mRNA_H-paniculata_contig15231.3081.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15231.3081.1
Unique NamemRNA_H-paniculata_contig15231.3081.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0FDI8_9PHAE (SecY-independent transporter protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDI8_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 2.160e-115
Identity = 170/236 (72.03%), Postives = 205/236 (86.86%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNY 708
            M++ K SIHYI+EL+YRLTYT IG  LLFSISY++KQTLIYL+IPKGISHFISTDLTE+FT YL+LCTNIS +IG +I  IQ+YLFLRPGLY  EAKKSFTL+++T+CFY+ IY+L +P+IIQ+SWEFF SYTK FN  QLIFDPQLKNYL ++Y +SIIIN S P+++ LNLILS +QI  LTKHR+I+YFI F  AT+LTPPDIISQTF+G+FII+FYEIQII W+ YKKYNNY
Sbjct:    1 MKKFKFSIHYIHELNYRLTYTGIGTALLFSISYIHKQTLIYLLIPKGISHFISTDLTEIFTTYLNLCTNISIVIGIMISVIQLYLFLRPGLYRNEAKKSFTLIIITLCFYIFIYILALPIIIQLSWEFFSSYTKTFNPTQLIFDPQLKNYLNYIYELSIIINFSYPLIITLNLILSYVQIIILTKHRKIVYFITFTTATILTPPDIISQTFVGVFIIMFYEIQIIIWMIYKKYNNY 236          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0JZS6_9PHAE (SecY-independent transporter protein n=1 Tax=Cymathaere triplicata TaxID=309354 RepID=A0A8F0JZS6_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 2.820e-68
Identity = 115/237 (48.52%), Postives = 163/237 (68.78%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M RLK SI+Y+ EL+YRL Y  +G + LFS +Y YKQ LI++ +PKG+SHF+ST LTE+F  YL LCT  SF  G  I   Q+YLFLRPGLY +EAK +F LL   + FY+ IY +V P+I++I WE F +Y++NF +I L F+P+L++YL+ +  ++  + +S P L++LN+I      +   K+R I Y  AF  A  +TPPD++SQT IG+ +I+FYEIQI FW  Y++Y   L
Sbjct:    1 MNRLKTSIYYLQELNYRLAYAILGTVFLFSTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCTIFSFSFGLGIALTQLYLFLRPGLYAFEAKTTFHLLTTALIFYICIYTIVFPIIVKILWELFSAYSQNFTAIDLTFEPRLQDYLSHLQQLNTALTLSFPCLILLNIIQMYTNRETWIKYRGIAYITAFFIAAFITPPDVLSQTLIGLPLIIFYEIQIKFWSLYEEYKKQL 237          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0K0R7_9PHAE (SecY-independent transporter protein n=1 Tax=Postelsia palmaeformis TaxID=105414 RepID=A0A8F0K0R7_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.610e-67
Identity = 120/237 (50.63%), Postives = 160/237 (67.51%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M RLK+SI+Y+ EL+YRLTYT  G I LF  +Y YKQ LI+L +PKG SHF+ST LTEVF  YL LCT  SF  G  I  IQ+YLFLRPGLY +EAK +F  L+ T+ FY+  Y+ + PVI++I WE F +Y+ NF +I L F+P+L++YLT +  +S  + +S P L+ILN++          K R I Y  AF  A  +TPPD++SQT IGI +I+ YEIQ+ FW  Y++Y   L
Sbjct:    1 MRRLKISIYYLQELNYRLTYTVFGTIFLFITTYTYKQELIFLFLPKGFSHFVSTGLTEVFFTYLQLCTIFSFSSGVGITLIQLYLFLRPGLYTFEAKTAFNFLVTTLLFYIYSYIFIFPVIVKILWEIFSAYSHNFTAIDLTFEPRLQDYLTHLQQLSKTLTISFPCLIILNILRIYTNRHIWVKCRGIAYIAAFSFAAFITPPDVLSQTLIGIPLIIIYEIQLKFWSLYEEYKKQL 237          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A7U1AQD2_9PHAE (SecY-independent transporter protein n=1 Tax=Laminaria rodriguezii TaxID=1740620 RepID=A0A7U1AQD2_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 9.190e-67
