mRNA_H-paniculata_contig1544.3186.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1544.3186.1
Unique NamemRNA_H-paniculata_contig1544.3186.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1544.3186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1544contigH-paniculata_contig1544:10714..20660 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons9
Model size2518
Cds size1407
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929235.8593514-UTR-H-paniculata_contig1544:10713..117131622929235.8593514-UTR-H-paniculata_contig1544:10713..11713Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1544 10714..11713 -
1691480781.7188716-UTR-H-paniculata_contig1544:10713..117131691480781.7188716-UTR-H-paniculata_contig1544:10713..11713Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1544 10714..11713 -
1622929236.0012665-UTR-H-paniculata_contig1544:20549..206601622929236.0012665-UTR-H-paniculata_contig1544:20549..20660Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1544 20550..20660 -
1691480781.8133826-UTR-H-paniculata_contig1544:20549..206601691480781.8133826-UTR-H-paniculata_contig1544:20549..20660Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1544 20550..20660 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929235.8739219-CDS-H-paniculata_contig1544:11713..118221622929235.8739219-CDS-H-paniculata_contig1544:11713..11822Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 11714..11822 -
1691480781.7297273-CDS-H-paniculata_contig1544:11713..118221691480781.7297273-CDS-H-paniculata_contig1544:11713..11822Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 11714..11822 -
1622929235.8848355-CDS-H-paniculata_contig1544:14954..154031622929235.8848355-CDS-H-paniculata_contig1544:14954..15403Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 14955..15403 -
1691480781.7379298-CDS-H-paniculata_contig1544:14954..154031691480781.7379298-CDS-H-paniculata_contig1544:14954..15403Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 14955..15403 -
1622929235.897008-CDS-H-paniculata_contig1544:16093..163911622929235.897008-CDS-H-paniculata_contig1544:16093..16391Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 16094..16391 -
1691480781.7479877-CDS-H-paniculata_contig1544:16093..163911691480781.7479877-CDS-H-paniculata_contig1544:16093..16391Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 16094..16391 -
