mRNA_H-paniculata_contig15137.3038.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15137.3038.1
Unique NamemRNA_H-paniculata_contig15137.3038.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 448 bits (1152), Expect = 3.240e-137
Identity = 287/781 (36.75%), Postives = 440/781 (56.34%), Query Frame = 2
Query:   98 EAAELAQSMTTEDYHANSVFAELADESREVGEAIASIKTIQEKAGAAASNKEELAALVDACVSVTGQVLATYRRAKSGKICMGLLIERIMKVQNVIERCGFRRRVESMVKSAEDKGEISELQALLEKLPGEMDLAGILAREGATDRKGECRDTEGTTEHGVALLCKYGKLNYFMEEEEDEEPAERAKTPLLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVVRRKELREFFHDGILWLTVNKGGKDRLAMLMQELALMVHEEVVHGTGRPPT-SDNSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTSPEHRMAVLCAGLKILR--TVNEQARWLYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRREYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGDPKAEYEFRQQLLEFERKTLGPAHPRALNTLTRLADCARATGETDAAQEWYRKAESTSFNVAFHMQDGFYQDEQEA----IESLKALAWSMMQSEEWGRA--EQILRKALDLQEVRLAPDSVKLANTLYRLGRCVREAGHV 2413
            EAA LA  + +    A S   +L +E   +     ++K I+       +N+EELAAL   C  +T   +   R  +S ++ +  L + +   +N  ERC  R +V  ++K+  DK EI+ L + +++L  ++ LAGI   EG  D   +  D     +   +L   +GKL                       A VP GAP    WH+ER   M  + + L     + V+ L G SGSGKTT A+E+VR  E+RE F DGI+WL VN+G K RL  LM +LA MVHEE+    GR P+ S++S  +I++ +E G +G  L+CLVVADN WE +V++KL ET MWVL++ RDE +V  S G+ V +   S+ D+  +L+ AAEL +E  LPD A +L++LCGR+ MD+  VGRW T+RG  D ++WSDAA TIRTE++    D  +D+ AE    + R A+L  G + L   + +E+ + LY+SLAV+PDGHAF+++DAA+LL    +D      +E +   ++  L++W+I+ +A    +  YRMH+ H+  AR  L     +RR A++ W  +LSSL+++++T+ +VL GLW  +E++ G+GW   RPY   L  M  SD +  R + EAV  F  A+ D +      ++LLE E++ LG  HP  LNT   LA  A   G  + A +W+ K E     +A    +   +   EA     +SL ++A + ++     RA  E +LR++LD++E  L P+ +++A+TL +LG   REAG +
Sbjct:   11 EAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIES-EVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDR--IDQRLESLPRSFGKL-----------------------AAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDS-AENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLL----YDRSPSTEDEASAGGVVDVLERWSIIRSA----QGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALL-RTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEK-EVEGLPLALARMNALVRSGLEADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGVSAREAGRL 754          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 1.270e-134
Identity = 281/783 (35.89%), Postives = 433/783 (55.30%), Query Frame = 2
Query:   98 EAAELAQSMTTEDYHANSVFAELADESREVGEAIASIKTIQEKAGAAASNKEELAALVDACVSVTGQVLATYRRAKSGKICMGLLIERIMKVQNVIERCGFRRRVESMVKSAEDKGEISELQALLEKLPGEMDLAGILAREGATDRKGECRDTEGTTEHGVALLCKYGKLNYFMEEE---EDEEPAERAKTPLLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVVRRKELREFFHDGILWLTVNKGGKDRLAMLMQELALMVHEEVVHGTGRPPT-SDNSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTSPEHRMAVLCAGLKILR--TVNEQARWLYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRREYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGDPKAEYEFRQQLLEFERKTLGPAHPRALNTLTRLADCARATGETDAAQEWYRKAESTSFNVAFHMQDGFYQDEQEAIE---SLKALAWSM--MQSEEWGRAEQILRKALDLQEVRLAPDSVKLANTLYRLGRCVREAGHV 2413
            E A++A  M +         A+L +E   +   + +++ I+EK      N E+L  L   C  +T   +   R   + ++ +  L + +  V+  +ER   R ++  ++K+  DKG+I +L+  L  L G++ LAGI     A+  K    D +  +    A   + GK      EE   + E    +   P  + ANVP+G P    WH+ER  + + ++  L   G   ++GLVG+SG+GKTTAAS +V    +RE F DGI+WL VN+G  D L  LM +LA MV E++    GR P+ SD+   ++++ +E G  G GL+CLVVADN WE++V+++L ET MW+L++ RDE+LV  + GEVV +   SE ++  +LR AAEL  E  LPD A +L+ELCGR+ MDL  VGRW T+RG +D +AWSDAA  +R E+D   +   +   +E +    R A+L AG + L   + +E+ + LY+SLAVLPDGHAFTV+DAA+LL    +D   G  +E ++  ++  L++W I+    R     YRMH+ HS  AR +L    D+RR A++  V  +SSLE +++   + L  LW  V+++ G+GW++ RPY   L  +D S+    R+++EAV  F  A+ D        ++LL  E   LG  HP  LNT   LA CA      + A+EW+RK            Q      E   ++   SL +LA ++  +   E G AE +LR++L+++   L  D V++A   + LG C+REAG +
