDRIQGLVQLPPPRTAGDLQQFICAVNWMRSSIPNYSALMGDLAALLEVAVTKAKSRKKSHLHRILLITIG-WDSRHEEALRGVKDALLRIVPLAHAKADWEVTLYADASDEHWGSVVTQVPASDL--GLPLEKQRHHPLAFLSGSFTGASRRWAIIDKEAFAILATCKRLSYLLLRPRGFHIYTDHRNLQYIFNP 474          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE4.620e-9349.37Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE6.410e-9051.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE1.320e-6246.89CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6A4ZJ35_9STRA7.490e-6136.96Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]
A0A6G0WPP4_9STRA6.910e-5936.73Reverse transcriptase domain-containing protein n=... [more]
A0A6G0WP68_9STRA9.050e-5937.80Reverse transcriptase domain-containing protein n=... [more]
A0A6G0XQJ2_9STRA1.090e-5837.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WTW1_9STRA2.920e-5836.81Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WYM7_9STRA4.360e-5837.42Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A2P4Y0M2_9STRA1.670e-5637.73CRN2-like protein n=1 Tax=Phytophthora palmivora v... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10027contigH-paniculata_contig10027:21..989 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.6
Seed ortholog evalue2.5e-26
Seed eggNOG ortholog164328.Phyra85588
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size969
Cds size552
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928710.381419-CDS-H-paniculata_contig10027:20..5721622928710.381419-CDS-H-paniculata_contig10027:20..572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10027 21..572 -
1691480587.659109-CDS-H-paniculata_contig10027:20..5721691480587.659109-CDS-H-paniculata_contig10027:20..572Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10027 21..572 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928710.3975387-UTR-H-paniculata_contig10027:572..9891622928710.3975387-UTR-H-paniculata_contig10027:572..989Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10027 573..989 -
1691480587.6803133-UTR-H-paniculata_contig10027:572..9891691480587.6803133-UTR-H-paniculata_contig10027:572..989Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10027 573..989 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10027.34.1prot_H-paniculata_contig10027.34.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10027 21..572 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10027.34.1

>prot_H-paniculata_contig10027.34.1 ID=prot_H-paniculata_contig10027.34.1|Name=mRNA_H-paniculata_contig10027.34.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
MRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTRH
AADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASD
SFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEA
YAIVSTFLRLPYMFWDGAHIFCGHRNLAYIFHPE
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mRNA from alignment at H-paniculata_contig10027:21..989-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10027.34.1 ID=mRNA_H-paniculata_contig10027.34.1|Name=mRNA_H-paniculata_contig10027.34.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=969bp|location=Sequence derived from alignment at H-paniculata_contig10027:21..989- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGACTAGCGTGTTCTGCACGCTGGATCTGATGCAGGGCTACTGGCAGAT GCCCCTCGATCCTCAAGCGCAAGAGAGCTTCACGATGGTCACAGCAAAGG GGGTATACACGCCTACCAGAGTTCCTCAGGGAGTGCCAAATGCGACTAGT TACTTCCAGGGGACGATGGGAGACGTACTGGCAGGCTTGCTCGGAAACGT CTGTGAAGTGTGGTTTAATGACATAGGAATATGGGCCGGTACGTGGCAGG AACTGATGCGGAGACTGCGGGTGGTGCTAGAGTGGCTACAGGTACGCGGT ATTTACGCTGCGGCTCACAAGGCGAAGCTGTTTCGGCAAGAGATGCGCTG TTGCGGGAAACGTTACTTGGGGGCGACGGTCTCCCATGATCCGGAGCGAG GACAGGGTTAGGCCTCCATGCGCCGGACTAACACGGCAGGGGAGCTGATA CAGTTTCTCCAGGCGTCAAATTGGATGAGAATGTCGGTGCCAGAGCTGGC TGTGGTGGTGGAGCCTCTGCGTGAGATGCTGGAGACATTTCTGAACCACA CGGACCGGACGCGGCATGCGGCGGACAATATAACCATAACAAGAGGAGAC TGGACAGAGGAACGCGCGGCGACGTGGGAGACGGCGACCGAGCGCGTCTC CGAGGCCGTGCCGCTATACCATCCGCGGGCGAATCGTAGTGAGCTGATCT TTCCTGACGCAAGCGATAGTTTTGGGAGAAGCAGCGTGACGCAGGTACCA CCGGAGGAACTGAGCGAAGGCGGCGACGACGCGAAAATGAGCCATGAGCC GCTAGCATTTTTGAGTGGAGCATTCAAGGGGGCCCAGCGGAGGTGGCCGG TGGTGGATAAGGAGGCGTATGCCATCGTGTCAACGTTCTTGAGACTACCG TACATGTTCTGGGACGGTGCGCATATATTCTGCGGCCATCGGAATTTGGC ATACATTTTTCATCCAGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig10027:21..989-

>mRNA_H-paniculata_contig10027.34.1 ID=mRNA_H-paniculata_contig10027.34.1|Name=mRNA_H-paniculata_contig10027.34.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig10027:21..989- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGCCGGACTAACACGGCAGGGGAGCTGATACAGTTTCTCCAGGCGTC
AAATTGGATGAGAATGTCGGTGCCAGAGCTGGCTGTGGTGGTGGAGCCTC
TGCGTGAGATGCTGGAGACATTTCTGAACCACACGGACCGGACGCGGCAT
GCGGCGGACAATATAACCATAACAAGAGGAGACTGGACAGAGGAACGCGC
GGCGACGTGGGAGACGGCGACCGAGCGCGTCTCCGAGGCCGTGCCGCTAT
ACCATCCGCGGGCGAATCGTAGTGAGCTGATCTTTCCTGACGCAAGCGAT
AGTTTTGGGAGAAGCAGCGTGACGCAGGTACCACCGGAGGAACTGAGCGA
AGGCGGCGACGACGCGAAAATGAGCCATGAGCCGCTAGCATTTTTGAGTG
GAGCATTCAAGGGGGCCCAGCGGAGGTGGCCGGTGGTGGATAAGGAGGCG
TATGCCATCGTGTCAACGTTCTTGAGACTACCGTACATGTTCTGGGACGG
TGCGCATATATTCTGCGGCCATCGGAATTTGGCATACATTTTTCATCCAG
AGATGCGCCGGACTAACACGGCAGGGGAGCTGATACAGTTTCTCCAGGCG
TCAAATTGGATGAGAATGTCGGTGCCAGAGCTGGCTGTGGTGGTGGAGCC
TCTGCGTGAGATGCTGGAGACATTTCTGAACCACACGGACCGGACGCGGC
ATGCGGCGGACAATATAACCATAACAAGAGGAGACTGGACAGAGGAACGC
GCGGCGACGTGGGAGACGGCGACCGAGCGCGTCTCCGAGGCCGTGCCGCT
ATACCATCCGCGGGCGAATCGTAGTGAGCTGATCTTTCCTGACGCAAGCG
ATAGTTTTGGGAGAAGCAGCGTGACGCAGGTACCACCGGAGGAACTGAGC
GAAGGCGGCGACGACGCGAAAATGAGCCATGAGCCGCTAGCATTTTTGAG
TGGAGCATTCAAGGGGGCCCAGCGGAGGTGGCCGGTGGTGGATAAGGAGG
CGTATGCCATCGTGTCAACGTTCTTGAGACTACCGTACATGTTCTGGGAC
GGTGCGCATATATTCTGCGGCCATCGGAATTTGGCATACATTTTTCATCC
AGAG
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