Identity = 112/237 (47.26%), Postives = 162/237 (68.35%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M +LK+SI+Y+ EL+YRL+Y  +GII LFS +Y YKQ LI++ +PKG+SHF+ST LTE+F  YL LCT  SF  G  I   Q YLF+RPGLY +EAK +  +L+  + FY+  Y+ + P+I+++ WE F +Y++NF +I L F+P+LK+YL  +  ++    +S P L+ LN+I    + +   K+R I Y  AF  A  +TPPD++SQT IG  +IVFYEIQ+ FW  Y++Y N L
Sbjct:    1 MNKLKISIYYLQELNYRLSYAILGIIFLFSTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCTIFSFSFGLGIIMTQFYLFIRPGLYAFEAKITLNILITALIFYICFYVFIFPIIVKVLWELFSAYSQNFTAIDLTFEPRLKDYLFHLQQLNKAFTLSVPCLITLNIIQIYTKRQTWVKYRGIAYLAAFSIAAFITPPDVLSQTLIGFPLIVFYEIQLKFWFLYEEYKNQL 237          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: E6ZEQ8_ECTSI (Sec-independent transporter protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ8_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 5.240e-66
Identity = 115/237 (48.52%), Postives = 156/237 (65.82%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M+RL+LSI+YI EL+YRL Y ++G  L+F  +Y YKQ LI+L++PKG+SHF+S  LTE+F  Y+ LC  +S   G  + A Q Y+FLRPG+Y YE+     L++   CFY  IY+LV P +I++SWE FL+Y++NF  I L F+P+L NYL  +  ++ I+  S P LL LNL       +   KHR I Y IAF  A  +TPPDIISQ  +G  +I F+EIQII W  YK+Y   L
Sbjct:    1 MKRLQLSIYYIQELNYRLAYAALGTTLIFFTTYTYKQGLIFLLLPKGLSHFVSAGLTEIFFTYIQLCIILSISFGIFLIASQSYVFLRPGMYTYESSTFLKLIISAFCFYTYIYILVFPALIKVSWELFLTYSQNFTPINLTFEPRLNNYLDHIQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIIAFFIAAFITPPDIISQILVGAPLIFFFEIQIILWAFYKEYKKQL 237          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A0U1XGV1_9PHAE (SecY-independent protein translocase component tatC n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XGV1_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 5.780e-66
Identity = 112/237 (47.26%), Postives = 166/237 (70.04%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M+++++ I+Y+ EL+YRL Y+ IG +LLFS +Y+YKQ+LI+LI+P+G+SHFIS  LTE+F  Y+ LCT ISF  G I+  +QIYLFLRPGL+ YE+K +  LL+  I FY  +YL++ P++++  WE F +Y+ NF  I L F+P+L +YL  + +++ I++ S P L+ LNLI    +     K+R I Y I F  A  LTPPDI+SQT + + +I F+E+QIIFW  Y++Y   L
Sbjct:    1 MKKIRIFIYYLQELNYRLAYSVIGTLLLFSTTYIYKQSLIFLILPQGLSHFISAGLTEIFFTYMQLCTIISFSFGIILTVLQIYLFLRPGLFFYESKITLNLLIGIILFYTYLYLILFPLLVKFLWELFTTYSNNFTPIHLTFEPRLNDYLEHIQHLNKILSFSFPCLITLNLIQKYTKKILWVKYRGIAYIIVFSIAACLTPPDILSQTIVALPLIFFFELQIIFWALYQEYQKQL 237          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A089N2X8_PETFA (SecY-independent protein translocase component tatC n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N2X8_PETFA)

HSP 1 Score: 212 bits (539), Expect = 2.990e-65
Identity = 115/237 (48.52%), Postives = 161/237 (67.93%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M++L LSI Y+ EL YRL Y + G ILLF I+Y YKQ LIY+I+P+G+SHFI+  LTE+F  Y+ LC+ IS   G I   +QIYLFLRPGLY +E+K    +L+ T+ FY  +Y  + P++I+  WE FL+Y++NF  I L F+P+L +YL  V +++ ++ +S P ++ LNL+    + K   K+R I Y  AF  A  +TPPDI+SQ FIG  II+FYE+QIIFW  YK+Y   L
