prot_H-paniculata_contig15646.3279.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15646.3279.1
Unique Nameprot_H-paniculata_contig15646.3279.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length125
Homology
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 99.0 bits (245), Expect = 1.330e-21
Identity = 53/126 (42.06%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGRRE-KVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGLKQSGR WNNTLD+ L  +G  RS  ++CL+     +++ +  +AVYV  L+I    E ++   K ++S  F   D GSLS  LG+E++RD   G +++ Q +YIR +LK  G   CR V TP
Sbjct:  967 IYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQ--QQQGSSYIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATP 1090          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A4Q2D651_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2D651_9AGAR)

HSP 1 Score: 95.9 bits (237), Expect = 1.610e-20
Identity = 55/126 (43.65%), Postives = 75/126 (59.52%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGLKQSGR WN TLD  L+ +GL R   ++CL+   +D E   L+V  YV  L++A   R  ++K K  +S  F+ KDLG    +LG+ + RDR NG I +SQ +YI  VL+  G   C   PTP
Sbjct: 1143 LYGLKQSGRTWNKTLDQSLLSMGLVRLDAETCLYVYKEDGEVCFLVV--YVDDLLLAATSRPFMNKVKAMLSSRFKMKDLGEAKFILGMAIHRDRRNGEIRLSQRNYIANVLERTGMSHCSPAPTP 1266          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM)

HSP 1 Score: 92.0 bits (227), Expect = 6.160e-20
Identity = 45/126 (35.71%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGRREKV-DKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGLKQS R WN T+DDF++ +G  +  +D C++   D ++   + VA+YV  LV+A   +++ +  KH +S  F   DLG L   LG+E++ DR +G +T+ Q  +++ +L   G  + + V TP
Sbjct:  134 LYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRDGQDM--IFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTP 257          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: H3H9Y1_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9Y1_PHYRM)

HSP 1 Score: 93.6 bits (231), Expect = 9.240e-20
Identity = 46/126 (36.51%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGRREKV-DKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGLKQS R WN T+DDF++ +G  +  +D C++   D ++   + VA+YV  LV+A   +++ D  KH +S  F   DLG L   LG+E++ DR +G +T+ Q  +++ +L   G  + + V TP
Sbjct:  432 LYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRDGQDM--IFVALYVDDLVLASSNDELLDSTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTP 555          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL)

HSP 1 Score: 92.8 bits (229), Expect = 1.540e-19
Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVI-AGRREKVDKFKHKV-SVFRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGL QSGR WN   D  +  IGL ++  D+C+++   D E   + V V+V  L+I A  +++ ++ K ++ ++F  KDLG   +++GIEV RDR  GT+T+SQ  YI  +L   GF +  GV TP
Sbjct:  123 LYGLHQSGREWNREFDQKVQTIGLTKTAADNCVYYRERDGER--VWVTVWVDDLIILATSKDEGERVKKELDTLFEMKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTP 246          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A2J7RGU0_9NEOP (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RGU0_9NEOP)

HSP 1 Score: 92.0 bits (227), Expect = 1.820e-19
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGRREKVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNG-TITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGL QSG++WN+T+    V  GL + T D C+FF+  DR    ++VA+YV  ++I G R+ V+  K ++S     KDLG +S  LGI V  DRPNG  I I Q +Y+   LK  G  +C+G  TP
Sbjct:  129 IYGLHQSGKDWNDTITFIFVSFGLKQCTKDPCVFFN--DR----IIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLGPVSNFLGINV--DRPNGYVIKIHQENYVNETLKTFGMLDCKGCVTP 246          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.860e-19
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLF-FSHDDREETNLLVAVYVGGLVIAGRREK-VDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGL QS  NW +T+D FLV IG     +D+C++ + HDD     + + +YV  L++AG   + +   K K++  F+  D+G +  VLG+E++RDR  GT+TISQ +Y + +L+  G  EC+   TP
Sbjct:  608 LYGLAQSPSNWFHTIDPFLVEIGFVPLKSDTCVYLYDHDD---VQVYLTLYVDDLLLAGNNSRAISMIKKKLTQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTP 731          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A8H6XNZ2_9AGAR (Uncharacterized protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6XNZ2_9AGAR)

HSP 1 Score: 92.4 bits (228), Expect = 2.620e-19
Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVS-VFRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGLKQSGR WN   D  L  I L ++  D C+++   D E T   V V+V  L+I    R + ++ K ++  +F TKDLG   +++GIE+RRDR +GTIT+SQ+ Y+  +L   G  + + + TP
Sbjct: 1043 IYGLKQSGREWNREFDRKLTSIQLVKTAVDHCVYYREHDGERT--WVTVWVDDLLILSTSRHEAERTKAEIEGLFDTKDLGEPRKIIGIEIRRDRGSGTITLSQLHYVETLLAKYGLTDAKPLATP 1166          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A2J7PFT8_9NEOP (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PFT8_9NEOP)

HSP 1 Score: 92.0 bits (227), Expect = 3.520e-19
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGRREKVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNG-TITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGL QSG++WN+T+    V  GL + T D C+FF+  DR    ++VA+YV  ++I G R+ V+  K ++S     KDLG +S  LGI V  DRPNG  I I Q +Y+   LK  G  +C+G  TP
Sbjct:  889 IYGLHQSGKDWNDTITFIFVSFGLKQCTKDPCVFFN--DR----IIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLGPVSNFLGINV--DRPNGYVIKIHQENYVNETLKTFGMLDCKGCVTP 1006          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A2J7Q727_9NEOP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q727_9NEOP)

HSP 1 Score: 92.0 bits (227), Expect = 3.570e-19
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGRREKVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNG-TITISQVSYIRGVLKINGFDECRGVPTP 124
            +YGL QSG++WN+T+    V  GL + T D C+FF+  DR    ++VA+YV  ++I G R+ V+  K ++S     KDLG +S  LGI V  DRPNG  I I Q +Y+   LK  G  +C+G  TP
Sbjct:  992 IYGLHQSGKDWNDTITFIFVSFGLKQCTKDPCVFFN--DR----IIVAIYVDDMIICGTRKDVNDCKRQLSQRLNVKDLGPVSNFLGINV--DRPNGYVIKIHQENYVNETLKTFGMLDCKGCVTP 1109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W8BWJ0_CERCA1.330e-2142.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Q2D651_9AGAR1.610e-2043.65Integrase catalytic domain-containing protein (Fra... [more]
H3H934_PHYRM6.160e-2035.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H9Y1_PHYRM9.240e-2036.51CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A146H3U8_MYCCL1.540e-1939.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2J7RGU0_9NEOP1.820e-1942.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KL37_9PHAE1.860e-1938.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H6XNZ2_9AGAR2.620e-1939.68Uncharacterized protein n=1 Tax=Mycena sanguinolen... [more]
A0A2J7PFT8_9NEOP3.520e-1942.86Uncharacterized protein n=1 Tax=Cryptotermes secun... [more]
A0A2J7Q727_9NEOP3.570e-1942.86Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..124
e-value: 2.3E-22
score: 79.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15646contigH-paniculata_contig15646:5005..5473 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15646.3279.1mRNA_H-paniculata_contig15646.3279.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15646 4347..5861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15646.3279.1 ID=prot_H-paniculata_contig15646.3279.1|Name=mRNA_H-paniculata_contig15646.3279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVY
VGGLVIAGRREKVDKFKHKVSVFRTKDLGSLSRVLGIEVRRDRPNGTITI
SQVSYIRGVLKINGFDECRGVPTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2