1622929235.9116256-CDS-H-paniculata_contig1544:17506..176001622929235.9116256-CDS-H-paniculata_contig1544:17506..17600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 17507..17600 -
1691480781.7561023-CDS-H-paniculata_contig1544:17506..176001691480781.7561023-CDS-H-paniculata_contig1544:17506..17600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 17507..17600 -
1622929235.9264479-CDS-H-paniculata_contig1544:18738..188241622929235.9264479-CDS-H-paniculata_contig1544:18738..18824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 18739..18824 -
1691480781.7678494-CDS-H-paniculata_contig1544:18738..188241691480781.7678494-CDS-H-paniculata_contig1544:18738..18824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 18739..18824 -
1622929235.9404905-CDS-H-paniculata_contig1544:19030..191491622929235.9404905-CDS-H-paniculata_contig1544:19030..19149Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 19031..19149 -
1691480781.780937-CDS-H-paniculata_contig1544:19030..191491691480781.780937-CDS-H-paniculata_contig1544:19030..19149Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 19031..19149 -
1622929235.9581118-CDS-H-paniculata_contig1544:19546..196421622929235.9581118-CDS-H-paniculata_contig1544:19546..19642Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 19547..19642 -
1691480781.7881548-CDS-H-paniculata_contig1544:19546..196421691480781.7881548-CDS-H-paniculata_contig1544:19546..19642Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 19547..19642 -
1622929235.9742942-CDS-H-paniculata_contig1544:20129..202281622929235.9742942-CDS-H-paniculata_contig1544:20129..20228Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 20130..20228 -
1691480781.7980168-CDS-H-paniculata_contig1544:20129..202281691480781.7980168-CDS-H-paniculata_contig1544:20129..20228Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 20130..20228 -
1622929235.9896133-CDS-H-paniculata_contig1544:20492..205491622929235.9896133-CDS-H-paniculata_contig1544:20492..20549Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 20493..20549 -
1691480781.8056142-CDS-H-paniculata_contig1544:20492..205491691480781.8056142-CDS-H-paniculata_contig1544:20492..20549Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1544 20493..20549 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1544.3186.1prot_H-paniculata_contig1544.3186.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1544 11714..20549 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1544.3186.1

