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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 1035 |
| Cds size | 714 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15724.3322.1 >prot_H-paniculata_contig15724.3322.1 ID=prot_H-paniculata_contig15724.3322.1|Name=mRNA_H-paniculata_contig15724.3322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
MVREELVCLTAVVAFVDNVLTEIPSLTRGTNIRIEHVLCRLLHSRKPLDP
TYRSKGIHHFSCALSNPTWRWPRENHQENHDDFHENLRKIPLEWRIPLLD
IVRSLIADGEDTSEDSFRVGDRGEGRLGLGNATKHQRAQGVQKNALLQIL
QSVMLETLSSNTEAARGPSDSTGSSIDKEDAREAAAAILTMGSLRLEDPG
KLEVAKVVLAMESRLLENTLKMDGCRSGCQLWQISSV* back to topmRNA from alignment at H-paniculata_contig15724:1918..4530- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig15724.3322.1 ID=mRNA_H-paniculata_contig15724.3322.1|Name=mRNA_H-paniculata_contig15724.3322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2613bp|location=Sequence derived from alignment at H-paniculata_contig15724:1918..4530- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATAATTCAAATTTACGTTTTCGTGTGTTTTTTCTGCCCTCTAGGAGATG
GCACAACTTCCTGGTTTTTCAACATTTTCGACAACAATATGAGAAGCACT
TTTTTGTGTGCACTCATGGCACTGCTAACAATATCTCCATTAAAAAATTT
ACCGTAATTCTCGAGATATGGTGAGGGAGGAATTAGTATGTCTCACCGCA
GTAGTTGCCTTCGTCGATAATGTTTTGACCGAAATTCCGTCATTGACTCG
TGGGACGAACATTCGTATTGAACACGTTCTCTGTCGTTTATTACACAGCA
GAAAGCCGCTTGACCCTACATATCGCTCCAAGGGCATACACCACTTCTCA
TGCGCCCTTTCCAATCCAACTTGGCGTTGGCCTCGGGAAAACCACCAGGA
GAATCACGACGACTTCCACGAGAATCTGCGAAAAATACCCCTCGAATGGC
GCATACCATTGTTGGACATCGTGCGGTCGCTTATTGCGGACGGCGAGGAT
ACGTCGGAGGATAGCTTTCGTGTCGGTGACCGTGGAGAAGGCAGATTGGG
GTTAGGAAATGCAACGAAGCATCAGGTGTGTGATAACAGGGTCTTGGGGT
GAACCACAGAAGAAGTGGCGGCAGTGTTATGGTGCGGAAATGGAAAGCAA
GGTAAGGTGTGATCGTACTTATGTCATGGCTTGTGTGTAAGGCTGCATGA
AAACATGAGACTGATGGTGGAGCCCAATGGATTGTCACGTCGAGCGTTGT
GCGTTAAGTACGGTATCGACTTGGTCTGAAACGCTTGCGTCGGATTCGTG
CACATTCAAAAATCCGGATGTGTAGCCGATGTTAAACCTAGTTTTCCGTA
CTATCACCTTCGCTTGTTTGAACCAGCGCTTTGAACAGGATATTCGTGCT
ATTCTTTGTTCGACAGTTTAGCACGTGTGACCCTGTAGAGTCCGTGCGGG
GCTGTACAAGACTGGTCGGCAGAGCCCGTACAATACACAACGGTATTGCG
TACGACAGTCCGTAGTCCTGCGAACTGTGTTTTGCGGTACCAGTTCGTTG
CGTTCTTATTCCATGGATTAGTGTAGGATCGCTTTCTTCATACTATCTTG
GCTGTTGGAAATAGATCGGCACCGTTTTTTTTTTAAATCATCACTTCAAG
TGCAACGGGTGCGAAACACATAAGCCCTGGTTTGTTGTCACCCAGGGCGG
CGCAATACAGCAGGGAAAGCTGATGTATGTATATATATATATATATATAT
CTCTTTCAGCTTTAGCTAATCAATAGTAGAACCTCCATCAGCTGGAGAAA
GGCGTCAAGGCTAGTCACCTAGGAAGGGAGTCACAGTTGGAGTAGCGGGC
CATTTTTACCAAGAACACGGTCTCGACAAGCGATTGCGGACGGTTCGTGC
CGCCCGTACCACCTCCATATATAGTTTGTCCGTTCGCCACCACTTGCACC
CTGTATACCATCTGCAACAAAGATGGCAGTGGTGGTGGTGAGGGCGGAAT
GGAGGCGCACGTTTGGGCTGGACTTGTTGGCGAGGAAACAGGAGGCAACA
ATTCGCGGTAGGCCTGTCGCTATATTCGCTGTTGAAGGACTTGGGTTGAA
AAACACGGCGACACACATGAATATCAGGGGCCATCCAGTTGGAATCTTTC
GATGCTGGACGTGTATAAGACCCACACGATGGGAAATTCTCACTGCAGCG
