prot_H-paniculata_contig1577.3347.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1577.3347.1
Unique Nameprot_H-paniculata_contig1577.3347.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length255
Homology
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BLAST of mRNA_H-paniculata_contig1577.3347.1 vs. uniprot
Match: D8LHU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU6_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.070e-38
Identity = 92/219 (42.01%), Postives = 114/219 (52.05%), Query Frame = 0 
Query:    8 KIQVRVEPAFQSTEPFGSGTTYIEAPDPAYAPAESRWQRKDTSFQLLVYYD---PPQRRRENLAGLAEQGQGATSRYDADASARGAANELPGTDRAAFSTTSTEHSRESQGSLLLYRKVASAGMHRAPIPLEALEMDSTIHLWLICSGVCGMDVVDIRMKPSSLSENFSTAADLRTIWASAGDSSTQQQVKAGE-GAGEHDSTNDPSARELWRDWEQSE 222
            ++QVRVEPAFQ+T+PF  G  YIE PD AYAP  + W+R DT+FQLLVYYD   PP                                                    S   L+L+RK+   GMH A +P+EA+E D TIHLWLICSGVCGMDV D+R+KPSSL   F++ ADLR IW+     S  Q  +  E GA   D +   S R  W DWE ++
Sbjct:  944 ELQVRVEPAFQTTDPFSDG--YIEPPDDAYAPPPTGWRRNDTNFQLLVYYDGQEPPL---------------------------------------------------SSSPLMLFRKINMEGMHSATLPVEAIEKDVTIHLWLICSGVCGMDVADVRIKPSSLDSRFASVADLRAIWSQNARRSANQDAQDEEDGADPVDESAPASDRAGWLDWETND 1109
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BLAST of mRNA_H-paniculata_contig1577.3347.1 vs. uniprot
Match: A0A6H5KGS9_9PHAE (SEC63 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS9_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 4.310e-28
Identity = 70/157 (44.59%), Postives = 91/157 (57.96%), Query Frame = 0 
Query:    8 KIQVRVEPAFQSTEPFGSGTTYIEAPDPAYAPAESRWQRKDTSFQLLVYYDPPQRRRENLAGLAEQGQGATSRYDADASARGAANELPGT--DRAAFSTTSTEHSRESQGSLLLYRKVASAGMHRAPIPLEALEMDSTIHLWLICSGVCGMDVVDIR 162
            ++QVRVEPAFQ+T+PF  G  YIE PD AYAP  + W+R DT+FQL+VY+D      + L  +                 R    E+  T  D     T   + S  S   L+L+RK+   G+H A +P+EA+E D TIHLWLICSGVCGMDV D+R
Sbjct:  200 ELQVRVEPAFQTTDPFSDG--YIEPPDDAYAPPPTGWRRNDTNFQLVVYHDG-----QVLFSIVY--------------CRWYVGEILLTRPDIIIRMTRQGQESPSSSSPLMLFRKINREGIHSATLPVEAIEKDVTIHLWLICSGVCGMDVADVR 335
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1577.3347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHU6_ECTSI1.070e-3842.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGS9_9PHAE4.310e-2844.59SEC63 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1577contigH-paniculata_contig1577:15595..24099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1577.3347.1mRNA_H-paniculata_contig1577.3347.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1577 15595..24099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1577.3347.1 ID=prot_H-paniculata_contig1577.3347.1|Name=mRNA_H-paniculata_contig1577.3347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=255bp
MLETAKIKIQVRVEPAFQSTEPFGSGTTYIEAPDPAYAPAESRWQRKDTS
FQLLVYYDPPQRRRENLAGLAEQGQGATSRYDADASARGAANELPGTDRA
AFSTTSTEHSRESQGSLLLYRKVASAGMHRAPIPLEALEMDSTIHLWLIC
SGVCGMDVVDIRMKPSSLSENFSTAADLRTIWASAGDSSTQQQVKAGEGA
GEHDSTNDPSARELWRDWEQSEPPTSSSPPPTTTSTTTTGENIKQTPNKK
DGGGG
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