>prot_H-paniculata_contig1544.3186.1 ID=prot_H-paniculata_contig1544.3186.1|Name=mRNA_H-paniculata_contig1544.3186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=469bp
MVAVGHRIKNPATSLPHLQVPMSTRRRLAGRNSQAVRSRSGLQPYHQAIL
QQGPRIADVQRENQKLRTLNEGLHNQNADLARELNEVKSRLQIHRQRQRE
MERNLYKRVNNAQTLRGLAGARRGWVQNDCIGDSGSGVKNGLSGEAGGAL
PSASKASPESESWSVRPIVRIANTEQAASKRRQRRSSLLPRALLNVSAGD
GRKEMKAVLSPREEKRNASLSPPDVPISSGASKNRGLDSPAITVVPATMV
VGVSDESSPGGAIDHPSEAEMFSTEPFNDALDQSASDEQDAPKTPDASSA
RKSSPCRPTPRLPSPSSSAMPWGIPVPLSTSPPGLLHHTPPYSTLNDTLA
SEDVGGSTVIPNATARVQLSPVSTEPSPTAREASVAAAAAATTATARGGG
TGESRRRPGERPRRQVAQPVSYQEPLLNVKMRKGHVMFPKAKGQGQRGPN
KDKENDGRERGERGDKKP*
back to top

mRNA from alignment at H-paniculata_contig1544:10714..20660-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1544.3186.1 ID=mRNA_H-paniculata_contig1544.3186.1|Name=mRNA_H-paniculata_contig1544.3186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9947bp|location=Sequence derived from alignment at H-paniculata_contig1544:10714..20660- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTATTGACCTTCTGCACCGGCAAGACAGTCAGACACACACCGTCATCAAC TCGGTTACTGCATTTGAGAGGGAGTCGGACTGTCTGTAACTACTGTCAGC AGTCACAACGGATGGTAGCAGTCGGACACAGAATCAAAAACCCAGCAACT TCACTACCTCATCTCCAGGCGGGTTCCCAGCGCAGTAATGACCATGAAGG GAGGTCACTTGTGGCAGAAGTAGTGTGAGTTGGCCTGAATTGGCCGGCCA GCATGGGCTCTGGTGTCGCGTGTGCTCGTTTCTACTGGACTACCAACTTT CGTTGCGTATTTGCTGTAAGGGATGTATTTATACACCTTATATGTTTCTC CATGCTGTCTCTGATCACACGAATGTTGCACCGTTGTTGTTGTGGTTCTG GATGTATGAAAAACACCATGCTCGTCCCACAGGTGCCAATGAGCACACGC CGACGACTGGCAGGGCGCAACTCCCAAGCAGTCCGCAGTAGGAGCGGACT TCAACCATACCACCAGGCTATACTTCAACAGGTAGTGTCTTGATCAAGGC GGGACACAAAATGTCCCGGGCTCATCATTTTCTGTAATCGTAACGATCAG AGTTGACGTGATTACACTTCGTTTTGACAGTTGCACCTACCCCGTCCCTT TTTCCGTGATTGCGGCGCGATCACTGTCGTCCACGGAAACCGAGAACAGC GGAAACAAACATAGAGCTCAGAATGTGAAAACACCGGAGTATAATAGTAC TTGATAGGCAGACCGCCACATGCTGTTTACACACATTCATGTAGAAGCCG TCAGCTGGTTGTTGTGATACGTGGACGTCTTCAAAATAAAATCATTTCAC TGGAAGGTTGCGACCGAAGTCAATACAACATGATGATCTGCTTCCTCAAC GATCCCTTCAAGTATTGCAAGTAACTATCTATGTACATCGTATAACTCTA GTGCCCCAGCACCTACTCTGACTCGCTACGATGATGTGCCGACGGGCAAT CCTTACTTTTCCGAACAGGGGCCACGAATCGCGGATGTTCAGCGCGAGAA CCAAAAGCTACGCACTCTCAATGAAGGACTGCACAACCAAAACGCCGATC TTGCTAGAGAACTGGCAAGTATCCTGATTTCTTGCTGTGAACACTTTATA GAGCAAGCCCGAAAAAGCCTCTCGTGTTCTTGATAGACGACAAATAACAT TTCATGGAGTGATTTGATACGATTTCCCCAGGGTTTTTGTTCTTTCGTTG ATGCTCCTGCCACTTGTACGTTGCCGTCGTCGTTTATTCCCTCAAGCGAA