GAATGGCGAAGCGTCAGGCAACGGATAAAGAATGTAACACGAGTCATTTT
TCATGTGATGGAGTTAGACTTTTCGGTCGATCACATTTGGAGTGTGGCTC
CATGCATGCCCGGAATATTGAGTGACAAATAGTTTGAGCTAACCATGCCA
TCGTCAATTTAGTTCCGAACTTATCTGGTTCTGTGCTGAAGAAGACCCCA
GTGCAAGTGCCACACCGCAGGTTGGTTTGTTGTGGCAGTTAAAATCACCA
CTAGATTCCCGGGCTGGATCTGTCTTCTCTCTTCTTGTTGATGCAAGATA
TCTTGTATTGAGAGTACCCAGCTACGCGTAATTTATTTTTGCAAGTAGAA
AATTCTTGCTGTCAGTGTAGCTCCGCCCTCCACCGACGAACGAGAAGAAC
TCACAACAGCGAGCCCTTTGCCTTGTCATCCTTTTGTTTTCTTCTGGTCG
AAGCGCGCGCAAGGTGTTCAGAAAAACGCGTTGCTCCAGATACTTCAGTC
GGTGATGCTGGAGACACTCTCAAGCAACACGGAAGCGGCTCGGGGACCCT
CGGACAGTACTGGAAGTAGCATAGACAAAGAAGACGCAAGGGAGGCTGCT
GCGGCGATCCTGACAATGGGTTCCTTGCGCCTGGAAGATCCCGGCAAGCT
AGAGGTGGCGAAGGTCGTCCTGGCAATGGAGTCCCGGTTGCTGGAAAATA
CCCTCAAAATGGACGGGTGCAGGAGTGGATGTCAACTGTGGCAAATATCC
AGCGTATAAAAGGCTATTTCAGCGGCGGATTGTAATTAGAGGTTTCCGAG
GTGCTTGGTTTTTGCATCCTTCGGCTAGATGACAGGAACATTTTCAACAT
GGTAAGCCTATATATATTGCTACATAAGTAGAGGTTTTGAGGTCCAAATT
GCACTTAGGGGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig15724:1918..4530- >mRNA_H-paniculata_contig15724.3322.1 ID=mRNA_H-paniculata_contig15724.3322.1|Name=mRNA_H-paniculata_contig15724.3322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at H-paniculata_contig15724:1918..4530- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGAGGGAGGAATTAGTATGTCTCACCGCAGTAGTTGCCTTCGTCGA
TAATGTTTTGACCGAAATTCCGTCATTGACTCGTGGGACGAACATTCGTA
TTGAACACGTTCTCTGTCGTTTATTACACAGCAGAAAGCCGCTTGACCCT
ACATATCGCTCCAAGGGCATACACCACTTCTCATGCGCCCTTTCCAATCC
AACTTGGCGTTGGCCTCGGGAAAACCACCAGGAGAATCACGACGACTTCC
ACGAGAATCTGCGAAAAATACCCCTCGAATGGCGCATACCATTGTTGGAC
ATCGTGCGGTCGCTTATTGCGGACGGCGAGGATACGTCGGAGGATAGCTT
TCGTGTCGGTGACCGTGGAGAAGGCAGATTGGGGTTAGGAAATGCAACGA
AGCATCAGATGGTGAGGGAGGAATTAGTATGTCTCACCGCAGTAGTTGCC
TTCGTCGATAATGTTTTGACCGAAATTCCGTCATTGACTCGTGGGACGAA
CATTCGTATTGAACACGTTCTCTGTCGTTTATTACACAGCAGAAAGCCGC
TTGACCCTACATATCGCTCCAAGGGCATACACCACTTCTCATGCGCCCTT
TCCAATCCAACTTGGCGTTGGCCTCGGGAAAACCACCAGGAGAATCACGA
CGACTTCCACGAGAATCTGCGAAAAATACCCCTCGAATGGCGCATACCAT
TGTTGGACATCGTGCGGTCGCTTATTGCGGACGGCGAGGATACGTCGGAG
GATAGCTTTCGTGTCGGTGACCGTGGAGAAGGCAGATTGGGGTTAGGAAA
TGCAACGAAGCATCAGCGCGCGCAAGGTGTTCAGAAAAACGCGTTGCTCC
AGATACTTCAGTCGGTGATGCTGGAGACACTCTCAAGCAACACGGAAGCG
GCTCGGGGACCCTCGGACAGTACTGGAAGTAGCATAGACAAAGAAGACGC
AAGGGAGGCTGCTGCGGCGATCCTGACAATGGGTTCCTTGCGCCTGGAAG
ATCCCGGCAAGCTAGAGGTGGCGAAGGTCGTCCTGGCAATGGAGTCCCGG
TTGCTGGAAAATACCCTCAAAATGGACGGGTGCAGGAGTGGATGTCAACT
GTGGCAAATATCCAGCGTATAACGCGCGCAAGGTGTTCAGAAAAACGCGT
TGCTCCAGATACTTCAGTCGGTGATGCTGGAGACACTCTCAAGCAACACG
GAAGCGGCTCGGGGACCCTCGGACAGTACTGGAAGTAGCATAGACAAAGA
AGACGCAAGGGAGGCTGCTGCGGCGATCCTGACAATGGGTTCCTTGCGCC
TGGAAGATCCCGGCAAGCTAGAGGTGGCGAAGGTCGTCCTGGCAATGGAG
TCCCGGTTGCTGGAAAATACCCTCAAAATGGACGGGTGCAGGAGTGGATG
TCAACTGTGGCAAATATCCAGCGTATAA back to top
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