prot_H-paniculata_contig155.3215.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig155.3215.1
Unique Nameprot_H-paniculata_contig155.3215.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length197
Homology
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BLAST of mRNA_H-paniculata_contig155.3215.1 vs. uniprot
Match: A0A6H5L022_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L022_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 5.060e-17
Identity = 62/154 (40.26%), Postives = 94/154 (61.04%), Query Frame = 0 
Query:   46 YQAGPRQSQHRSPVRSGLRCRPSLANCTLGIRCGGAGQRRTE--TRVWM---KGRSPSQ-LTEDELSQMARAREETNQKLEKFMLLKEALKAAKIEEERELNSAKVKERVRLEKEKADEAKKYIPQRLQEIEREEALLRSRVTDFNAKIKDTDV 193
            + A  + +  R+P RS        A    G R  G  +  T   TR+ M   +GR+P   L+E++L+ MA++REE NQK+E F+  + A + A+ E E+     KV  R++ EKE+A+ +K YIPQRL+EIERE+A+L+ R++ FN KIKD D+
Sbjct:   29 FPASSQSALARAPTRS--------ATVPAGSRSRGQSRDATTVLTRLGMMFGRGRNPPPTLSEEDLATMAKSREEANQKIENFLEKRRADRKARKEAEQAXXREKVANRMKAEKEEAEHSKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDI 174
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BLAST of mRNA_H-paniculata_contig155.3215.1 vs. uniprot
Match: D7FRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI6_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.660e-12
Identity = 40/89 (44.94%), Postives = 63/89 (70.79%), Query Frame = 0 
Query:  108 MARAREETNQKLEKFMLLKEALKAAKIEEERELNSAKVKERVRLEKEKADEAKKYIPQRLQEIEREEALLRSRVTDFNAKIKDTDVKQM 196
            MA++REE N K++ F+  + A + A+ E E+     KV  R++ +KE+A+  K YIPQRL+EIERE+A+L+ R++ FN KIKD D++ +
Sbjct:    1 MAKSREEANHKIDNFLEKRRAEREARKEAEQAEQREKVANRMKAKKEEAEHNKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDIEDL 89
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig155.3215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L022_9PHAE5.060e-1740.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRI6_ECTSI1.660e-1244.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..187
NoneNo IPR availableCOILSCoilCoilcoord: 112..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.579

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig155contigH-paniculata_contig155:42768..45736 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig155.3215.1mRNA_H-paniculata_contig155.3215.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig155 42654..46996 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig155.3215.1 ID=prot_H-paniculata_contig155.3215.1|Name=mRNA_H-paniculata_contig155.3215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
MKFIGVITVSVCIWMCSRCSEAFMLPPTTRSSSISSHRSTVMSGHYQAGP
RQSQHRSPVRSGLRCRPSLANCTLGIRCGGAGQRRTETRVWMKGRSPSQL
TEDELSQMARAREETNQKLEKFMLLKEALKAAKIEEERELNSAKVKERVR
LEKEKADEAKKYIPQRLQEIEREEALLRSRVTDFNAKIKDTDVKQM*
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