AGATTTCTGGGGAGTATGTATGGTCATACATAAAGAAGGGCAGGCGAGGT GACTGTGAAATTAGTGTGTGCTGTTTTTTCTGTCATAATCACCCACCGAT TGTAAAGTAATGCCTCGGGGGGAAACGAAATCTACGTTCCCCCTGCTATC CGGGTATTTGGATTTCCCGGGTCTAATACCATACCCCACCTCAATTGTTG AATGACACCAGAACGAGGTCAAGTCCAGGTTGCAAATTCATCGGCAGCGA CAACGCGAAATGGAGCGAAATCTATATAAACGCGTCAATAACGCACAGAC TTTGAGAGGACTCGCCGGGGCAAGACGCGGGTAAGGAGTTTCACGGAAGA GGAGGGGTGTGCATTTCCTAACGGGCACTGCCGCCGTCATCATATTCAAA ATGTCATTCCTCCAAACAAACCACCATTTTTTCCCGTTCGGTGAAGAATG AAGAACCTGTACTTCCTTGAGCCGAAACTGCGTACCACAGCTGTTCCGAG ATGTATATGCATTGAATCCCAACATATGGCAAACAGGTGGGTACAAAACG ACTGCATCGGTGATAGTGGTTCAGGGGTGAAGAATGGACTATCTGGCGAA GCAGGGGGCGCTTTGCCATCAGGTGATATCATACGGAACCGCAATAACAG GAATGGGGGCGGTTATTGTTGCCGTCAATGGCGGTTTGATTGGAGGCAAG GGGTGGGATATTGAATTTGATTATAAGGGTTTTGTTTGGTAAAGTACAGC GATTTAGCGTCGAAAACAGCAAAAAAACAGTGGTCGTTGAAGCCGTGTGA TGCGATATCTCATTGTTAGATCGTCCATTTCTCGTTGGGTACGTTATATA CATAATAGCTTGAAGTATACATATACGCCGTTCCGAATGCACACAGACCG AGATGTTTTTAAGGCTAATACAACGGAAGCGATCAGGTTACTCTTAGTTC TGACGCCTGCATGATACATGAAAACAGTAAATCGCACCTCGAAACCCCGT AGAGTCCGCCTCTCATACGCCGACCCATCTTAGCCAACGACGCGAGCACA CTTAGGGCATACATACAGATAGTTCCTCTGTCTCATAAATATACTCCATT ATGCTTATAGAGGCACTTAAGCGTCTCCGATATTATACTTTATTATCATG GAATTCTACATGCTTTTGCGTTGAAAAACATATTTTTGGTCAAACAGTTG AATCTTAACACCAAAACACGGGCCGTGAAAAAAGGTACTCGGCCAACAAA ATGCCCTTTTGTGGGACTTTCTCCCCTAGAACTCGAAAAGGAACGTGCAC GTTTTGGCGTTTCGGCTGGGTGCTTTTATTCACGGCACGTGTTTTGGTGT TAAAACTAAACTATTTGACTCAATATTTTGGTGCTCAACCCCCCAAAAAT GTTGGATTCTAATTTTTTAATCGGAGATAGTTTAAGGGCGTCTCTAATCA CAACATACTGTACTTATGGGACAACACCAAAAGTTCCGAAAAAGGGTCAT TATTCGGCAGAGCAAGTTTTTTCATGGCACGTGTTTTGGTATTAAAAGTC GACTGTCTGGCCCAAACTTGCGGATTTCAACCCAAAAACATATACAATCC CATAAAAAATAAGCAAATAGAGGGAAGATGTTTAAGTACATCTATAATCA TAACTGAGTATACTTGAGAGTCAGAGAAAGTATGTACATATCAGACCGAC GTACATAATTCGCCACCTTCCACAAGGAAGAGCTCCAAATCGCCCGTCTT CTTTTACCAGCATCCAAAGCGTCACCGGAGTCCGAGTCTTGGTCTGTACG TCCTATCGTCAGAATCGCCAACACGGAACAGGCGGCTTCAAAGAGACGCC AAAGGTGAGCAGTTCCAACACTACAAAAGGCTCCGTTGCGGAAAGACTGA AATGCACCCAATTATTTAGCGTCTTTGCGTTTGCCGTGTCTATTACACGT CGAGATATACTGTATTTCTTGCCAGGTGGGGCAAAGTTGGGCTTGTAACG GGGGTGAATAGAGGAAATATTGCAACGCACCAATACTGTTGAGGTTGCCT GGAAGATTTCAATGGACGAATCACACCTTGGCAGTCCATCTATTTGCTAT AATACAAGTCACGAGGTTTGTACGCTCACATCAATCATGGAGAGCACGTT TCTGAGGCCCTTTCTCATACAAAAACACCTCGTCAGGTATACGTCAACAA ACAGAGGTAGCAAATTTTGCGACGAGTGATGTTTATGTGCCCATTCCAAT GCATCAAGTAGGTACCTCCTCAGAAGAGGGGGGGGGTCGTTTCAAGGTAC GTTGACAGGTCTTGGTTTGTCTCTGATACTCCCGAAGTAGCCACGAACGA ATACGAGTACTCTGACTCACACACCATATCGGGAATAACTTATACCTGAG AGCCGTTCAACGATCGAGGGGTCAAAATGTTCCAATTATCAGGAGCCACA AGCTCCTTCAACAGAACGCACCCGGGGATTCTGCCCTCAACATCGTCCCC TGTATTCCTCTGCATAGCCTTCATCGGTCTCATGACTTGAAACGACACCT AAAAAAGCGTCGTTCTACAGCGTTGGATCGGGGAAAATGTAACACTTCGA AGTACATCATTAATGTCCTCGCAAAAGGTTGAAATGTGAGCTTCCTTCCC GTGAGTCTTATGGGTCAAACACGTTAGTTGCGCTCGATCGTTGCACGACT CCTGATCAGGTTCACGAAACAACGGAGCACAAACCATTTGAATTGTTCGG CTTTGCGACAGGGGTTCGTGCCAGGGCAAGGCACTGAACCAGAAACCCTT ACGCGACCAAACAAGGAACTTGGGCCTTGCATGTCGTTCTCAATCCTGAG ACATTTCTTCCACGATAAAAGTATCAAGACAATGAGTGATCCCAGCCAGG TCTTGAACGTGGCGTTGAATGAAACCGCCCTCTATACATGTGTTCGTTCC GCTGACCAAAAACTTGCAGGAGGTCCTCTTTGCTCCCGCGTGCTCTCCTC AATGTGAGCGCCGGTGACGGTAGAAAGGAAATGAAAGCGGTGCTATCTCC CCGAGAGGAAAAAAGGAATGCATCGCTCTCTCCGCCTGATGTGCCCATAT CGTCTGGAGCTTCGAAGAATCGTGGTTTGGACTCTCCGGCGATAACGGTG GTGCCGGCGACAATGGTGGTGGGGGTGAGCGATGAGAGTAGCCCTGGAGG GGCGATTGATCACCCATCGGAGGCAGAGATGTTCAGCACGGAACCTTTCA ACGACGCTCTTGACCAGGTTACATGGAAAGCAGCAGAATATAGGGATTTG GAGATGAGAGAGAGATAAAGAGAGAATTGACCCTCTGCGCCGGTTTGTAT TGGAATGTGTCGAAAACATTTGTTTTGGTGGCACCCACTTTTCTCGCGTA TGGTAATCCAATAACAACGGCACAATCGAAACGGCGGCTTCAGCTCATTG AGGGTTTCGGGTGGTTGCAGCTACAAAGGCTCGGATTTGGCTAAGTTCGT GGATAGTATTAGTATCGAGTGTGCCGCTTGGGTGTTGTTTTGCTCCACGG CAAGCAAGCTCAGGTAGATTTTCCGTGAGAGAACGCGGATTAAACACTGA GATACCCCGAACATCCGGCAGTTGTGTTGCGGTTGAGTGTCCCTTCTGGT AGAATTTTAGCCATCAGAGAGGTAATCACAGACAGCAGGAGAAATATCCA ATCATCTTGACTGGTCACACTACAGGCGAAATATTGTTTCCATGATTCAG CGTGTTTGAAGGGAAACAGTAAGTGCTGGGAGTATTCCCCTACCGGACTC AACGATGGATGTCCCAAACCCTTCCAGCTATCATCGTACAATGAAGACAG CGCAGGTACCTTATGCACATGGCAGCCATCCTACGCTACCAGGACATCCT ATCTCACCATACACCCAACCACTCATCTGCCCGTTCATTTCTTCTCTATA TCACCAGTCCGCAAGCGATGAACAGGACGCCCCCAAGACCCCAGACGCAT CGAGCGCGAGGAAATCTTCGCCGTGCCGCCCAACGCCCCGCCTACCTTCT CCTTCGTCCTCGGCCATGCCTTGGGGCATACCGGTACCTTTATCGACCTC TCCACCAGGGCTACTGCACCATACCCCGCCATACTCAACATTGAACGATA CTCTTGCATCAGAGGATGTTGGCGGCTCAACTGTGATTCCAAACGCGACT GCGCGTGTGCAGCTGTCTCCGGTCTCGACTGAACCGTCGCCAACGGCGAG GGAAGCATCGGTGGCAGCAGCGGCGGCAGCGACAACGGCGACGGCACGGG GGGGGGGGACAGGAGAATCTCGGCGGAGGCCGGGCGAGCGCCCTCGTCGA CAAGTAGCTCAACCTGTGTCGTACCAAGAACCGTTGCTCAACGTCAAGAT GCGCAAGTAAGTACCGTTGCGAACCTATGACTAGTGGGCATGTCACCTTT CAATAACGTAAAACATGCCATCTTCTCCGCTAATGCGAAGCCAACGACCA TGAACCCACGAGTTGGGCTGGTGTTTCGAGTCACTTTAAGCGGCTCGAAA ATAACGAAAATCAAAAGAAACTTTAATTGATTCAATGGCGTACGTTCACG CATCTCTAGAGGCGCACAAAATCCCGATTCGATACGACCGTAATGTTCAA GGGGGAAAAGATGTTTTGCAGAGCCGCTCCCAAAAATGGCTCCAAATGTG AAAAAAAACAATGGTAATAATCCGTTATGGATTATCAAAGGTTAGTGGAT