mRNA_H-paniculata_contig14938.2939.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: D7FPJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ0_ECTSI) HSP 1 Score: 141 bits (356), Expect = 1.640e-35 Identity = 77/105 (73.33%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 1469 GGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMGGGSSSNAPAESDQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQESKKSYN 1783 GGGM+A MASTMAQGFAFGTGS++AHRAVGAVMGGG SS AP E QA Q PC++DKQNFGQCLQ NNNDVTACQFVFEALQTCQ E+KKSYN Sbjct: 36 GGGMLAGMASTMAQGFAFGTGSSIAHRAVGAVMGGGGSS-APVE---QAQEQAPQAYQQPPVDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKSYN 136
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: A0A7S1XNA6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNA6_9STRA) HSP 1 Score: 106 bits (264), Expect = 8.340e-23 Identity = 64/119 (53.78%), Postives = 75/119 (63.03%), Query Frame = 2 Query: 1424 APRPAAQAPAVPQQQGGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMGG--GSSSNAPAES-DQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQESK 1771 A RP AQ PA PQQQ GGMM+ + T+AQGFAFGTGSAVAHRAVGAV GS APA +QQ Q + C +D+QNF QCL NN + ACQF F++LQ CQQ + Sbjct: 41 AARPQAQVPAQPQQQSGGMMSGLLGTVAQGFAFGTGSAVAHRAVGAVANSFSGSGEQAPAAGMEQQPQFQQQAPIQQVSQNACSVDQQNFMQCLTENNGNAQACQFFFDSLQQCQQNQQ 159
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: A0A4D9CYI4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYI4_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 4.070e-20 Identity = 67/145 (46.21%), Postives = 82/145 (56.55%), Query Frame = 2 Query: 1358 SRASTRVSSRATSIFFVRAPPPAPRPAAQAPAVPQQ--QGGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMGGGSS-SNAP----AESDQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQESK 1771 SR+S +RA R P AP P Q QGGGMM+ AST+AQGFAFGTGSAVAHRAVGA G S S AP A + Q A Q + PC +D QNF CLQ N +V AC F++E+LQ CQ++++ Sbjct: 4 SRSSRPAPARAXXXXXXRPSSVPAAPQRSAPPAPHQPQQGGGMMSGFASTIAQGFAFGTGSAVAHRAVGAAAGAFSGDSEAPHQQEAYAQQPAHQQQYAAPAQGGQGPCALDGQNFQACLQANPGNVDACTFLYESLQQCQRQAQ 148
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: A0A7S2PCQ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCQ3_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.060e-19 Identity = 56/116 (48.28%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 1421 PAPRPAAQAPAVPQQQGGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMGGGSSSNAPAESDQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQES 1768 PA RPA+ Q GGGMM+ +AST+AQG AFGTGSA+AHRAVGAV G S AE Q + Q C DKQ F +CLQ N D ++CQF+++AL+TCQ+ + Sbjct: 18 PARRPASTPAPAQQSSGGGMMSGLASTVAQGMAFGTGSAIAHRAVGAVAGSFGGSGGDAEIPAQTSQQMGYEQQPTLASACADDKQMFYECLQMNKGDQSSCQFLYDALKTCQRSN 133
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: A0A7S1UZU7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZU7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 4.620e-18 Identity = 58/126 (46.03%), Postives = 75/126 (59.52%), Query Frame = 2 Query: 1421 PAPRPAAQAPAVPQQQ-GGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMGG---GSSSNAPAESDQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQ-ESKKSYN 1783 PA +P A PAVPQQ GGG+++ + ST+AQG AFGTGSA+AHRAVGAV GG G A +Q + C DKQ F +CLQ N D +C F+++ LQTCQ+ E+ S+N Sbjct: 6 PAQKPKAAPPAVPQQSSGGGLLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGGLSGGGEGGEAAPVEQYGDSLNPGSPTQQLSGACAGDKQMFFECLQVNKGDQQSCSFLYDQLQTCQRNETSMSFN 131
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: A0A7R9VMR5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VMR5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.020e-17 Identity = 55/112 (49.11%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 1448 PAVPQQQGGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMG--GGSSSNAPAESDQQATAQPAS-----YXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQ 1762 P Q GGGMM+ + ST+AQG AFGTGSA+AHRAVGAV G GG AP D A A PA PC+ DKQ F +CLQ N D +C+F+++ LQTCQ+ Sbjct: 38 PPAQQSGGGGMMSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGGEEAP--QDSVAGAAPADAYGQQQQMQQMAGPCDQDKQMFFECLQMNKGDQESCRFLYDTLQTCQR 147
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: A0A388JVV2_CHABU (CHCH domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JVV2_CHABU) HSP 1 Score: 89.0 bits (219), Expect = 5.510e-17 Identity = 62/135 (45.93%), Postives = 82/135 (60.74%), Query Frame = 2 Query: 1379 SSRATSIFFVR--APPPAPRPAAQAP--AVPQQQGGG-MMASMASTMAQGFAFGTGSAVAHRAVGAVMG--GGSSSNAPAESDQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQ 1762 SS+ S +R APPPAPRP AQAP AVPQ+ GGG ++ + ST+AQG AFGTGSAVAHRAV AVMG GG ++ A A + A + P C + F CL+ N++D+ CQF + L +C++ Sbjct: 4 SSKGRSGGMMRRPAPPPAPRPVAQAPPPAVPQRDGGGSLLGGIGSTIAQGMAFGTGSAVAHRAVDAVMGPRGGGAAPAAAAPEPLAASSP---FGGQTVDACANQAKAFQDCLEHNDSDIGKCQFYIDMLTSCRR 135
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: H3G8I8_PHYRM (CHCH domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3G8I8_PHYRM) HSP 1 Score: 89.0 bits (219), Expect = 7.440e-17 Identity = 62/154 (40.26%), Postives = 85/154 (55.19%), Query Frame = 2 Query: 1355 SSRASTRVSSRATSIFFVRAPPPA-PRPAAQAPAVPQQ----------QGGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMGGGSS-SNAPAESDQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQESKKSY 1780 SSR + R + R RAP PA PR +A APA Q GGGMM+ + T+AQG AFGTGSA+AHRAVGAV G S S+AP E + AQ C D+++F +CL N+ND+++CQF + + CQ + + ++ Sbjct: 6 SSRPAARPAPR-------RAPAPAQPRRSAPAPARTQAAPXXXXXXXXSGGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSFSGGSDAPQEQEAAPAAQDHQTAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQMQQQSTF 152
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: A0A7S2CIA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIA8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.150e-16 Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 1469 GGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMGGGSSSNAPAESDQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQESKK 1774 GGGMM+ + T+AQG AFGTGSA+AHRAVGAV G N + QA+ QP S CE D++NF CLQ N+ DV +C F+ LQ CQ ++K+ Sbjct: 60 GGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSMMGGNEEQPAVAQASQQPQSSIQS-----CEYDQKNFYDCLQSNHGDVNSCDMYFQQLQACQAQAKQ 156
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Match: B7FUY2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUY2_PHATC) HSP 1 Score: 87.4 bits (215), Expect = 3.430e-16 Identity = 58/119 (48.74%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 1421 PAPRPAAQAPAVPQQQ---GGGMMASMASTMAQGFAFGTGSAVAHRAVGAVMG--GGSSSNAPAESDQQATAQPASYXXXXXXXPCEMDKQNFGQCLQGNNNDVTACQFVFEALQTCQQ 1762 PA PA Q VP Q GGGM++ + ST+AQG AFGTGSA+AHRAVGAV G GG + AP E + A A C DK F +CLQ N D AC F++E LQ CQQ Sbjct: 39 PATTPAPQQSTVPAPQSSGGGGMLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGEAAAP-EPNMAAGVDAAPANPSAIQGACAQDKTMFYECLQHNQGDQQACHFLYEQLQQCQQ 156 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14938.2939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14938.2939.1 >prot_H-paniculata_contig14938.2939.1 ID=prot_H-paniculata_contig14938.2939.1|Name=mRNA_H-paniculata_contig14938.2939.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp MMASMASTMAQGFAFGTGSAVAHRAVGAVMGGGSSSNAPAESDQQATAQPback to top mRNA from alignment at H-paniculata_contig14938:1591..5985- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14938.2939.1 ID=mRNA_H-paniculata_contig14938.2939.1|Name=mRNA_H-paniculata_contig14938.2939.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4395bp|location=Sequence derived from alignment at H-paniculata_contig14938:1591..5985- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14938:1591..5985- >mRNA_H-paniculata_contig14938.2939.1 ID=mRNA_H-paniculata_contig14938.2939.1|Name=mRNA_H-paniculata_contig14938.2939.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at H-paniculata_contig14938:1591..5985- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |