mRNA_H-paniculata_contig15231.3081.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0FDI8_9PHAE (SecY-independent transporter protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDI8_9PHAE) HSP 1 Score: 338 bits (868), Expect = 2.160e-115 Identity = 170/236 (72.03%), Postives = 205/236 (86.86%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNY 708 M++ K SIHYI+EL+YRLTYT IG LLFSISY++KQTLIYL+IPKGISHFISTDLTE+FT YL+LCTNIS +IG +I IQ+YLFLRPGLY EAKKSFTL+++T+CFY+ IY+L +P+IIQ+SWEFF SYTK FN QLIFDPQLKNYL ++Y +SIIIN S P+++ LNLILS +QI LTKHR+I+YFI F AT+LTPPDIISQTF+G+FII+FYEIQII W+ YKKYNNY Sbjct: 1 MKKFKFSIHYIHELNYRLTYTGIGTALLFSISYIHKQTLIYLLIPKGISHFISTDLTEIFTTYLNLCTNISIVIGIMISVIQLYLFLRPGLYRNEAKKSFTLIIITLCFYIFIYILALPIIIQLSWEFFSSYTKTFNPTQLIFDPQLKNYLNYIYELSIIINFSYPLIITLNLILSYVQIIILTKHRKIVYFITFTTATILTPPDIISQTFVGVFIIMFYEIQIIIWMIYKKYNNY 236
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0JZS6_9PHAE (SecY-independent transporter protein n=1 Tax=Cymathaere triplicata TaxID=309354 RepID=A0A8F0JZS6_9PHAE) HSP 1 Score: 219 bits (559), Expect = 2.820e-68 Identity = 115/237 (48.52%), Postives = 163/237 (68.78%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M RLK SI+Y+ EL+YRL Y +G + LFS +Y YKQ LI++ +PKG+SHF+ST LTE+F YL LCT SF G I Q+YLFLRPGLY +EAK +F LL + FY+ IY +V P+I++I WE F +Y++NF +I L F+P+L++YL+ + ++ + +S P L++LN+I + K+R I Y AF A +TPPD++SQT IG+ +I+FYEIQI FW Y++Y L Sbjct: 1 MNRLKTSIYYLQELNYRLAYAILGTVFLFSTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCTIFSFSFGLGIALTQLYLFLRPGLYAFEAKTTFHLLTTALIFYICIYTIVFPIIVKILWELFSAYSQNFTAIDLTFEPRLQDYLSHLQQLNTALTLSFPCLILLNIIQMYTNRETWIKYRGIAYITAFFIAAFITPPDVLSQTLIGLPLIIFYEIQIKFWSLYEEYKKQL 237
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0K0R7_9PHAE (SecY-independent transporter protein n=1 Tax=Postelsia palmaeformis TaxID=105414 RepID=A0A8F0K0R7_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.610e-67 Identity = 120/237 (50.63%), Postives = 160/237 (67.51%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M RLK+SI+Y+ EL+YRLTYT G I LF +Y YKQ LI+L +PKG SHF+ST LTEVF YL LCT SF G I IQ+YLFLRPGLY +EAK +F L+ T+ FY+ Y+ + PVI++I WE F +Y+ NF +I L F+P+L++YLT + +S + +S P L+ILN++ K R I Y AF A +TPPD++SQT IGI +I+ YEIQ+ FW Y++Y L Sbjct: 1 MRRLKISIYYLQELNYRLTYTVFGTIFLFITTYTYKQELIFLFLPKGFSHFVSTGLTEVFFTYLQLCTIFSFSSGVGITLIQLYLFLRPGLYTFEAKTAFNFLVTTLLFYIYSYIFIFPVIVKILWEIFSAYSHNFTAIDLTFEPRLQDYLTHLQQLSKTLTISFPCLIILNILRIYTNRHIWVKCRGIAYIAAFSFAAFITPPDVLSQTLIGIPLIIIYEIQLKFWSLYEEYKKQL 237
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A7U1AQD2_9PHAE (SecY-independent transporter protein n=1 Tax=Laminaria rodriguezii TaxID=1740620 RepID=A0A7U1AQD2_9PHAE) HSP 1 Score: 216 bits (549), Expect = 9.190e-67 Identity = 112/237 (47.26%), Postives = 162/237 (68.35%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M +LK+SI+Y+ EL+YRL+Y +GII LFS +Y YKQ LI++ +PKG+SHF+ST LTE+F YL LCT SF G I Q YLF+RPGLY +EAK + +L+ + FY+ Y+ + P+I+++ WE F +Y++NF +I L F+P+LK+YL + ++ +S P L+ LN+I + + K+R I Y AF A +TPPD++SQT IG +IVFYEIQ+ FW Y++Y N L Sbjct: 1 MNKLKISIYYLQELNYRLSYAILGIIFLFSTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCTIFSFSFGLGIIMTQFYLFIRPGLYAFEAKITLNILITALIFYICFYVFIFPIIVKVLWELFSAYSQNFTAIDLTFEPRLKDYLFHLQQLNKAFTLSVPCLITLNIIQIYTKRQTWVKYRGIAYLAAFSIAAFITPPDVLSQTLIGFPLIVFYEIQLKFWFLYEEYKNQL 237