Sbjct:    1 MKKLHLSIFYLQELKYRLLYAAAGTILLFFITYQYKQALIYIILPQGLSHFITAGLTEIFFTYMQLCSIISISFGLITAILQIYLFLRPGLYSFESKIVLNILICTLLFYTYLYTTIFPLLIKFLWELFLTYSQNFAPIHLTFEPRLNDYLEHVQHLNEVLCLSLPSIITLNLLQRYTKKKLWVKYRGIAYIAAFSLAAFITPPDILSQVFIGFPIILFYELQIIFWALYKQYQEQL 237          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0K0V4_9PHAE (SecY-independent transporter protein n=2 Tax=Agaraceae TaxID=2012474 RepID=A0A8F0K0V4_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 4.230e-65
Identity = 109/237 (45.99%), Postives = 162/237 (68.35%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M RL++SI+Y+ EL+YRLTY  +G + LF  +Y YKQ LI++ +PKG+SHF+ST LTE+F  YL LCT  SF  G  I   Q+YLFLRPGLY +EA+ +F LL+ TI FY  +Y+ + P+I+++ WE F +Y++NF +I L F+P+L +YL+ +  ++  + +S P L+ L ++      +   K+R I Y +AF  A  +TPPD++SQT IG+ +I+FYEIQ+ FW  Y+ Y   L
Sbjct:    1 MNRLQISIYYLQELNYRLTYAILGTLFLFFTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCTIFSFSFGLGITLTQLYLFLRPGLYTFEARITFNLLITTIIFYSCLYIFIFPIIVKVLWELFSAYSQNFTAIDLTFEPRLHDYLSHLRQLNKALTLSFPCLIALQIVQIYTSRQTWVKYRGIAYIVAFSIAAFITPPDVLSQTLIGLPLIIFYEIQLKFWALYEGYKKQL 237          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A4D6E4S1_9PHAE (SecY-independent protein translocase component tatC n=1 Tax=Nereocystis luetkeana TaxID=117523 RepID=A0A4D6E4S1_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 5.990e-65
Identity = 111/237 (46.84%), Postives = 161/237 (67.93%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M+RLK+SI+Y+ EL+YRL Y   G I LFSI+Y YKQ LI+L +PKG+SHF+ST LTE+F  YL LC   S         IQ+YLFLRPGLY +EAK +F +L+  + FY+ +Y+ + P+I+++ WE F +Y++NF +I L F+P+L++YLT +  +S  + +S P L+ILN++          K+R I Y  AF  A  +TPPD++SQT IGI +I+ YEIQ+ FW  +++Y   L
Sbjct:    1 MDRLKISIYYLQELNYRLAYAIFGTIFLFSITYTYKQGLIFLFLPKGLSHFVSTGLTEIFFTYLQLCIIFSXXXXXXXXLIQLYLFLRPGLYTFEAKTTFNILISALLFYICLYVFIFPIIVKLLWEIFSAYSQNFTAIDLTFEPRLQDYLTHLKQLSKALTISFPCLIILNILQIYTSRNIWVKYRGIAYITAFSIAAFITPPDVLSQTLIGIPLIIIYEIQLNFWSLHEEYKKQL 237          
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0FBK4_AKKLU (SecY-independent transporter protein n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0FBK4_AKKLU)

HSP 1 Score: 211 bits (536), Expect = 8.480e-65
Identity = 114/237 (48.10%), Postives = 162/237 (68.35%), Query Frame = 1
Query:    1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711
            M+RL+ SI+Y+ EL YRL Y ++G IL+F  +Y YKQ LI++ +PKG+SHF+ST LTE+F  YL LC  +SF +   I  I++YLF+RPGLY YEA+ S +LL+ TI FYL +Y LV P +++  WE F  Y+K+F  I L F+P+L +YL  +  ++  +++S P + +LN+I +    +A  K+R I Y I F  A ++TPPDI+SQ  IGI  I  YEIQIIFW  YK+Y+  L
Sbjct:    1 MKRLQFSIYYLQELKYRLAYAALGTILIFCTTYKYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCLTLSFGLSIGIVLIELYLFIRPGLYAYEAELSLSLLIGTILFYLCLYSLVFPTLVKTLWELFSMYSKDFTPIHLTFEPKLNDYLQHLQQLNKTLSLSFPCIFLLNIIQTYTNRRAWVKYRGIAYIIGFTVAALVTPPDILSQMLIGIPFISVYEIQIIFWSLYKEYHKQL 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FDI8_9PHAE2.160e-11572.03SecY-independent transporter protein n=1 Tax=Proto... [more]