TCGGCGAAGGTTATGAGGTTTCCCTCGTCTTATATTCCAAGTATGTAGGT TGGTCATTTTCCATTTCACCCAAAATGACCGCGGGCCGAGAAATATAGCT GATGTGATAAAACAAAAGGATTACAAAACAACTGCTGGTCATATCAATTT CACTATGGCGGGCCGTCGCCCATGGTAGGGTACAATGACAGGCTATACCG TAAGTTTGCTCTATCTCAGTGTCGTACCCAGCAGTGTGTGGGAAATCGCA GTACAGAGATCTTGGGCAGCTTTTCCTTCCTTTTGTTATTTGATCTGTTT GAGCCGTAACGTGAATAAGTTCTTTGGTTTTGATTTCTGGATGTCTGATA TTTAATAAAATTATAGACCAAATATCCTAACATTCACTGTTTTTTGTTTT TCATTTTTGTGAAATGACGAATACATCAATACACGAATGCTACGGAATGC AATTGATATGACGGCACACGAGCTACTGGCAAATCCACACAGGGCTAGGA TCTAGGTAGTAGGCCGACAAATCTATCAGATTGTCGCTTTGTTTTTGTTA TCTTGTGTCCCAACCCTCCAAGCGCTTCGTGAGGCATCCTCTTCGTGGGG TTATAACAGATTATCTGAAAAAATGGCCAAAATACGCTATACCGTGCGTT TTCTTATTTTTGTTTAAGGTTATTACCATCGCTGGGGATAATACGCTCAG CGACCCCCCCCCCGCCCGCCTTCTACCATAGCCCGACCCCCAGAAGAGAA TGAAAGCTCACGCTGCTGGGCACACACAGATTGATGTGCTGGTCTTACTC GGCTGAAAAAATATTCAAATTGATACATGCTCTGACCCATCAGTCTGGGT TCTTACGGTGTTTCGGGAACATCTTTTGTAATTTGGAGTTTCGTGGATGC AAAATTACACGATTCGAAAGTCTACACGTTCGGCTTGCATGTACATATCT TCGAAATTAATTTTGAATTCGTACTGGTGGAGAACCGGACATCTCAACAT GTTTTTTTTGTTCGAAAAATGACGGATTTGACAAAAACCCGGAAATCGGC CGCAATCGACTGAAAATCGTGGTTACTATTTGATAAAATGTCAAGGAGAC TTCCGATGAAGAAATGGTTTGTTGAGTTGTATCATTTGGCGTTTCATGCA ATCAACTCATTGTCCATCACTGCCTTCTTCTCCTTCAATCCATCAATCCA AGGCCGCGTCGTAAGAGTCTCCGTCAATCTGGACCTACTGTTCCTAAAGC CTATCACGGTGCCTTTTCCTCGTCTCGGTGTGCTCAACATTGAAATCGCT CCCGCCCAGCGTTCCCAACTTCTGTGTGTATGTTTTGAAGATGCTTTGTC ATATCCTTTCTAAAAAATATCCGCGTCATACTCTTCGTACATTGTCTTAA CTCTCTTCTTCATAAGGTCTTCTACTGTGCGGTAGCACTCCCACACACTC TGGATTTCAGAGATGCGGAAAAACCCAAATCGATGATGTTGAGGCAGGGA GCCTGTGCCGGCTGCGTTACAAGCTTGATGTTCCATCCGTCTTCCCTCCC TACCAGGTTTCGCTTCCTCGGCGTCACCTTGCCCGTATGTTGGCTCGTGC CGCCCTGCTGCACGACTACTTCCTCCTCCCCCAACCATGACATTTTTCTT TGAGTATGGGGAGGAAAACGTCCATGTACCACTCCTGGTAGCACCCGCTG TCAATGTTGACATCGATCTTGTACTCGCCACTCATTTCGCGACGAGCGGC GCTCCACTGCGGCTCTTTGTATGAGTGAGGCTCTTCGTTTGCGCTATTGC TCGTTTGGAAGATCTACGCGCATGTAAAGAGATGGCTCGTGAAACAACGG AAAACGATCATTTTTGGTCGATTTCGGCCGATTTCCGGGTTTTTGCTAAA TCTGCCATTTTCGAAAAAGAAGGCGTATTGAGATGCCCGGTTCTCGACCA TTTTGAATTCAATCCGAACGTGTAAGCTTTCGAATGATACATTTTTTTTT CATGAAACCCAGAATTGCAAAATATATTCCCACAATACAGTAAAAATCCA GACTTGTGGGTCAAAGGAATATACGGTCCTTACGACGTAACCCCTGAAGC CATTCTACTGTAGGTCGTATCTGCGTTTCTTGCGTCGTGCACATATATAT TGACGGGTTGTTGGGGTGAGGATAAGTCAGCTGATTGCCACAGGAGGACA GATAGACCGTGATTGATTGGTTTCCTTCGGGGAAAAGTGGCAAAGCCCCT TAGCGCTCCAGGTAAAGGACCCGAGAGGTATGTGACTCTCAGGAGATATG GTGGCGGGGGCGGGGGCTGCTCACCGACACTCGGCGTATAGTTAATGTTG