Sbjct:   11 EVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYT-ELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGI-----ASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGV-TAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLL----YDREPGTEDEASVGGVVEALERWTII----RSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGVCIREAGRL 778          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 2.040e-130
Identity = 283/734 (38.56%), Postives = 408/734 (55.59%), Query Frame = 2
Query:  260 AALVDACVSVTGQVLATYRRAKSGKICMGLLIERIMKVQNVIERCGFRRRVESMVKSAEDKGEISELQALLEKLPGEMDLAGILAREGAT-DRKG--ECRDTEGTTEHGVALL---CKYGKLNYFMEEEEDEEPAERAKTPLLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVVRRKELREFFHDGILWLTVNKGGKDRLAMLMQELALMVHEEVVHGTGRPPTS-DNSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDS-GGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTSPEHRMAVLCAGLKILRTVNEQARW--LYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRREYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKT-TEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGDPKAEYEFRQQLLEFERKTLGPAHPRALNTLTRLADCARATGETDAAQEWYRKAESTSFNVAFHMQ---DGFYQDEQEAIESLKALAWSMMQ--SEEWGRAEQILRKALDLQEVRLAPDSVKLANTLYRLGRCVREAGHV 2413
            AAL   C  +TG V+   R+  SG     L+ E +  V   +ERC  R  +  ++K+ +DK EI+ L+  LE L G++ LAGI    G   D K   E  DT+    H   L      + ++    E               L  A VP G PA   WH+ER  +M+ + + L   G  R++GLVG+SGSGKTTAA+E+VR  E+RE F DGI+WL+VN G  +RL  LM  LA +V E++    GR P   D+   + R+ M+ G  G GL+CLVVADN WE  VI+KL ET MWVL++ RDE LV  + GG VV +   SE D++ +LR A+EL  E  LPD A ELVELCGR+ MD+  VGRW T+RG  D +AWSDAA  +R++++ ++  V D+    R     R AVL AG + L   ++  R   LY+SLAVLPDGHAFT +DA  LL    +D      +E +   ++ TL++W+ + T G      YRMH+ HS  AR  +     +R+ AV+ W   LSSL+V+++  +  VL GLW  V ++ GE W + RPYA  L+ MD S+P+  + SL+++  F  A+GD ++  +  +++L  +R+ LG  HP  + TL  L  CA   G  +   EW  +           MQ   D    D  +   +L ++A +M+    ++ G AE ++R +L++QEV+L  D V +A  L+ LG  V  AG +
Sbjct:   51 AALYQRCTYITGCVIVRCRKGSSGLKATPLM-ECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPE--------------TL--ATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSR--VSDNVWDIRAV--RRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALL----YDRAPCPEDEVSTEELIRTLERWSALRTEGGA----YRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLK-SLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGVSVHLAGRL 754          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 1.100e-127
Identity = 241/588 (40.99%), Postives = 355/588 (60.37%), Query Frame = 2
Query:  683 VPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVVRRKELREFFHDGILWLTVNKGGKDRLAMLMQELALMVHEEVVHGTGRPPTS-DNSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTSPEHRMAVLCAGLKILR--TVNEQARWLYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRREYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGDPKAEYEFRQQLLEFERKTLGPAHPRALNTLTRLADCARATGETDAAQEWYRKAESTSFNVAFHMQDGFYQDEQEAIES---LKALAWSMMQ----SEEWGRAEQILRKALDLQEVRLAPDSVKLANTLYRLGRCVREAGHVK 2416
            VP+G PA   W+++R  +M  ++ GL + G  R++GLVG SGSGKTT ASE VR  E++E F DGI WL+VN G K+RL+ LM +LA +V+E++    GR PTS D+   +IR+ M++G  G  L+CLVVADN WE EV++KL ET MWVL++ R+  LVT++ GEVV +   SE D++ +LR AAEL  +  +P  A +L+ELCGR+ MDL  VGRW T+RG +D  AWSDA   +R E+         +  AE T    R A+L AG + L   + +E+ + LY+SLAV PDGHAFTVRDAA+LL    +D      +E ++AV++ TL++W ++    R  +  YRMH+ HS+ AR  L     +RR AV+ WV  +S LEV+++++ +VL GLW  VE + G+GW   R Y+  L  MD       RQ++ A+     A  D +      ++LLE E+K LG  H   L +   LA CA   G+   A +W  K           +Q      + E ++    L ++A +M++    S +  +AE +LR++L++QE  L  + + +A+TLY+LG C+REAG ++
Sbjct:   36 VPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAE-TRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLL----YDREPCAEDEASVAVVVDTLERWTVL----RSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLREAGRLE 614          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 8.990e-121
Identity = 245/631 (38.83%), Postives = 362/631 (57.37%), Query Frame = 2
Query:  242 SNKEELAALVDACVSVTGQVLATYRRAKSGKICMGLLIERIMKVQNVIERCGFRRRVESMVKSAEDKGEISELQALLEKLPGEMDLAGILAREGATDRKGECRDTEGTTEHGVALLCKYGKLNYFMEEEEDEEPAERAKTPLLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVVRRKELREFFHDGILWLTVNKGGKDRLAMLMQELALMVHEEVVHGTGRPPTSDNSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTSPEHRMAVLCAGLKILRTVN--EQARWLYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRR------EYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGDPKAEYEFRQQLLEFERKTLGPAHPRALNTLTRL 2110
            +N+EEL  L   CV +T  V+   R++   ++ +  + E +     ++ERCG R ++  ++ ++ DK EI+ ++A +  L  ++ LAG+   EG T       +  GT +     +      +              +KTP  + A +P+  P    WH+ER  +M+ ++  L  VG   ++GLVG+SGSGKTTAASE+VR  E+R+ F DG++WLTVN G KDRL  LM +LA M+ EEV  G  RP TSD+   +I+  M+RG  G GL+CLVVADN WE EV+ KL ET MWVL++ RDE+LV  S GEVV +   SE+++  +LR+A+EL  E  LPD A +L+ELCGR+ MDL  VGRW T+RG  D +AWSDAA  +R E+   + +    T  E T    R AVL AG + L + +  E+ + LY+SLAVLPDG  FTV+DAA+LL    +D      +E + A ++  L++W+++ +  RG  R       Y +H+ HS  AR  L    D+RR A+  W  ++SSL+ +++   H +  LW  VEQ+ G+GW S RPY   LA M+ SDP+    S+ AV  F   + D +      ++LL+     +GP     + +L  L
Sbjct:   66 NNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDR---------LSKTPA-KLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEV--GGRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVE-TRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLL----YDRKPSAEDEASAAGVVEILERWSVLRSI-RGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLL-PTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVGPYSLSVIRSLHEL 677          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 1.480e-99
Identity = 250/749 (33.38%), Postives = 374/749 (49.93%), Query Frame = 2
Query:  245 NKEELAALVDACVSVTGQVLATYRRAKSGKICMGLLIERIMKVQNVIERCGFRRRVESMVKSAEDKGEISELQALLEKLPGEMDLAGILAREGATDRKGECRDTEGTTEHGVALLCKYGKLNYFMEEEEDEEPAERAKTPLLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVVRRKELREFFHDGILWLTVNKGGKDRLAMLMQELALMVHEEVVHGTGRPPTSDNSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTSPEHRMAVLCAGLKILR--TVNEQARWLYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTT-------AGRGPRREYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDP-----------VFCRQSLEAVVDFH-LAKGDPKA-----EYEFRQQLLEFERKTLGPAHPRALNTLTRLADCARATGETDAAQEWYRKAESTSFNVAFHMQDGFYQDEQEAIESLKALAWSMMQSEEWGRAEQILRKALDLQEVRLAPDSVKLANTLYRLGRCVREAGHV 2413
            N+EEL  L   CV +T  V+   R++   ++ +  + E +     ++ERCG R ++  ++ ++ DK +I+ ++A +  L   + LAG+   EG T       D   T E    +     ++     E   +     +KTP  +PA +P+  P    WH+ER  +++ ++  L   G   ++GLVG+SGSGKTTAASE+VR  E                   DRL  LM +LA MV+EE+  G  RP TSD+ T +I+  M RG  G GL+CL V DN WE EV+ +L E  MWVL++ RDE+LVT   GEVV +   SE+++  +LR+AAEL  E  LPD A +L+ELCGR+ MDL   GR  T+RG  D +AWS AA  +RTE+   + + G   T   T    R AV+ AG   L   + +E+ + LY+SLAVLPDG  FTV+DAA+L+    +D +    +E + A ++  L++W+ + +       A RG    Y +H+ HS  AR  L    D+ R A+  W  ++SS++ ++    H +  LW   EQ+ G+GW   RPY   LA ++ SDP                SL  +   H L  G   A       E  +  L      LG  H     TL  L+ C RA G+   A     +  +T                +EA    + L             E++L + L++ E   A D   +A+ L+ LGRC+R+AG +
Sbjct:   41 NQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTS------DLRATVERMAKIQAATQEVILANTEIITDR---LSKTPA-KPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEI--GGRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECE-GVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLI----YDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSH--YVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLD-LSGCVRAAGQFAQAXXXXXRCLAT----------------REAKLGPRGLV----------ETEELLARRLEIVEASTALDHEHVADVLFDLGRCMRQAGRM 724          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 1.120e-94
Identity = 192/459 (41.83%), Postives = 271/459 (59.04%), Query Frame = 2
Query:  647 ERAKTPLLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVVRRKELREFFHDGILWLTVNKGGKDRLAMLMQELALMVHEEVVHGTGRPPTSD--NSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTSPEHRMAVLCAGLKILR--TVNEQARWLYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRREYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGD 2011
            +R   P ++ A VP+G P    WH+ER  + + +   L      R++GLVG+SG+GKTTAA+E+VR   +RE F DGI+WLTVN G   RL  LM +LA MV E++    G  P     N+  +I++ ME G  G GL+CL VADN WE EV++ L +T M VL++ R E+LVT + G  V L   S  D+  +LR AAEL     LPD A +L++LCGR+ MDL  VGRW T+RG  D  AWSDAA  +R E+  A+++ GDD   +      R A+L AGL+ L   + +E+ + LY+SLAVLPD     V DAA+LL D    + D    EE++A +L  L++W+++ +       +Y MH+V S  AR +L    D+RR A+R WV ++SSL+ V++     L   W  VE++ GEGW    P    LA MD  +P+  ++S+ AV   H A  D
Sbjct:   89 DRLPKPPIKKAYVPQGTPTRKSWHVERH-VTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEI--AKIE-GDDIV-DGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAED----EESVARVLDVLERWSVLRSTWA---YKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLL-QESIAAVAKAHEAHED 534          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 4.630e-88
Identity = 218/680 (32.06%), Postives = 330/680 (48.53%), Query Frame = 2
Query:  161 ELADESREVGEAIASIKTIQEKAGAAASNKEELAALVDACVSVTGQVLATYRRAKSGKICMGLLIERIMKVQNVIERCGFRRRVESMVKSAEDKGEISELQALLEKLPGEMDLAGILAREGATDRKGECRDTEGTTEHGVALLCKYGKLNYFMEEEEDEEPAERAKTPLLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVV------------------RRKELREFFHDGILWLTVNKGG--KDRLAMLMQELALMVHEEVVHGTGRPPTSDNSTG---FIRRLME-RGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTSPEHRMAVLCAGLKILRTVNEQARWLYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRREYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGDPKAEYEFRQQLLEFERKTLGPAHPRALNTLTRLADCARA 2128
            EL  E   VG  + ++K I+ +  A  SN E L AL + C  VT  V+  +R+  S ++ +  L   +   ++ I RC  R       K++ D  E+  L + ++ L G++ LAGI + +   D      D +       A+L +    N              A  P+   A VP G P    WH+ R  ++  +Y  L    + +V+GLVG SGSGKTT A+ +V                  R   +RE F DG++WL V +GG   +R+  LM +LA  V E++ H  G  P +  + G   FI   +  +G      RCLVVAD+ WE +++ +L+ T MWVL T+RD  LV    G VV +   S+ ++  LLR AAEL     LP AA +++E C R+   L  VGRW T++G++D   W++A   I  E+     +     + E  S   R+A+L AG   L   N     LY+SLAV+PDG AF  ++AA+ L D   +    Q      A +++ L+QWA+VT  G      +RMH+ HS  AR  L    D+R  A+R W    S L+ +++ +   ++ LW   E + GE W   RPY + L  +  S P  C  SL+AVV+F + +   +  ++   +LL  + K     H    +TL  L  CA A
Sbjct:   75 ELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVD------DLK-------AMLAEVIAQNTMP-----------ASVPV---AAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGN----LFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPE-CIPSLKAVVEFGINECAWEVTHDVALRLLRVQ-KDAAVEHAEVRHTLESLIHCANA 721          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 4.140e-74
Identity = 217/660 (32.88%), Postives = 324/660 (49.09%), Query Frame = 2
Query:  233 AAASNKEELAALVDACVSVTGQVLATYRRAKSGKICMGLLIERIMKVQNVIERCGFRRRVESMVKSAEDKGEISELQALLEKLPGEMDLAGILAREGATDRKGECRDTEGTTEHGVALLCKYGKLNYFMEEEEDEEPAERAKTPLLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSGKTTAASEVV--RRKELREFFHDGILWLTVNK--GGKDRLAMLMQELALMVHEEVVHGTGRPPTSDNSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDA----SAWSDAALTIRTELDGA--QMDVGDDTTAERTSPEHRMAVLCAGLKILRTVNEQARWLYVSLAVLPDGHAFTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRREYRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAV-VDFHLAKGDPK----AEYEFR-----QQLLEFERKTLGPAHPRALNTLTRLADCARATGETDAAQ 2152
            AA+ NKEEL  L + C  +T QV+   + +K+  I +  L E + K++ V ER   R R+  + +   D  +I  L+  +E +   M L+G++         GE                   KL+  +        A     P L P  VP+ AP    +H+ R G++  +   L   G   +  L G SG+GKTT+A+ +V  R   +R  F DG++WL V +  G  DRL  LM  LA  +HE+V+ G    PT D+   ++R+++ + +    LRCLVVAD+ WEA V+ KL+ET MWVL+T R  ++      E V +      ++  +LR AAEL   E L DA+ +++E+CGR+ MD   VG W ++R          AW      +  ++D    QM VG+ T  +     +R+AVL AG K +   +  A+ LYV LAV P+G  F   DAA+LL            NEE     +S L++W ++ T       +YR H+ H+  AR  L    D+R  AV  W EH+S L+     E+ VL+ +WR +E++ G+GW + RPY   L +M  S+P     +  AV V  +L +G  K    AE   R     ++ LE E  TLGP   +   TL  L  C R TG    A+
Sbjct:   56 AASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVV-------NNGE-------------------KLDQIL--------ARLQPGPKLAP--VPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTGDDGVSYVRKIVSQEK----LRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPE--ERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGN-TGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLE-----------NEEVAKGPISILERWGVLRTDAS---EKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPATSYATSGAVGVVMNLYRGARKLGELAEIMKRVEPLFRRALEIEEATLGPDDIQVAVTLQELGLCMRETGRPGEAE 658          
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 1.110e-70
Identity = 229/736 (31.11%), Postives = 316/736 (42.93%), Query Frame = 2
Query:  779 RVLGLVGESGSGKTTAASEVVRRKELREFFHDGILWLTVNKGG--KDRLAMLMQELALMVHEEV--VHGTGRPPTSDNSTGFIRRLMERG--------------------------------------------------------RRGAGLRCLVVADNTWEAEVIAKLQETAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLPDAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQMDVGDDTTAERTS-------------------------------------------------------------------PEHRMAVLCAGLKILRTV--NEQARWLYVSLAVLPDGHAFTVRDAAMLLN-DGPFDSVDGQVNEEA--------------LAVILSTLDQWAIVTTAG-RGPRRE-------YRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGLWRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGDPKAEYEFRQQLLEFERKTLGPAHPRALNTLTRLADCARATGETDAAQEWYRKAESTSFNVAFHMQDGFYQDEQEAIES------------------------------------LKALAWSMMQ--SEEWGRAEQILRKALDLQEVRLAPDSVKLANTLYRLGRCVREAGHVK 2416
            RV+GLVGESG+GKT  A+E+VR  E+ E+F DG++WL VN+G   +DRL  LM+ LA +++EEV   HG G PP                                                                        R+   LRCLV  DN  EAEV+A L ET +WVL+T RD  ++   GG+ V +G   E D+  +LR A+EL  +EP P  A EL+ELCGR  +DL  VGRW T+ G++D  AW +AA +IR EL+  ++   DD      +                                                                      R A+L AG + L +V  ++ +R LY+SLAVLPDGH FTV+DAA+LL+ DG     DG V                     +L  L+   I+T +G RG RR        +RMHE HS  AR  L  C  I   AV  WV  LSSL+ V   +   L  LW  VE + G+GW   RPY   L  +D  DP+ CR  L AV  F  A+GD        ++LL  E++      P  +  +  L + A   G+ + A  W R    T  N+A  ++      E  A +S                                    L++LA ++++        AE +LR+AL+++  R  PD  ++A TL RLG CVR+AG +K
Sbjct:  331 RVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQRRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVGRWSTVCGSKDPMAWRNAADSIRAELNNLELTREDDDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXIEDGAPASVITGSEXXXXXXXXXXXXXXXXXXXXXXXHGRESQRKAILRAGFRDLVSVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGIVAAAGGRGXXXXXXXXXXXXRRVLRVLEARGILTASGGRGGRRRSASSPSSFRMHEAHSAFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPL-CRVCLVAVAKFRGAEGDWDGASLMWRRLLTVEQRA---QEPNVMYPVWELVNAAENGGKPEEAAAWRRYGRET-LNLAM-VKSTMVPPETGARDSGXXXXXXXXXXXXXXXXXXXXXXXXXPKRSADTASVLRSLALNIVRFGPSHGVEAEMMLRRALEIEVARRGPDDPQVAVTLGRLGVCVRQAGRLK 1060          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15137.3038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW8_ECTSI3.240e-13736.75NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE1.270e-13435.89NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KLK9_9PHAE2.040e-13038.56NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KYW3_9PHAE1.100e-12740.99NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZY7_ECTSI8.990e-12138.83NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KJ30_9PHAE1.480e-9933.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J759_9PHAE1.120e-9441.83NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LFN6_ECTSI4.630e-8832.06NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5JSI2_9PHAE4.140e-7432.88NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L0N2_9PHAE1.110e-7031.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15137contigH-paniculata_contig15137:51..4050 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score481.1
Seed ortholog evalue1e-132
Seed eggNOG ortholog2880.D7FZZ7
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons2
Model size3071
Cds size2475
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15137.3038.1prot_H-paniculata_contig15137.3038.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15137 583..3986 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929213.5831873-UTR-H-paniculata_contig15137:50..5821622929213.5831873-UTR-H-paniculata_contig15137:50..582Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15137 51..582 -
1691480772.8354352-UTR-H-paniculata_contig15137:50..5821691480772.8354352-UTR-H-paniculata_contig15137:50..582Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15137 51..582 -
1622929213.6281042-UTR-H-paniculata_contig15137:3986..40501622929213.6281042-UTR-H-paniculata_contig15137:3986..4050Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15137 3987..4050 -
1691480772.8765404-UTR-H-paniculata_contig15137:3986..40501691480772.8765404-UTR-H-paniculata_contig15137:3986..4050Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15137 3987..4050 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929213.598849-CDS-H-paniculata_contig15137:582..25141622929213.598849-CDS-H-paniculata_contig15137:582..2514Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15137 583..2514 -
1691480772.8580775-CDS-H-paniculata_contig15137:582..25141691480772.8580775-CDS-H-paniculata_contig15137:582..2514Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15137 583..2514 -
1622929213.6145692-CDS-H-paniculata_contig15137:3443..39861622929213.6145692-CDS-H-paniculata_contig15137:3443..3986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15137 3444..3986 -
1691480772.8682578-CDS-H-paniculata_contig15137:3443..39861691480772.8682578-CDS-H-paniculata_contig15137:3443..3986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15137 3444..3986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15137.3038.1

>prot_H-paniculata_contig15137.3038.1 ID=prot_H-paniculata_contig15137.3038.1|Name=mRNA_H-paniculata_contig15137.3038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=825bp
MPSETTIGVSSEAAELAQSMTTEDYHANSVFAELADESREVGEAIASIKT
IQEKAGAAASNKEELAALVDACVSVTGQVLATYRRAKSGKICMGLLIERI
MKVQNVIERCGFRRRVESMVKSAEDKGEISELQALLEKLPGEMDLAGILA
REGATDRKGECRDTEGTTEHGVALLCKYGKLNYFMEEEEDEEPAERAKTP
LLEPANVPEGAPALPGWHIERGGIMQDIYNGLCNVGSSRVLGLVGESGSG
KTTAASEVVRRKELREFFHDGILWLTVNKGGKDRLAMLMQELALMVHEEV
VHGTGRPPTSDNSTGFIRRLMERGRRGAGLRCLVVADNTWEAEVIAKLQE
TAMWVLITARDEKLVTDSGGEVVALGNFSEIDSLLLLREAAELRKEEPLP
DAATELVELCGRLPMDLVSVGRWGTIRGNEDASAWSDAALTIRTELDGAQ
MDVGDDTTAERTSPEHRMAVLCAGLKILRTVNEQARWLYVSLAVLPDGHA
FTVRDAAMLLNDGPFDSVDGQVNEEALAVILSTLDQWAIVTTAGRGPRRE
YRMHEVHSVAARYNLDHCADIRRLAVRNWVEHLSSLEVVKTTEVHVLMGL
WRTVEQMRGEGWSSCRPYAIPLARMDASDPVFCRQSLEAVVDFHLAKGDP
KAEYEFRQQLLEFERKTLGPAHPRALNTLTRLADCARATGETDAAQEWYR
KAESTSFNVAFHMQDGFYQDEQEAIESLKALAWSMMQSEEWGRAEQILRK
ALDLQEVRLAPDSVKLANTLYRLGRCVREAGHVKGEAEEILLRAMDILQT
KRKPDHWLATLTQEQLELCGRDAH*
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mRNA from alignment at H-paniculata_contig15137:51..4050-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15137.3038.1 ID=mRNA_H-paniculata_contig15137.3038.1|Name=mRNA_H-paniculata_contig15137.3038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4000bp|location=Sequence derived from alignment at H-paniculata_contig15137:51..4050- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGCACATCCAACGCGTGAATCGAGCAAGCTGCAGAGTGGAGTTGAAACG GACCCGTGGGAGATATGCCCTCAGAAACAACCATAGGGGTCTCATCGGAA GCAGCAGAGCTAGCGCAGAGTATGACCACGGAAGATTACCACGCGAATTC GGTCTTTGCAGAGTTGGCTGATGAGTCTCGAGAGGTTGGCGAGGCTATTG CAAGCATCAAAACCATACAGGAGAAGGCGGGGGCGGCGGCGAGCAACAAG GAAGAGCTGGCTGCTCTCGTTGATGCATGCGTTTCCGTCACGGGACAAGT ACTTGCAACGTATCGGCGTGCCAAGTCAGGGAAAATATGTATGGGGCTCC TTATTGAGCGAATTATGAAAGTGCAGAATGTGATCGAGCGCTGCGGCTTC CGTCGGCGGGTTGAGAGCATGGTCAAAAGCGCAGAAGATAAAGGTGAAAT TTCCGAGCTGCAGGCTCTTCTCGAAAAGCTGCCGGGAGAAATGGATCTAG CGGGCATCTTGGCGCGGGAGGGTGCAACCGACAGAAAAGGCGAATGCAGG GACACCGAGGGCACAACCGAGCACGGTGTGGCTCTCTTATGTAAATATGG AAAGCTGGTGAGTGGCATTGGTGACGGTGGGAGGGATAGTTGCGTTACAA CGTCGTAACGTGCACACCATACTTTCCTCTGTGCCACAAGCGAAGTCGAT TGAGTTGGCAGATCAGATCTCAAGATCTAAAATTTTCCAAAGGCTGCGAA TGAAGTCGCTGGAAAGCTGAAAGAAAGACGATTCTCATAGATCTTTCCGA GTCCTGATCTGATATTTGTTTCCGACAGAATTCTGGGTCAAAGTTGACCG TTTTTGGTCACTTTGAACCTTTGTCGCTGGACCAACGTAGGTGGCCGAAG GGCGAAGCAGCTGAACTCGCTGCTAGCTACGATTTCTTTCCGATTTTTTT CGCTATCAAAATAACAGGGGAAATTATGTCTTTTGTTTGGCTGACATCTG TTTTTGCACCGTGTGGGCTCCCACTGGATTTCGCCAAAACAATTAGGACA TAATTAAAGAAGAAAACAATCGGAGATGGTTACGTGCCTCTATAAATTCA ACCGACTATACTTATGGCACAAAAAAAGTACTGCTCAAAAGCATAAAACT ACATAGTTAATGCGCTAATAAATGGAATATCGTAAGTGTAGAACCTTATA TCTTGAATACTTTGCGGCACCACCCCACTCCTCTCCCAACAAGCGCCCAA TTTTCTTGCTGGCATTACCTGGTGCCCTTTTTTCCCCTTTACTAACCGAC CTAACTCTATAATTCGACATGAATACTATTGCGATACAAAACAATCTGTC AGCGGCGAGATGCTTCGGTCCTGCCGTGCCTGTGGGAGAGTGGTACTACT GGAAGTGCATATGTTGACAGCTGCTGAAGTAGAATCCATGACAGTGACTA TAATATAAACCCTCTGCACATATTATCCGTGACAAATGCTGAAGTCGTAG TTCTTCATCATTCCATTCCATTTCGATATGACCCAGAACTACTTCATGGA AGAGGAAGAAGACGAGGAGCCGGCCGAAAGGGCAAAAACGCCACTACTTG AACCAGCCAATGTTCCCGAAGGTGCTCCTGCTCTTCCGGGCTGGCACATT GAGCGCGGTGGCATTATGCAAGACATATACAACGGACTCTGCAACGTTGG TTCGTCGAGGGTGTTGGGGCTTGTTGGAGAAAGCGGTTCGGGCAAAACCA CAGCGGCCTCCGAGGTCGTGCGGAGAAAGGAGTTGCGAGAGTTTTTTCAC GACGGCATCCTGTGGCTCACGGTCAACAAAGGGGGGAAGGATCGTCTTGC CATGCTAATGCAAGAGCTGGCATTAATGGTGCACGAGGAAGTCGTGCATG GCACCGGTCGTCCGCCTACGTCGGACAACAGCACAGGCTTCATCAGAAGG CTGATGGAAAGAGGCCGCAGAGGTGCGGGGCTGCGGTGCCTCGTGGTGGC GGATAACACATGGGAAGCCGAGGTTATCGCAAAGTTGCAGGAAACGGCCA TGTGGGTGCTGATCACGGCCCGCGACGAAAAGTTGGTGACCGATTCGGGA GGCGAGGTAGTGGCGCTCGGTAACTTTTCCGAAATCGATTCGCTGTTGTT GCTACGCGAGGCTGCGGAATTGCGCAAAGAGGAGCCTTTGCCCGACGCCG CAACGGAGCTAGTCGAGTTATGCGGACGGTTGCCCATGGACTTGGTTTCC GTGGGGAGGTGGGGCACGATTCGTGGGAACGAAGATGCGTCTGCTTGGTC CGACGCCGCTCTCACAATCCGCACGGAGCTTGATGGCGCTCAAATGGACG TAGGAGATGACACCACCGCCGAGCGCACCAGCCCTGAGCACCGAATGGCT GTTCTTTGCGCCGGCTTGAAGATCCTCAGAACTGTGAACGAGCAAGCCCG ATGGTTGTATGTGTCGTTAGCGGTGTTGCCGGACGGGCATGCATTTACCG TGCGTGACGCCGCAATGCTGCTGAACGATGGCCCTTTTGACTCCGTAGAC GGCCAGGTAAACGAGGAAGCTCTCGCGGTGATTTTGAGCACTCTGGATCA GTGGGCTATCGTCACTACAGCCGGAAGAGGCCCGCGGCGCGAGTATCGCA TGCACGAGGTCCATTCCGTTGCCGCGAGGTATAATCTCGATCATTGTGCA GACATCAGACGCTTGGCGGTGAGGAATTGGGTGGAGCACCTTTCCTCTCT GGAAGTCGTTAAAACTACCGAGGTGCATGTGCTCATGGGGCTATGGCGTA CTGTCGAGCAAATGCGGGGTGAAGGGTGGTCTTCTTGCCGGCCTTACGCG ATACCTCTGGCGAGAATGGATGCGTCCGATCCCGTATTTTGCCGTCAAAG TCTCGAGGCGGTGGTGGATTTTCACCTTGCCAAAGGAGACCCGAAGGCTG AATACGAGTTCCGGCAACAACTCCTGGAATTTGAACGGAAGACGCTGGGC CCTGCCCACCCCCGCGCACTGAACACGCTGACGCGTTTGGCTGATTGTGC GAGAGCCACCGGAGAAACAGATGCCGCGCAGGAGTGGTACCGTAAGGCAG AATCGACTTCGTTCAACGTCGCGTTTCACATGCAAGACGGTTTTTACCAG GACGAGCAGGAGGCTATTGAGAGTCTCAAGGCACTCGCATGGAGTATGAT GCAGTCTGAAGAATGGGGCAGAGCAGAGCAGATATTGCGGAAGGCCCTTG ACCTCCAGGAGGTTAGATTGGCGCCGGACAGCGTGAAGCTGGCCAACACG CTGTATAGATTGGGTCGTTGTGTTAGAGAGGCAGGGCACGTGAAGGGGGA AGCAGAGGAAATTTTGTTGAGAGCGATGGATATCTTGCAGACGAAGCGGA AACCAGACCATTGGTTGGCCACCCTCACGCAGGAGCAGCTTGAGCTGTGC GGTCGAGATGCACACTAATAGGAGATTCCAGGTGATAGTGCTGCAGCTCA GGACTTTTTAGTGCTGTCAGAGTTGATAGCACCGTGTAATGTATCTTTAG ATCACAAGCAGTGCTGCGATCGTTCTTGGAGCCTGGATCCAAGACGGCAG GTAGTGAGAAAGGGCTACCAAGTATGAAGCGAGATAGCACATGTACTAAT AATGTATGACTTCCTCGAAGTCTGGGGTTGCGCCGTCTTACTTCGTTTTT TATGTAGGGGCGAAATACAGTGCCCTTTCCCGTTGTGCGCCCCAATTTTG AGCGTGTCTGGTTGTTTCCTGTCCGTTCCGTCTGGAAAACAGAGTAACCC GCTGGTCTCCTCATCCTTGGTACTGTAGTAAATCGTCACATTTCTTTCGC TGAGGATAGTCTGTGCTTGATATATATAATTTTTTTCACCAGCTGTGTGT GTATTTTTTTTGTTTTTTCTAACCCCCGGAAGGCTGAGGCAAAAACCTTT ACCGTTGCTTCCATACTTGAGTATTTCTACCCAAGTATGTCTACATTTCG
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Coding sequence (CDS) from alignment at H-paniculata_contig15137:51..4050-

>mRNA_H-paniculata_contig15137.3038.1 ID=mRNA_H-paniculata_contig15137.3038.1|Name=mRNA_H-paniculata_contig15137.3038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4950bp|location=Sequence derived from alignment at H-paniculata_contig15137:51..4050- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCTCAGAAACAACCATAGGGGTCTCATCGGAAGCAGCAGAGCTAGC
GCAGAGTATGACCACGGAAGATTACCACGCGAATTCGGTCTTTGCAGAGT
TGGCTGATGAGTCTCGAGAGGTTGGCGAGGCTATTGCAAGCATCAAAACC
ATACAGGAGAAGGCGGGGGCGGCGGCGAGCAACAAGGAAGAGCTGGCTGC
TCTCGTTGATGCATGCGTTTCCGTCACGGGACAAGTACTTGCAACGTATC
GGCGTGCCAAGTCAGGGAAAATATGTATGGGGCTCCTTATTGAGCGAATT
ATGAAAGTGCAGAATGTGATCGAGCGCTGCGGCTTCCGTCGGCGGGTTGA
GAGCATGGTCAAAAGCGCAGAAGATAAAGGTGAAATTTCCGAGCTGCAGG
CTCTTCTCGAAAAGCTGCCGGGAGAAATGGATCTAGCGGGCATCTTGGCG
CGGGAGGGTGCAACCGACAGAAAAGGCGAATGCAGGGACACCGAGGGCAC
AACCGAGCACGGTGTGGCTCTCTTATGTAAATATGGAAAGCTGATGCCCT
CAGAAACAACCATAGGGGTCTCATCGGAAGCAGCAGAGCTAGCGCAGAGT
ATGACCACGGAAGATTACCACGCGAATTCGGTCTTTGCAGAGTTGGCTGA
TGAGTCTCGAGAGGTTGGCGAGGCTATTGCAAGCATCAAAACCATACAGG
AGAAGGCGGGGGCGGCGGCGAGCAACAAGGAAGAGCTGGCTGCTCTCGTT
GATGCATGCGTTTCCGTCACGGGACAAGTACTTGCAACGTATCGGCGTGC
CAAGTCAGGGAAAATATGTATGGGGCTCCTTATTGAGCGAATTATGAAAG
TGCAGAATGTGATCGAGCGCTGCGGCTTCCGTCGGCGGGTTGAGAGCATG
GTCAAAAGCGCAGAAGATAAAGGTGAAATTTCCGAGCTGCAGGCTCTTCT
CGAAAAGCTGCCGGGAGAAATGGATCTAGCGGGCATCTTGGCGCGGGAGG
GTGCAACCGACAGAAAAGGCGAATGCAGGGACACCGAGGGCACAACCGAG
CACGGTGTGGCTCTCTTATGTAAATATGGAAAGCTGAACTACTTCATGGA
AGAGGAAGAAGACGAGGAGCCGGCCGAAAGGGCAAAAACGCCACTACTTG
AACCAGCCAATGTTCCCGAAGGTGCTCCTGCTCTTCCGGGCTGGCACATT
GAGCGCGGTGGCATTATGCAAGACATATACAACGGACTCTGCAACGTTGG
TTCGTCGAGGGTGTTGGGGCTTGTTGGAGAAAGCGGTTCGGGCAAAACCA
CAGCGGCCTCCGAGGTCGTGCGGAGAAAGGAGTTGCGAGAGTTTTTTCAC
GACGGCATCCTGTGGCTCACGGTCAACAAAGGGGGGAAGGATCGTCTTGC
CATGCTAATGCAAGAGCTGGCATTAATGGTGCACGAGGAAGTCGTGCATG
GCACCGGTCGTCCGCCTACGTCGGACAACAGCACAGGCTTCATCAGAAGG
CTGATGGAAAGAGGCCGCAGAGGTGCGGGGCTGCGGTGCCTCGTGGTGGC
GGATAACACATGGGAAGCCGAGGTTATCGCAAAGTTGCAGGAAACGGCCA
TGTGGGTGCTGATCACGGCCCGCGACGAAAAGTTGGTGACCGATTCGGGA
GGCGAGGTAGTGGCGCTCGGTAACTTTTCCGAAATCGATTCGCTGTTGTT
GCTACGCGAGGCTGCGGAATTGCGCAAAGAGGAGCCTTTGCCCGACGCCG
CAACGGAGCTAGTCGAGTTATGCGGACGGTTGCCCATGGACTTGGTTTCC
GTGGGGAGGTGGGGCACGATTCGTGGGAACGAAGATGCGTCTGCTTGGTC
CGACGCCGCTCTCACAATCCGCACGGAGCTTGATGGCGCTCAAATGGACG
TAGGAGATGACACCACCGCCGAGCGCACCAGCCCTGAGCACCGAATGGCT
GTTCTTTGCGCCGGCTTGAAGATCCTCAGAACTGTGAACGAGCAAGCCCG
ATGGTTGTATGTGTCGTTAGCGGTGTTGCCGGACGGGCATGCATTTACCG
TGCGTGACGCCGCAATGCTGCTGAACGATGGCCCTTTTGACTCCGTAGAC
GGCCAGGTAAACGAGGAAGCTCTCGCGGTGATTTTGAGCACTCTGGATCA
GTGGGCTATCGTCACTACAGCCGGAAGAGGCCCGCGGCGCGAGTATCGCA
TGCACGAGGTCCATTCCGTTGCCGCGAGGTATAATCTCGATCATTGTGCA
GACATCAGACGCTTGGCGGTGAGGAATTGGGTGGAGCACCTTTCCTCTCT
GGAAGTCGTTAAAACTACCGAGGTGCATGTGCTCATGGGGCTATGGCGTA
CTGTCGAGCAAATGCGGGGTGAAGGGTGGTCTTCTTGCCGGCCTTACGCG
ATACCTCTGGCGAGAATGGATGCGTCCGATCCCGTATTTTGCCGTCAAAG
TCTCGAGGCGGTGGTGGATTTTCACCTTGCCAAAGGAGACCCGAAGGCTG
AATACGAGTTCCGGCAACAACTCCTGGAATTTGAACGGAAGACGCTGGGC
CCTGCCCACCCCCGCGCACTGAACACGCTGACGCGTTTGGCTGATTGTGC
GAGAGCCACCGGAGAAACAGATGCCGCGCAGGAGTGGTACCGTAAGGCAG
AATCGACTTCGTTCAACGTCGCGTTTCACATGCAAGACGGTTTTTACCAG
GACGAGCAGGAGGCTATTGAGAGTCTCAAGGCACTCGCATGGAGTATGAT
GCAGTCTGAAGAATGGGGCAGAGCAGAGCAGATATTGCGGAAGGCCCTTG
ACCTCCAGGAGGTTAGATTGGCGCCGGACAGCGTGAAGCTGGCCAACACG
CTGTATAGATTGGGTCGTTGTGTTAGAGAGGCAGGGCACGTGAAGGGGGA
AGCAGAGGAAATTTTGTTGAGAGCGATGGATATCTTGCAGACGAAGCGGA
AACCAGACCATTGGTTGGCCACCCTCACGCAGGAGCAGCTTGAGCTGTGC
GGTCGAGATGCACACTAAAACTACTTCATGGAAGAGGAAGAAGACGAGGA
GCCGGCCGAAAGGGCAAAAACGCCACTACTTGAACCAGCCAATGTTCCCG
AAGGTGCTCCTGCTCTTCCGGGCTGGCACATTGAGCGCGGTGGCATTATG
CAAGACATATACAACGGACTCTGCAACGTTGGTTCGTCGAGGGTGTTGGG
GCTTGTTGGAGAAAGCGGTTCGGGCAAAACCACAGCGGCCTCCGAGGTCG
TGCGGAGAAAGGAGTTGCGAGAGTTTTTTCACGACGGCATCCTGTGGCTC
ACGGTCAACAAAGGGGGGAAGGATCGTCTTGCCATGCTAATGCAAGAGCT
GGCATTAATGGTGCACGAGGAAGTCGTGCATGGCACCGGTCGTCCGCCTA
CGTCGGACAACAGCACAGGCTTCATCAGAAGGCTGATGGAAAGAGGCCGC
AGAGGTGCGGGGCTGCGGTGCCTCGTGGTGGCGGATAACACATGGGAAGC
CGAGGTTATCGCAAAGTTGCAGGAAACGGCCATGTGGGTGCTGATCACGG
CCCGCGACGAAAAGTTGGTGACCGATTCGGGAGGCGAGGTAGTGGCGCTC
GGTAACTTTTCCGAAATCGATTCGCTGTTGTTGCTACGCGAGGCTGCGGA
ATTGCGCAAAGAGGAGCCTTTGCCCGACGCCGCAACGGAGCTAGTCGAGT
TATGCGGACGGTTGCCCATGGACTTGGTTTCCGTGGGGAGGTGGGGCACG
ATTCGTGGGAACGAAGATGCGTCTGCTTGGTCCGACGCCGCTCTCACAAT
CCGCACGGAGCTTGATGGCGCTCAAATGGACGTAGGAGATGACACCACCG
CCGAGCGCACCAGCCCTGAGCACCGAATGGCTGTTCTTTGCGCCGGCTTG
AAGATCCTCAGAACTGTGAACGAGCAAGCCCGATGGTTGTATGTGTCGTT
AGCGGTGTTGCCGGACGGGCATGCATTTACCGTGCGTGACGCCGCAATGC
TGCTGAACGATGGCCCTTTTGACTCCGTAGACGGCCAGGTAAACGAGGAA
GCTCTCGCGGTGATTTTGAGCACTCTGGATCAGTGGGCTATCGTCACTAC
AGCCGGAAGAGGCCCGCGGCGCGAGTATCGCATGCACGAGGTCCATTCCG
TTGCCGCGAGGTATAATCTCGATCATTGTGCAGACATCAGACGCTTGGCG
GTGAGGAATTGGGTGGAGCACCTTTCCTCTCTGGAAGTCGTTAAAACTAC
CGAGGTGCATGTGCTCATGGGGCTATGGCGTACTGTCGAGCAAATGCGGG
GTGAAGGGTGGTCTTCTTGCCGGCCTTACGCGATACCTCTGGCGAGAATG
GATGCGTCCGATCCCGTATTTTGCCGTCAAAGTCTCGAGGCGGTGGTGGA
TTTTCACCTTGCCAAAGGAGACCCGAAGGCTGAATACGAGTTCCGGCAAC
AACTCCTGGAATTTGAACGGAAGACGCTGGGCCCTGCCCACCCCCGCGCA
CTGAACACGCTGACGCGTTTGGCTGATTGTGCGAGAGCCACCGGAGAAAC
AGATGCCGCGCAGGAGTGGTACCGTAAGGCAGAATCGACTTCGTTCAACG
TCGCGTTTCACATGCAAGACGGTTTTTACCAGGACGAGCAGGAGGCTATT
GAGAGTCTCAAGGCACTCGCATGGAGTATGATGCAGTCTGAAGAATGGGG
CAGAGCAGAGCAGATATTGCGGAAGGCCCTTGACCTCCAGGAGGTTAGAT
TGGCGCCGGACAGCGTGAAGCTGGCCAACACGCTGTATAGATTGGGTCGT
TGTGTTAGAGAGGCAGGGCACGTGAAGGGGGAAGCAGAGGAAATTTTGTT
GAGAGCGATGGATATCTTGCAGACGAAGCGGAAACCAGACCATTGGTTGG
CCACCCTCACGCAGGAGCAGCTTGAGCTGTGCGGTCGAGATGCACACTAA
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