A0A8F0JZS6_9PHAE2.820e-6848.52SecY-independent transporter protein n=1 Tax=Cymat... [more]
A0A8F0K0R7_9PHAE1.610e-6750.63SecY-independent transporter protein n=1 Tax=Poste... [more]
A0A7U1AQD2_9PHAE9.190e-6747.26SecY-independent transporter protein n=1 Tax=Lamin... [more]
E6ZEQ8_ECTSI5.240e-6648.52Sec-independent transporter protein n=2 Tax=Ectoca... [more]
A0A0U1XGV1_9PHAE5.780e-6647.26SecY-independent protein translocase component tat... [more]
A0A089N2X8_PETFA2.990e-6548.52SecY-independent protein translocase component tat... [more]
A0A8F0K0V4_9PHAE4.230e-6545.99SecY-independent transporter protein n=2 Tax=Agara... [more]
A0A4D6E4S1_9PHAE5.990e-6546.84SecY-independent protein translocase component tat... [more]
A0A8F0FBK4_AKKLU8.480e-6548.10SecY-independent transporter protein n=1 Tax=Akkes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15231contigH-paniculata_contig15231:3653..4375 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score84.3
Seed ortholog evalue8.3e-14
Seed eggNOG ortholog1105110.MC5_01765
Preferred nametatC
KEGG koko:K03118
KEGG TC2.A.64
KEGG Pathwayko03060,ko03070,map03060,map03070
KEGG ModuleM00336
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680
EggNOG free text desc.Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides
EggNOG OGs1MVAY@1224,2TTIX@28211,47FAE@766,COG0805@1,COG0805@2
COG Functional cat.U
Best tax levelRickettsiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044
Exons1
Model size723
Cds size723
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929220.6331735-CDS-H-paniculata_contig15231:3652..43751622929220.6331735-CDS-H-paniculata_contig15231:3652..4375Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15231 3653..4375 +
1691480775.7281044-CDS-H-paniculata_contig15231:3652..43751691480775.7281044-CDS-H-paniculata_contig15231:3652..4375Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15231 3653..4375 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15231.3081.1prot_H-paniculata_contig15231.3081.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15231 3653..4375 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15231.3081.1

>prot_H-paniculata_contig15231.3081.1 ID=prot_H-paniculata_contig15231.3081.1|Name=mRNA_H-paniculata_contig15231.3081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp
MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISH
FISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSF
TLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNY
LTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATV
LTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYLKSN*
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mRNA from alignment at H-paniculata_contig15231:3653..4375+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15231.3081.1 ID=mRNA_H-paniculata_contig15231.3081.1|Name=mRNA_H-paniculata_contig15231.3081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=723bp|location=Sequence derived from alignment at H-paniculata_contig15231:3653..4375+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAAGACTTAAATTATCAATACACTATATTTACGAGTTAAGTTATAG ATTGACATACACCAGTATCGGAATAATACTACTTTTTAGTATAAGTTATC TATATAAACAAACTTTAATTTATTTAATAATACCTAAAGGTATTTCCCAT TTTATTAGTACAGATCTAACGGAAGTGTTTACTATATATCTACATCTTTG TACTAACATAAGCTTCATAATTGGAGCAATTATTTGTGCAATACAAATTT ATTTGTTCCTAAGACCGGGGTTGTATTTATATGAGGCAAAAAAAAGCTTT ACATTATTATTATTAACAATATGTTTTTATTTATCTATATACCTATTAGT GATCCCTGTAATTATTCAAATATCTTGGGAATTTTTTTTATCATACACTA AAAATTTTAATTCAATACAATTGATATTTGACCCACAACTTAAAAACTAT TTAACTTTTGTATATAATATTAGTATAATTATAAATATGAGTTGTCCTAT TTTACTAATATTAAATTTAATATTATCTTCTATTCAAATTAAAGCTTTAA CAAAACATCGAAGAATAATATATTTTATTGCTTTTATTTGTGCAACTGTT TTAACTCCACCAGATATAATAAGCCAAACGTTTATAGGAATATTTATAAT TGTATTTTATGAAATTCAAATTATTTTTTGGTTAACATATAAAAAATATA ATAATTATTTAAAATCAAATTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig15231:3653..4375+

>mRNA_H-paniculata_contig15231.3081.1 ID=mRNA_H-paniculata_contig15231.3081.1|Name=mRNA_H-paniculata_contig15231.3081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1446bp|location=Sequence derived from alignment at H-paniculata_contig15231:3653..4375+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAAGACTTAAATTATCAATACACTATATTTACGAGTTAAGTTATAG
ATTGACATACACCAGTATCGGAATAATACTACTTTTTAGTATAAGTTATC
TATATAAACAAACTTTAATTTATTTAATAATACCTAAAGGTATTTCCCAT
TTTATTAGTACAGATCTAACGGAAGTGTTTACTATATATCTACATCTTTG
TACTAACATAAGCTTCATAATTGGAGCAATTATTTGTGCAATACAAATTT
ATTTGTTCCTAAGACCGGGGTTGTATTTATATGAGGCAAAAAAAAGCTTT
ACATTATTATTATTAACAATATGTTTTTATTTATCTATATACCTATTAGT
GATCCCTGTAATTATTCAAATATCTTGGGAATTTTTTTTATCATACACTA
AAAATTTTAATTCAATACAATTGATATTTGACCCACAACTTAAAAACTAT
TTAACTTTTGTATATAATATTAGTATAATTATAAATATGAGTTGTCCTAT
TTTACTAATATTAAATTTAATATTATCTTCTATTCAAATTAAAGCTTTAA
CAAAACATCGAAGAATAATATATTTTATTGCTTTTATTTGTGCAACTGTT
TTAACTCCACCAGATATAATAAGCCAAACGTTTATAGGAATATTTATAAT
TGTATTTTATGAAATTCAAATTATTTTTTGGTTAACATATAAAAAATATA
ATAATTATTTAAAATCAAATTGAATGGAAAGACTTAAATTATCAATACAC
TATATTTACGAGTTAAGTTATAGATTGACATACACCAGTATCGGAATAAT
ACTACTTTTTAGTATAAGTTATCTATATAAACAAACTTTAATTTATTTAA
TAATACCTAAAGGTATTTCCCATTTTATTAGTACAGATCTAACGGAAGTG
TTTACTATATATCTACATCTTTGTACTAACATAAGCTTCATAATTGGAGC
AATTATTTGTGCAATACAAATTTATTTGTTCCTAAGACCGGGGTTGTATT
TATATGAGGCAAAAAAAAGCTTTACATTATTATTATTAACAATATGTTTT
TATTTATCTATATACCTATTAGTGATCCCTGTAATTATTCAAATATCTTG
GGAATTTTTTTTATCATACACTAAAAATTTTAATTCAATACAATTGATAT
TTGACCCACAACTTAAAAACTATTTAACTTTTGTATATAATATTAGTATA
ATTATAAATATGAGTTGTCCTATTTTACTAATATTAAATTTAATATTATC
TTCTATTCAAATTAAAGCTTTAACAAAACATCGAAGAATAATATATTTTA
TTGCTTTTATTTGTGCAACTGTTTTAACTCCACCAGATATAATAAGCCAA
ACGTTTATAGGAATATTTATAATTGTATTTTATGAAATTCAAATTATTTT
TTGGTTAACATATAAAAAATATAATAATTATTTAAAATCAAATTGA
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