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: E6ZEQ8_ECTSI (Sec-independent transporter protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ8_ECTSI) HSP 1 Score: 214 bits (544), Expect = 5.240e-66 Identity = 115/237 (48.52%), Postives = 156/237 (65.82%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M+RL+LSI+YI EL+YRL Y ++G L+F +Y YKQ LI+L++PKG+SHF+S LTE+F Y+ LC +S G + A Q Y+FLRPG+Y YE+ L++ CFY IY+LV P +I++SWE FL+Y++NF I L F+P+L NYL + ++ I+ S P LL LNL + KHR I Y IAF A +TPPDIISQ +G +I F+EIQII W YK+Y L Sbjct: 1 MKRLQLSIYYIQELNYRLAYAALGTTLIFFTTYTYKQGLIFLLLPKGLSHFVSAGLTEIFFTYIQLCIILSISFGIFLIASQSYVFLRPGMYTYESSTFLKLIISAFCFYTYIYILVFPALIKVSWELFLTYSQNFTPINLTFEPRLNNYLDHIQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIIAFFIAAFITPPDIISQILVGAPLIFFFEIQIILWAFYKEYKKQL 237
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A0U1XGV1_9PHAE (SecY-independent protein translocase component tatC n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XGV1_9PHAE) HSP 1 Score: 213 bits (543), Expect = 5.780e-66 Identity = 112/237 (47.26%), Postives = 166/237 (70.04%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M+++++ I+Y+ EL+YRL Y+ IG +LLFS +Y+YKQ+LI+LI+P+G+SHFIS LTE+F Y+ LCT ISF G I+ +QIYLFLRPGL+ YE+K + LL+ I FY +YL++ P++++ WE F +Y+ NF I L F+P+L +YL + +++ I++ S P L+ LNLI + K+R I Y I F A LTPPDI+SQT + + +I F+E+QIIFW Y++Y L Sbjct: 1 MKKIRIFIYYLQELNYRLAYSVIGTLLLFSTTYIYKQSLIFLILPQGLSHFISAGLTEIFFTYMQLCTIISFSFGIILTVLQIYLFLRPGLFFYESKITLNLLIGIILFYTYLYLILFPLLVKFLWELFTTYSNNFTPIHLTFEPRLNDYLEHIQHLNKILSFSFPCLITLNLIQKYTKKILWVKYRGIAYIIVFSIAACLTPPDILSQTIVALPLIFFFELQIIFWALYQEYQKQL 237
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A089N2X8_PETFA (SecY-independent protein translocase component tatC n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N2X8_PETFA) HSP 1 Score: 212 bits (539), Expect = 2.990e-65 Identity = 115/237 (48.52%), Postives = 161/237 (67.93%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M++L LSI Y+ EL YRL Y + G ILLF I+Y YKQ LIY+I+P+G+SHFI+ LTE+F Y+ LC+ IS G I +QIYLFLRPGLY +E+K +L+ T+ FY +Y + P++I+ WE FL+Y++NF I L F+P+L +YL V +++ ++ +S P ++ LNL+ + K K+R I Y AF A +TPPDI+SQ FIG II+FYE+QIIFW YK+Y L Sbjct: 1 MKKLHLSIFYLQELKYRLLYAAAGTILLFFITYQYKQALIYIILPQGLSHFITAGLTEIFFTYMQLCSIISISFGLITAILQIYLFLRPGLYSFESKIVLNILICTLLFYTYLYTTIFPLLIKFLWELFLTYSQNFAPIHLTFEPRLNDYLEHVQHLNEVLCLSLPSIITLNLLQRYTKKKLWVKYRGIAYIAAFSLAAFITPPDILSQVFIGFPIILFYELQIIFWALYKQYQEQL 237
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0K0V4_9PHAE (SecY-independent transporter protein n=2 Tax=Agaraceae TaxID=2012474 RepID=A0A8F0K0V4_9PHAE) HSP 1 Score: 211 bits (538), Expect = 4.230e-65 Identity = 109/237 (45.99%), Postives = 162/237 (68.35%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M RL++SI+Y+ EL+YRLTY +G + LF +Y YKQ LI++ +PKG+SHF+ST LTE+F YL LCT SF G I Q+YLFLRPGLY +EA+ +F LL+ TI FY +Y+ + P+I+++ WE F +Y++NF +I L F+P+L +YL+ + ++ + +S P L+ L ++ + K+R I Y +AF A +TPPD++SQT IG+ +I+FYEIQ+ FW Y+ Y L Sbjct: 1 MNRLQISIYYLQELNYRLTYAILGTLFLFFTTYTYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCTIFSFSFGLGITLTQLYLFLRPGLYTFEARITFNLLITTIIFYSCLYIFIFPIIVKVLWELFSAYSQNFTAIDLTFEPRLHDYLSHLRQLNKALTLSFPCLIALQIVQIYTSRQTWVKYRGIAYIVAFSIAAFITPPDVLSQTLIGLPLIIFYEIQLKFWALYEGYKKQL 237
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A4D6E4S1_9PHAE (SecY-independent protein translocase component tatC n=1 Tax=Nereocystis luetkeana TaxID=117523 RepID=A0A4D6E4S1_9PHAE) HSP 1 Score: 211 bits (537), Expect = 5.990e-65 Identity = 111/237 (46.84%), Postives = 161/237 (67.93%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M+RLK+SI+Y+ EL+YRL Y G I LFSI+Y YKQ LI+L +PKG+SHF+ST LTE+F YL LC S IQ+YLFLRPGLY +EAK +F +L+ + FY+ +Y+ + P+I+++ WE F +Y++NF +I L F+P+L++YLT + +S + +S P L+ILN++ K+R I Y AF A +TPPD++SQT IGI +I+ YEIQ+ FW +++Y L Sbjct: 1 MDRLKISIYYLQELNYRLAYAIFGTIFLFSITYTYKQGLIFLFLPKGLSHFVSTGLTEIFFTYLQLCIIFSXXXXXXXXLIQLYLFLRPGLYTFEAKTTFNILISALLFYICLYVFIFPIIVKLLWEIFSAYSQNFTAIDLTFEPRLQDYLTHLKQLSKALTISFPCLIILNILQIYTSRNIWVKYRGIAYITAFSIAAFITPPDVLSQTLIGIPLIIIYEIQLNFWSLHEEYKKQL 237
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Match: A0A8F0FBK4_AKKLU (SecY-independent transporter protein n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0FBK4_AKKLU) HSP 1 Score: 211 bits (536), Expect = 8.480e-65 Identity = 114/237 (48.10%), Postives = 162/237 (68.35%), Query Frame = 1 Query: 1 MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHFISTDLTEVFTIYLHLCTNISFIIGAIICAIQIYLFLRPGLYLYEAKKSFTLLLLTICFYLSIYLLVIPVIIQISWEFFLSYTKNFNSIQLIFDPQLKNYLTFVYNISIIINMSCPILLILNLILSSIQIKALTKHRRIIYFIAFICATVLTPPDIISQTFIGIFIIVFYEIQIIFWLTYKKYNNYL 711 M+RL+ SI+Y+ EL YRL Y ++G IL+F +Y YKQ LI++ +PKG+SHF+ST LTE+F YL LC +SF + I I++YLF+RPGLY YEA+ S +LL+ TI FYL +Y LV P +++ WE F Y+K+F I L F+P+L +YL + ++ +++S P + +LN+I + +A K+R I Y I F A ++TPPDI+SQ IGI I YEIQIIFW YK+Y+ L Sbjct: 1 MKRLQFSIYYLQELKYRLAYAALGTILIFCTTYKYKQGLIFIFLPKGLSHFVSTGLTEIFFTYLQLCLTLSFGLSIGIVLIELYLFIRPGLYAYEAELSLSLLIGTILFYLCLYSLVFPTLVKTLWELFSMYSKDFTPIHLTFEPKLNDYLQHLQQLNKTLSLSFPCIFLLNIIQTYTNRRAWVKYRGIAYIIGFTVAALVTPPDILSQMLIGIPFISVYEIQIIFWSLYKEYHKQL 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15231.3081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15231.3081.1 >prot_H-paniculata_contig15231.3081.1 ID=prot_H-paniculata_contig15231.3081.1|Name=mRNA_H-paniculata_contig15231.3081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp MERLKLSIHYIYELSYRLTYTSIGIILLFSISYLYKQTLIYLIIPKGISHback to top mRNA from alignment at H-paniculata_contig15231:3653..4375+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15231.3081.1 ID=mRNA_H-paniculata_contig15231.3081.1|Name=mRNA_H-paniculata_contig15231.3081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=723bp|location=Sequence derived from alignment at H-paniculata_contig15231:3653..4375+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15231:3653..4375+ >mRNA_H-paniculata_contig15231.3081.1 ID=mRNA_H-paniculata_contig15231.3081.1|Name=mRNA_H-paniculata_contig15231.3081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1446bp|location=Sequence derived from alignment at H-paniculata_contig15231:3653..4375+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |