mRNA_H-paniculata_contig15231.3082.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15231.3082.1
Unique NamemRNA_H-paniculata_contig15231.3082.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: A0A8F0FDG9_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDG9_9PHAE)

HSP 1 Score: 592 bits (1527), Expect = 6.740e-213
Identity = 304/327 (92.97%), Postives = 316/327 (96.64%), Query Frame = 1
Query:    1 MNLPFIIFILVNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            MNL FIIF L+NI+SLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGY+GLLQPLADGLKLFVKET+LPTNANL+LFVIAPLITFILSLISW VIPFGEGQVIADLHLGILYSLA+SSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIV SQ DVWL+FPLLPL IMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTS+LFLGGWLPVFGLT I SSIWFGLKICIFV+LF+W+RAILPRYRYDQLM LGWKCFLPLSLGF+F  VGLLVSFNLLPN
Sbjct:    1 MNLSFIIFTLINIISLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYMGLLQPLADGLKLFVKETLLPTNANLILFVIAPLITFILSLISWVVIPFGEGQVIADLHLGILYSLAISSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVFSQIDVWLIFPLLPLSIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSVLFLGGWLPVFGLTFISSSIWFGLKICIFVVLFIWVRAILPRYRYDQLMKLGWKCFLPLSLGFIFFIVGLLVSFNLLPN 327          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: Q2TUC9_DICDH (NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dictyota TaxID=2875 RepID=Q2TUC9_DICDH)

HSP 1 Score: 545 bits (1404), Expect = 3.070e-194
Identity = 276/316 (87.34%), Postives = 297/316 (93.99%), Query Frame = 1
Query:   34 NILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            NILSLVVPLLI+VAYFTLAERKIM SIQRRRGPNV+GY+GLLQPLADGLKLFVKETILPTNAN  LF+IAP+ITF+LSLISWAVIPFG GQVI+DLHLG+LYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILV V++CVGSANL+EIVLSQ DVWL+FPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NMLFMSALTS +FLGGWL +  L  IP S+W G+KIC FVILF+W RAILPRYRYDQLM+LGWKCFLPLSL FLFL VG+LVSF+ LPN
Sbjct:    7 NILSLVVPLLIAVAYFTLAERKIMASIQRRRGPNVVGYMGLLQPLADGLKLFVKETILPTNANTFLFIIAPIITFVLSLISWAVIPFGNGQVISDLHLGVLYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVTVIVCVGSANLTEIVLSQMDVWLIFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLFMSALTSTVFLGGWLSIPYLGFIPGSVWLGIKICFFVILFIWARAILPRYRYDQLMDLGWKCFLPLSLSFLFLIVGVLVSFDWLPN 322          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: A0A4Y5T7T0_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7T0_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 4.760e-187
Identity = 271/316 (85.76%), Postives = 288/316 (91.14%), Query Frame = 1
Query:   34 NILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            NILSLVVPLLI+VAYFTLAERKIM SIQRRRGPNVIGY+GLLQPLADGLKLFVKETILPTNAN  LFV AP+ITF+LSLISWAVIPFG GQVIADL LGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGF+LV V+LCVGSANL+EIVLSQ +VWLVFPLLPL IMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NMLFMSALTS+           L  IP S+WFGLKICIFV+LF+W+RAILPRYRYDQLM+LGWKCFLPLSL F FL  GLL+SF+ LPN
Sbjct:    9 NILSLVVPLLIAVAYFTLAERKIMASIQRRRGPNVIGYMGLLQPLADGLKLFVKETILPTNANTFLFVFAPIITFVLSLISWAVIPFGNGQVIADLPLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFVLVTVILCVGSANLTEIVLSQVEVWLVFPLLPLSIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLFMSALTSVXXXXXXXXXXXLGFIPGSLWFGLKICIFVVLFIWVRAILPRYRYDQLMDLGWKCFLPLSLSFFFLVAGLLISFDWLPN 324          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: A0A7S6ZPD7_9STRA (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPD7_9STRA)

HSP 1 Score: 494 bits (1272), Expect = 4.020e-174
Identity = 251/319 (78.68%), Postives = 291/319 (91.22%), Query Frame = 1
Query:   28 LVNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFG-LTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            L+ ILSLVVPLLI VAYFTLAERK+M SIQRRRGPNV+GY+GLLQPLADGLKLFVKE++LP+NAN  LF++AP+ITF+LSL+ WAVIPFG+GQV+ADLHLG+LY LA+SSLGVYG++ SGW+SNSKYAFLGGLRSAAQMVSYE+ +GF+LV VVLCVGS NL++IVL+Q +V L+FPLLP+G++FFI CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NML MSALTSILFLGGWLPV   L+ IPSS+W G KICIFVILF+W+RA LPRYRYDQLM LGWK FLPLS+ +L L +G+LVSFN LP+
Sbjct:    5 LLTILSLVVPLLICVAYFTLAERKLMASIQRRRGPNVVGYMGLLQPLADGLKLFVKESVLPSNANSTLFLLAPMITFVLSLLGWAVIPFGQGQVVADLHLGLLYLLAISSLGVYGIVGSGWASNSKYAFLGGLRSAAQMVSYEVSIGFLLVSVVLCVGSFNLNDIVLAQKEVSLIFPLLPVGVIFFISCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLLMSALTSILFLGGWLPVLDILSWIPSSLWLGGKICIFVILFIWMRAALPRYRYDQLMTLGWKSFLPLSIAWLLLTLGVLVSFNWLPS 323          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: A0A1I9LW81_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW81_9PHAE)

HSP 1 Score: 494 bits (1272), Expect = 4.480e-174
Identity = 251/317 (79.18%), Postives = 281/317 (88.64%), Query Frame = 1
Query:   31 VNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            +NIL +V+PLL++VAYFTL ERKIMG IQRR+GPNVIGY+GLLQPLADGLKLFVKE +LPTNAN+VLF++APL TFILSLI WAVIPF  G VIAD+ LG+LY L+VSSLGVYGVLISGWSSNSKYAFLG LRSAAQMVSYEI MG  L+ V LCVG+ NL+EIVL+Q+++WLVFPLLP+ IMFFI CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NML M AL SI FLGGWL  FG+ I+P+ IWFGLKIC FVILF+ IRAILPRYRYDQLM LGWKCFLPLSLG  FL +G+LV F+ LPN
Sbjct:   10 INILDIVIPLLVAVAYFTLTERKIMGGIQRRKGPNVIGYMGLLQPLADGLKLFVKELVLPTNANMVLFILAPLCTFILSLIIWAVIPFSFGNVIADVQLGVLYFLSVSSLGVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGISLLNVCLCVGTLNLTEIVLAQSNIWLVFPLLPVSIMFFIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGALASICFLGGWLSPFGIGILPNEIWFGLKICFFVILFIVIRAILPRYRYDQLMKLGWKCFLPLSLGLFFLSLGILVGFDWLPN 326          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: E6ZEQ7_ECTSI (NADH-ubiquinone oxidoreductase chain 1 n=66 Tax=Phaeophyceae TaxID=2870 RepID=E6ZEQ7_ECTSI)

HSP 1 Score: 489 bits (1260), Expect = 3.000e-172
Identity = 254/319 (79.62%), Postives = 279/319 (87.46%), Query Frame = 1
Query:   25 ILVNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            IL+NI+ LV+PLLI+VAYFTLAERKIM  IQRRRGPNVIGY+GLLQPLADGLKLFVKET+LPTNAN+VLFV+APL TFILSLISWAVIPF  G VIAD  LG LY LAVSSLGVYGVLISGWSSNSKYAFLG LRSAAQMVSYEI MG  L+ V LCVG+ NL+EIV++Q D+WLVFPLLP+ IMFFI CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NML M ALTSI FLGGWL  FG+ I+P  IWFGLKI  FVILF+ +RAILPRYRYDQLM LGWKCFLPL+L   F+  G+L+ F+ LPN
Sbjct:    8 ILLNIIDLVIPLLIAVAYFTLAERKIMAGIQRRRGPNVIGYMGLLQPLADGLKLFVKETVLPTNANIVLFVLAPLCTFILSLISWAVIPFSFGNVIADTQLGGLYFLAVSSLGVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGISLINVCLCVGTLNLTEIVIAQLDIWLVFPLLPVSIMFFIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGALTSICFLGGWLSPFGIGILPDGIWFGLKISFFVILFIVMRAILPRYRYDQLMKLGWKCFLPLALALFFISQGILMGFDWLPN 326          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: A0A1C9TCZ5_HETAK (NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A1C9TCZ5_HETAK)

HSP 1 Score: 483 bits (1242), Expect = 1.840e-169
Identity = 247/326 (75.77%), Postives = 283/326 (86.81%), Query Frame = 1
Query:   13 FIIFILVNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTI---IPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            FII  ++ ILS+VVPLLISVAYFTLAERKIMG+IQRRRGPNVIG+ GLLQPLADGLKLF KETILP+NA+LV+FV AP++TFILSLI WAVIPFGEG +I+D+ +GILY  A+SSLGVYG++ SGWSSNSKYAFLG LRSAAQMVSYE+ +GFI++ VVLCVGS NL+EIVL+Q  +W   PL P+ IMFFI  LAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NML MS+LT+ILFLGGWLP+F +     IPS +WFGLK+CIFV+LF+W RA LPRYRYDQLM LGWK FLPLSLG+L     +LVSFN LPN
Sbjct:    4 FIIINVLKILSIVVPLLISVAYFTLAERKIMGAIQRRRGPNVIGWAGLLQPLADGLKLFAKETILPSNADLVVFVFAPMLTFILSLIGWAVIPFGEGLLISDIQVGILYLFAISSLGVYGIITSGWSSNSKYAFLGALRSAAQMVSYEVSIGFIIICVVLCVGSFNLTEIVLAQKSIWFCVPLFPMFIMFFISALAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLLMSSLTTILFLGGWLPLFDIAPFNWIPSPVWFGLKLCIFVVLFIWFRATLPRYRYDQLMTLGWKVFLPLSLGYLLFTASMLVSFNWLPN 329          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: A0A0U1XDI1_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=34 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDI1_9PHAE)

HSP 1 Score: 482 bits (1241), Expect = 2.340e-169
Identity = 249/319 (78.06%), Postives = 277/319 (86.83%), Query Frame = 1
Query:   25 ILVNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            IL+NI+ LV+PLL++VAYFTLAERKIM  IQRR+GPNVIGY+GLLQPLADGLKLFVKET+LPTNAN+VLF++APL TFILSLISWAVIPF  G VIAD  LG LY LAVSSLGVYGVLISGWSSNSKYAFLG LRSAAQMVSYEI MG  L+ V LCVG+ NL+EIV++Q D+WLVFPL P+ IMFFI CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NML M ALTSI FLGGW   FG+ I+P  IW GLKI  FVILF+ +RAILPRYRYDQLM LGWKCFLPL+L   F+  G+L+SF+ LPN
Sbjct:    8 ILLNIIDLVLPLLVAVAYFTLAERKIMAGIQRRKGPNVIGYMGLLQPLADGLKLFVKETVLPTNANIVLFILAPLCTFILSLISWAVIPFSFGNVIADTQLGGLYFLAVSSLGVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGISLINVCLCVGTLNLTEIVIAQFDIWLVFPLFPVSIMFFIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGALTSICFLGGWSSPFGIGILPDGIWLGLKISFFVILFIVMRAILPRYRYDQLMKLGWKCFLPLALALFFVSQGILISFDWLPN 326          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: A0A344AL68_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sargassum yezoense TaxID=127449 RepID=A0A344AL68_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 3.220e-168
Identity = 246/307 (80.13%), Postives = 272/307 (88.60%), Query Frame = 1
Query:   25 ILVNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLF 945
            IL+NI+ LV+PLLI+VAYFTLAERKIM  IQRR+GPNVIGY+GLLQPLADGLKLFVKET+LPTNAN+VLFV+APLITFILSLISWAVIPF  G VI+D  LG+LY LA+SSLGVYGVLISGWSSNSKYAFLG LRSAAQMVSYEI MG  L+ V LCVG+ NL+EIV++Q D+WLVFPLLP+G+MFFI CLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NML M  +TSI FLGGWL  FG+ I    IWFGLKIC FVILFV +RAILPRYRYDQLM LGWKCFLPL+L F + F
Sbjct:    8 ILLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLFVKETVLPTNANIVLFVLAPLITFILSLISWAVIPFSYGNVISDPQLGVLYFLAISSLGVYGVLISGWSSNSKYAFLGALRSAAQMVSYEISMGIGLINVCLCVGTLNLTEIVVAQRDIWLVFPLLPVGVMFFIGCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLVMGGVTSICFLGGWLSPFGIGIFSDGIWFGLKICFFVILFVVMRAILPRYRYDQLMRLGWKCFLPLALAFFYSF 314          
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Match: D2Z214_9STRA (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Chattonella marina TaxID=90936 RepID=D2Z214_9STRA)

HSP 1 Score: 468 bits (1205), Expect = 7.840e-164
Identity = 237/321 (73.83%), Postives = 273/321 (85.05%), Query Frame = 1
Query:   28 LVNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYIGLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGEGQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVSYEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSILFLGGWLPVFGLTII---PSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLGWKCFLPLSLGFLFLFVGLLVSFNLLPN 981
            L+ IL++VVPLLISVAYFTLAERKIMG+IQRR+GPNVIG+ GLLQPL DGLKLF KET+LP+NA+ V+F+ APL+TFILSL+ WAVIPFGEG  ++D+ +GILY   +SSLGVYG+L SGWSSNSKY FLGGLRSAAQMVSYE+ +GFI++ VVLC GS NL+EIVL+Q  VW   PL P+ IMFFI  LAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEY+NML MS+L +ILFLGGWL +  L      PSSIWFGLK+C FVILF+W RAILPRYRYDQLM LGWK FLPLSLG+L +   +L+SFN LPN
Sbjct:    9 LLKILAIVVPLLISVAYFTLAERKIMGAIQRRKGPNVIGWAGLLQPLTDGLKLFAKETVLPSNADFVIFIFAPLLTFILSLLGWAVIPFGEGLFVSDIQVGILYLFGISSLGVYGILTSGWSSNSKYPFLGGLRSAAQMVSYEVSIGFIIICVVLCAGSFNLTEIVLAQQSVWFCVPLFPMFIMFFISALAETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYANMLLMSSLITILFLGGWLSLIDLPPFNWAPSSIWFGLKVCFFVILFIWFRAILPRYRYDQLMTLGWKVFLPLSLGYLIVTASVLISFNWLPN 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15231.3082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FDG9_9PHAE6.740e-21392.97NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pro... [more]
Q2TUC9_DICDH3.070e-19487.34NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dic... [more]
A0A4Y5T7T0_9PHAE4.760e-18785.76NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Dic... [more]
A0A7S6ZPD7_9STRA4.020e-17478.68NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sch... [more]
A0A1I9LW81_9PHAE4.480e-17479.18NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Ple... [more]
E6ZEQ7_ECTSI3.000e-17279.62NADH-ubiquinone oxidoreductase chain 1 n=66 Tax=Ph... [more]
A0A1C9TCZ5_HETAK1.840e-16975.77NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Het... [more]
A0A0U1XDI1_9PHAE2.340e-16978.06NADH-ubiquinone oxidoreductase chain 1 n=34 Tax=Ph... [more]