TCGAAGGGTAAGTTTGAAACGTGCATGGAAGTCTGGGGTACGATTGAAAT AATGCGGTCCGATAGCTCGTGCCCCCTCAGGCCTCCTTGGACTCTCAGGA GTTTGTCCCTCTTCAGCAGACTATAGTGACATACATGCATTGCCAAACCG AGTTGCCATGACAACGTCTCAAAACATGAAGCTTGATCTAAGTTGACTTG TAGTACACCTGCTGTAGAAGCCGTCAGCACGAAAAGACCAACCCAAAACG TATCCCTCCCTCTTGGAAAATACGACATTCAAATTGGTTCATCTCGCAAA AAAACGTTCTCGGAGAGCACCTCTCCGGCATTGACTTGCATTTATGTATG TTTCCATTGCTAATAGTGCGGCCCGACCTTTTGTAATCTCTCACCTAACC CTCTGTAAAATGGTTGTGACGACTGCTGGCGCGTGCAGGGGGCACGTTAT GTTTCCCAAGGCGAAAGGGCAAGGGCAAAGGGGCCCTAACAAAGACAAAG AAAATGACGGGCGGGAGCGAGGAGAACGGGGTGATAAAAAGCCATGATGC GTGCATTCTGCCATCGCGCGCTCTCACTACAATAAACATTTGACCATATC GGTCTCGCTGCACTGACTTCGGTCACCATGGGCCCCTGCGTGGCGTGGCG TGGCGTGGCGTGGCGTGGCGTCGCCGGGGGGTCCGAGAGTTGCAGAGATA CGTTGATTTATCGACTTGTATACCAGGCTGGGCTAGACTGGACTGGACTT CTTGGCCGTGTGTAGCTCCATCGGTGTCCTCGCTGTAGGATACATCTGCC TCACAACGCGTCATTGTTTGGCTGGATATTGTATCGTAGGCATGCGCGCG GGGGCACCCGATTGGATTGGGCCCAATGACAACTTTGTTAGCGATAGCAA TATCGTTGCCTTGGGGATTGACACCCACATACAACTTGATATTATAGTTG TTATGGTGGGTTCTTACGGCGCGAGAATTGACAACATGGTCCTTCTCTCA ACTATTACAGGCTACCTGGAACGACACGCATTTCAACATTTGCCTCACAA AGCTGCTATCCGTGCCCCCAACAATTGTTGTTTCAGGTTGCAACATACAA CTACTGGTATAGAGTCCATGTATGAACAAGGTGTATCAAGAATAGATATT TTGCTGTGAAAATAACGAGGAGTACTGTATACACACTCCTCGTGTAGTTA GGGTAGAGTCACGACATTGGACGGTATTTATTTCACCAACATGAGTATTA GAGATCAACTATTCGAGTTATCAGTGAAGGGAATGGGAGTGAGGTAGTGA AAAGCGGTCAATGAGTTAGGGTACACCCCAGACCGCGTGGTGTGGCTCCA TGAAAGGCGGTATAGGTTAGACTGCATGGTAGTAGGGCTGAAAGTCATAC TTACCGTACTAATACCTGTGGTAGTTCAACTCCGCGTATGATATCACTGA TTAGAATGCTAGTGAGGGGTGGAATAAGCATCTCTTCGACAATACATCAG CAGTTAGGTCAGAACAATCTGAATTGTGGTGAAAAGGCTGAGGACTC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1544:10714..20660-

>mRNA_H-paniculata_contig1544.3186.1 ID=mRNA_H-paniculata_contig1544.3186.1|Name=mRNA_H-paniculata_contig1544.3186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2814bp|location=Sequence derived from alignment at H-paniculata_contig1544:10714..20660- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTAGCAGTCGGACACAGAATCAAAAACCCAGCAACTTCACTACCTCA
TCTCCAGATGGTAGCAGTCGGACACAGAATCAAAAACCCAGCAACTTCAC
TACCTCATCTCCAGGTGCCAATGAGCACACGCCGACGACTGGCAGGGCGC
AACTCCCAAGCAGTCCGCAGTAGGAGCGGACTTCAACCATACCACCAGGC
TATACTTCAACAGGTGCCAATGAGCACACGCCGACGACTGGCAGGGCGCA
ACTCCCAAGCAGTCCGCAGTAGGAGCGGACTTCAACCATACCACCAGGCT
ATACTTCAACAGGGGCCACGAATCGCGGATGTTCAGCGCGAGAACCAAAA
GCTACGCACTCTCAATGAAGGACTGCACAACCAAAACGCCGATCTTGCTA
GAGAACTGGGGCCACGAATCGCGGATGTTCAGCGCGAGAACCAAAAGCTA
CGCACTCTCAATGAAGGACTGCACAACCAAAACGCCGATCTTGCTAGAGA
ACTGAACGAGGTCAAGTCCAGGTTGCAAATTCATCGGCAGCGACAACGCG
AAATGGAGCGAAATCTATATAAACGCGTCAATAACGCACAGACTTTGAGA
GGACTCGCCGGGGCAAGACGCGGAACGAGGTCAAGTCCAGGTTGCAAATT
CATCGGCAGCGACAACGCGAAATGGAGCGAAATCTATATAAACGCGTCAA
TAACGCACAGACTTTGAGAGGACTCGCCGGGGCAAGACGCGGGTGGGTAC
AAAACGACTGCATCGGTGATAGTGGTTCAGGGGTGAAGAATGGACTATCT
GGCGAAGCAGGGGGCGCTTTGCCATCAGGTGGGTACAAAACGACTGCATC
GGTGATAGTGGTTCAGGGGTGAAGAATGGACTATCTGGCGAAGCAGGGGG
CGCTTTGCCATCAGCATCCAAAGCGTCACCGGAGTCCGAGTCTTGGTCTG
TACGTCCTATCGTCAGAATCGCCAACACGGAACAGGCGGCTTCAAAGAGA
CGCCAAAGCATCCAAAGCGTCACCGGAGTCCGAGTCTTGGTCTGTACGTC
CTATCGTCAGAATCGCCAACACGGAACAGGCGGCTTCAAAGAGACGCCAA
AGGAGGTCCTCTTTGCTCCCGCGTGCTCTCCTCAATGTGAGCGCCGGTGA
CGGTAGAAAGGAAATGAAAGCGGTGCTATCTCCCCGAGAGGAAAAAAGGA
ATGCATCGCTCTCTCCGCCTGATGTGCCCATATCGTCTGGAGCTTCGAAG
AATCGTGGTTTGGACTCTCCGGCGATAACGGTGGTGCCGGCGACAATGGT
GGTGGGGGTGAGCGATGAGAGTAGCCCTGGAGGGGCGATTGATCACCCAT
CGGAGGCAGAGATGTTCAGCACGGAACCTTTCAACGACGCTCTTGACCAG
GAGGTCCTCTTTGCTCCCGCGTGCTCTCCTCAATGTGAGCGCCGGTGACG
GTAGAAAGGAAATGAAAGCGGTGCTATCTCCCCGAGAGGAAAAAAGGAAT
GCATCGCTCTCTCCGCCTGATGTGCCCATATCGTCTGGAGCTTCGAAGAA
TCGTGGTTTGGACTCTCCGGCGATAACGGTGGTGCCGGCGACAATGGTGG
TGGGGGTGAGCGATGAGAGTAGCCCTGGAGGGGCGATTGATCACCCATCG
GAGGCAGAGATGTTCAGCACGGAACCTTTCAACGACGCTCTTGACCAGTC
CGCAAGCGATGAACAGGACGCCCCCAAGACCCCAGACGCATCGAGCGCGA
GGAAATCTTCGCCGTGCCGCCCAACGCCCCGCCTACCTTCTCCTTCGTCC
TCGGCCATGCCTTGGGGCATACCGGTACCTTTATCGACCTCTCCACCAGG
GCTACTGCACCATACCCCGCCATACTCAACATTGAACGATACTCTTGCAT
CAGAGGATGTTGGCGGCTCAACTGTGATTCCAAACGCGACTGCGCGTGTG
CAGCTGTCTCCGGTCTCGACTGAACCGTCGCCAACGGCGAGGGAAGCATC
GGTGGCAGCAGCGGCGGCAGCGACAACGGCGACGGCACGGGGGGGGGGGA
CAGGAGAATCTCGGCGGAGGCCGGGCGAGCGCCCTCGTCGACAAGTAGCT
CAACCTGTGTCGTACCAAGAACCGTTGCTCAACGTCAAGATGCGCAATCC
GCAAGCGATGAACAGGACGCCCCCAAGACCCCAGACGCATCGAGCGCGAG
GAAATCTTCGCCGTGCCGCCCAACGCCCCGCCTACCTTCTCCTTCGTCCT
CGGCCATGCCTTGGGGCATACCGGTACCTTTATCGACCTCTCCACCAGGG
CTACTGCACCATACCCCGCCATACTCAACATTGAACGATACTCTTGCATC
AGAGGATGTTGGCGGCTCAACTGTGATTCCAAACGCGACTGCGCGTGTGC
AGCTGTCTCCGGTCTCGACTGAACCGTCGCCAACGGCGAGGGAAGCATCG
GTGGCAGCAGCGGCGGCAGCGACAACGGCGACGGCACGGGGGGGGGGGAC
AGGAGAATCTCGGCGGAGGCCGGGCGAGCGCCCTCGTCGACAAGTAGCTC
AACCTGTGTCGTACCAAGAACCGTTGCTCAACGTCAAGATGCGCAAGGGG
CACGTTATGTTTCCCAAGGCGAAAGGGCAAGGGCAAAGGGGCCCTAACAA
AGACAAAGAAAATGACGGGCGGGAGCGAGGAGAACGGGGTGATAAAAAGC
CATGAGGGGCACGTTATGTTTCCCAAGGCGAAAGGGCAAGGGCAAAGGGG
CCCTAACAAAGACAAAGAAAATGACGGGCGGGAGCGAGGAGAACGGGGTG
ATAAAAAGCCATGA
back to top