A0A344AL68_9PHAE3.220e-16880.13NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sar... [more]
D2Z214_9STRA7.840e-16473.83NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Cha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15231contigH-paniculata_contig15231:4378..5361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score431.4
Seed ortholog evalue3.7e-118
Seed eggNOG ortholog70448.Q0P3G2
Preferred namenad1
KEGG rclassRC00061
KEGG koko:K03878
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko05012,map00190,map01100,map04714,map04723,map05012
KEGG ModuleM00142
Hectar predicted targeting categorysignal peptide
GOsGO:0006091,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0044237,GO:0045333,GO:0055114
EggNOG free text desc.NADH dehydrogenase
EggNOG OGs34KCT@3041,37V23@33090,COG1005@1,KOG4770@2759
EC1.6.5.3
COG Functional cat.C
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Exons1
Model size984
Cds size984
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929220.6810153-CDS-H-paniculata_contig15231:4377..53611622929220.6810153-CDS-H-paniculata_contig15231:4377..5361Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15231 4378..5361 -
1691480775.7383957-CDS-H-paniculata_contig15231:4377..53611691480775.7383957-CDS-H-paniculata_contig15231:4377..5361Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15231 4378..5361 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15231.3082.1prot_H-paniculata_contig15231.3082.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15231 4378..5361 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15231.3082.1

>prot_H-paniculata_contig15231.3082.1 ID=prot_H-paniculata_contig15231.3082.1|Name=mRNA_H-paniculata_contig15231.3082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=328bp
MNLPFIIFILVNILSLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYI
GLLQPLADGLKLFVKETILPTNANLVLFVIAPLITFILSLISWAVIPFGE
GQVIADLHLGILYSLAVSSLGVYGVLISGWSSNSKYAFLGGLRSAAQMVS
YEIPMGFILVIVVLCVGSANLSEIVLSQTDVWLVFPLLPLGIMFFICCLA
ETNRHPFDLPEAEAELVSGYNVEYSAMGFALFFLGEYSNMLFMSALTSIL
FLGGWLPVFGLTIIPSSIWFGLKICIFVILFVWIRAILPRYRYDQLMNLG
WKCFLPLSLGFLFLFVGLLVSFNLLPN*
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mRNA from alignment at H-paniculata_contig15231:4378..5361-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15231.3082.1 ID=mRNA_H-paniculata_contig15231.3082.1|Name=mRNA_H-paniculata_contig15231.3082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=984bp|location=Sequence derived from alignment at H-paniculata_contig15231:4378..5361- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATTTACCATTTATTATTTTTATTTTAGTAAATATTTTAAGTCTTGT CGTACCTTTATTGATTTCAGTTGCATATTTCACATTAGCAGAGCGTAAAA TTATGGGTTCTATACAACGTCGTAGAGGACCAAATGTTATTGGCTATATA GGATTACTTCAACCATTAGCTGATGGTCTTAAACTTTTTGTTAAGGAGAC TATTTTGCCTACAAATGCAAATCTTGTTCTTTTTGTTATTGCTCCTCTTA TTACATTTATTCTTAGTTTAATTAGTTGGGCTGTTATTCCTTTTGGTGAA GGGCAGGTGATCGCGGACCTTCATTTAGGTATTTTATATTCGTTGGCTGT TTCTTCGTTAGGGGTTTATGGTGTTTTGATTTCAGGTTGGTCAAGTAATT CAAAATATGCGTTTTTAGGAGGTTTACGTTCTGCTGCACAAATGGTGTCT TATGAAATTCCTATGGGTTTTATACTTGTTATTGTTGTGTTATGTGTTGG TTCGGCTAATTTAAGTGAAATTGTTCTTTCTCAAACTGATGTTTGGCTAG TTTTTCCTTTATTACCCTTAGGTATTATGTTTTTTATTTGTTGTTTAGCT GAGACGAATCGTCATCCTTTTGATTTACCAGAAGCAGAAGCGGAGTTAGT TTCAGGATATAATGTTGAATATTCCGCTATGGGATTTGCTCTTTTTTTTT TAGGTGAGTACTCTAATATGTTATTTATGAGTGCATTAACTTCAATTTTA TTTCTAGGGGGTTGGTTGCCTGTTTTTGGTTTGACTATCATACCTAGCAG TATTTGGTTTGGTTTAAAAATTTGTATTTTTGTTATTTTATTTGTTTGGA TTAGAGCTATTTTACCACGTTATCGTTATGATCAATTAATGAATTTAGGT TGGAAGTGTTTTTTGCCTTTATCTTTAGGCTTTCTTTTTCTTTTTGTTGG GTTATTAGTTAGTTTTAATTTATTGCCAAATTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig15231:4378..5361-

>mRNA_H-paniculata_contig15231.3082.1 ID=mRNA_H-paniculata_contig15231.3082.1|Name=mRNA_H-paniculata_contig15231.3082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1968bp|location=Sequence derived from alignment at H-paniculata_contig15231:4378..5361- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATTTACCATTTATTATTTTTATTTTAGTAAATATTTTAAGTCTTGT
CGTACCTTTATTGATTTCAGTTGCATATTTCACATTAGCAGAGCGTAAAA
TTATGGGTTCTATACAACGTCGTAGAGGACCAAATGTTATTGGCTATATA
GGATTACTTCAACCATTAGCTGATGGTCTTAAACTTTTTGTTAAGGAGAC
TATTTTGCCTACAAATGCAAATCTTGTTCTTTTTGTTATTGCTCCTCTTA
TTACATTTATTCTTAGTTTAATTAGTTGGGCTGTTATTCCTTTTGGTGAA
GGGCAGGTGATCGCGGACCTTCATTTAGGTATTTTATATTCGTTGGCTGT
TTCTTCGTTAGGGGTTTATGGTGTTTTGATTTCAGGTTGGTCAAGTAATT
CAAAATATGCGTTTTTAGGAGGTTTACGTTCTGCTGCACAAATGGTGTCT
TATGAAATTCCTATGGGTTTTATACTTGTTATTGTTGTGTTATGTGTTGG
TTCGGCTAATTTAAGTGAAATTGTTCTTTCTCAAACTGATGTTTGGCTAG
TTTTTCCTTTATTACCCTTAGGTATTATGTTTTTTATTTGTTGTTTAGCT
GAGACGAATCGTCATCCTTTTGATTTACCAGAAGCAGAAGCGGAGTTAGT
TTCAGGATATAATGTTGAATATTCCGCTATGGGATTTGCTCTTTTTTTTT
TAGGTGAGTACTCTAATATGTTATTTATGAGTGCATTAACTTCAATTTTA
TTTCTAGGGGGTTGGTTGCCTGTTTTTGGTTTGACTATCATACCTAGCAG
TATTTGGTTTGGTTTAAAAATTTGTATTTTTGTTATTTTATTTGTTTGGA
TTAGAGCTATTTTACCACGTTATCGTTATGATCAATTAATGAATTTAGGT
TGGAAGTGTTTTTTGCCTTTATCTTTAGGCTTTCTTTTTCTTTTTGTTGG
GTTATTAGTTAGTTTTAATTTATTGCCAAATTAAATGAATTTACCATTTA
TTATTTTTATTTTAGTAAATATTTTAAGTCTTGTCGTACCTTTATTGATT
TCAGTTGCATATTTCACATTAGCAGAGCGTAAAATTATGGGTTCTATACA
ACGTCGTAGAGGACCAAATGTTATTGGCTATATAGGATTACTTCAACCAT
TAGCTGATGGTCTTAAACTTTTTGTTAAGGAGACTATTTTGCCTACAAAT
GCAAATCTTGTTCTTTTTGTTATTGCTCCTCTTATTACATTTATTCTTAG
TTTAATTAGTTGGGCTGTTATTCCTTTTGGTGAAGGGCAGGTGATCGCGG
ACCTTCATTTAGGTATTTTATATTCGTTGGCTGTTTCTTCGTTAGGGGTT
TATGGTGTTTTGATTTCAGGTTGGTCAAGTAATTCAAAATATGCGTTTTT
AGGAGGTTTACGTTCTGCTGCACAAATGGTGTCTTATGAAATTCCTATGG
GTTTTATACTTGTTATTGTTGTGTTATGTGTTGGTTCGGCTAATTTAAGT
GAAATTGTTCTTTCTCAAACTGATGTTTGGCTAGTTTTTCCTTTATTACC
CTTAGGTATTATGTTTTTTATTTGTTGTTTAGCTGAGACGAATCGTCATC
CTTTTGATTTACCAGAAGCAGAAGCGGAGTTAGTTTCAGGATATAATGTT
GAATATTCCGCTATGGGATTTGCTCTTTTTTTTTTAGGTGAGTACTCTAA
TATGTTATTTATGAGTGCATTAACTTCAATTTTATTTCTAGGGGGTTGGT
TGCCTGTTTTTGGTTTGACTATCATACCTAGCAGTATTTGGTTTGGTTTA
AAAATTTGTATTTTTGTTATTTTATTTGTTTGGATTAGAGCTATTTTACC
ACGTTATCGTTATGATCAATTAATGAATTTAGGTTGGAAGTGTTTTTTGC
CTTTATCTTTAGGCTTTCTTTTTCTTTTTGTTGGGTTATTAGTTAGTTTT
AATTTATTGCCAAATTAA
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