mRNA_H-paniculata_contig1490.2921.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: UPI000B778AD2 (uncharacterized protein LOC110722901 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B778AD2) HSP 1 Score: 90.1 bits (222), Expect = 1.930e-19 Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 1 QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKIDGE 390 QQD A H D P L E KDG ++++L+ QPAQSPDLN+ D FF ++++ +E +++ LVE + + Y +Y+ + W +++K GGN+F+ H K+ QR+G LP V++ E Sbjct: 84 QQDNARPHINIDDPEFLEEANKDG-FDMHLICQPAQSPDLNVLDLGFFRAIQAIQHQEFPESVEELVESVLTSYASYDPRIINMTWLHSMYVMEEIMKVKGGNNFKNPHKGKKRLQRLGLLPSYVEVSNE 212
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV) HSP 1 Score: 91.3 bits (225), Expect = 9.220e-19 Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 1 QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKIDGETFDTAV 408 QQD A H + + E ++GG+ +N++ QPAQSPDLNI D FF +++S + T+D L++ ++ Y YE + W L ++LK GGN+++ H KK R+G LP +V+I E + V Sbjct: 359 QQDNARPHI-QPNDAEFLEACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEISEELVNDTV 493
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: UPI00053F7236 (uncharacterized protein LOC104908485 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F7236) HSP 1 Score: 88.2 bits (217), Expect = 1.880e-18 Identity = 46/139 (33.09%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 1 QQDGAISHT-GKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKIDGETFDTAVKW 414 QQD A +H G D K + G+N+ L+ QPAQSPDLN+ D FF ++++ +++ ID L+E ++ Y+ ++ + ++ W L ++LK GGN+++ H + +R+G LPK+V+ D + D AV++ Sbjct: 129 QQDNARAHIQGNDEAFKAAAT--QNGFNIKLIQQPAQSPDLNVLDLGFFRAIQALMYQTFPKNIDELIENVQDAYDKFDPNVVKYTWLKLHWVMVEILKVKGGNNYKNPHHGKARLERLGLLPKNVQFD-QIVDEAVQY 264
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: UPI000B8A8B59 (uncharacterized protein LOC110790786 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A8B59) HSP 1 Score: 88.6 bits (218), Expect = 7.170e-18 Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 1 QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKIDGETFDTAVKW 414 QQD A H D P L E KDG ++++L+ QP QSPDLNI D FF +++S +E +++ L+E + Y Y+ + + W ++LK GGN+++ H K+ QR+G LP V++ E V + Sbjct: 304 QQDNARPHIEVDDPQFLEEAKKDG-FDMHLICQPPQSPDLNILDLSFFRAIQSIQHQEFPVSVEELIESVIKSYNNYDPNIINMTWLHSMYVMEEILKVKGGNNYKSPHKGKKRLQRLGVLPTYVEVPNELVQDTVHF 440
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: Q49KC8_PEA (Transposase n=2 Tax=Pisum sativum TaxID=3888 RepID=Q49KC8_PEA) HSP 1 Score: 88.2 bits (217), Expect = 8.090e-18 Identity = 46/128 (35.94%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 1 QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKID 384 QQD A +H D PL KDG +++ L+ QPA SPDLNI D FF++++S ++E TID L+ + +E + + R++ SL +++K G N ++I H ++ +RVG LP +K D Sbjct: 272 QQDNARTHINHDDPLFREAATKDG-FDIRLMCQPANSPDLNILDLGFFSAIQSLQYKEAPKTIDELISAVVKSFENFPSIKSNRIFVSLQLCMIEIMKEKGSNKYKIPHVNKERLERVGQLPIQIKCD 398
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: UPI00053F8527 (uncharacterized protein LOC104897330 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F8527) HSP 1 Score: 87.4 bits (215), Expect = 2.130e-17 Identity = 44/138 (31.88%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 1 QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKIDGETFDTAVKW 414 QQD A H P ++ ++G +N+ L+ QPAQSPDLN+ D FF ++++ ++ +D L+ ++ Y+ ++ L+ W L ++LK GGN+F+ H +K +R+G LP++V +D D AV + Sbjct: 369 QQDNARPHIHASDPQFIAAATQNG-FNIQLINQPAQSPDLNVLDLGFFRAIQALQYQSFPKNLDELILRVQDCYDFFDPEVLKYTWLQLQYVMVEILKCKGGNNFKNPHHAKRKLERLGLLPENVTVDQAVIDEAVTY 505
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: UPI0007EF57A6 (uncharacterized protein LOC108207264 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF57A6) HSP 1 Score: 87.0 bits (214), Expect = 2.170e-17 Identity = 43/138 (31.16%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 1 QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKIDGETFDTAVKW 414 QQD A +H + + + G+++ L+ QP+ SPDLNI D FF +++S +++E TID L++ ++ Y+AY L R++ +L ++LK G N + I H + +R G LPK ++ D + + + W Sbjct: 276 QQDNARTHLDPND-AQFCQAASQYGFDIRLMCQPSNSPDLNILDLGFFNAIQSLLYKESPKTIDELIDAVERSYQAYPPRILNRIFCTLQTCMIEILKGRGFNKYSIPHIKKNILERQGRLPKQMRCDAQLIQSVILW 412
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: UPI00053F5035 (uncharacterized protein LOC104895315 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F5035) HSP 1 Score: 84.0 bits (206), Expect = 2.720e-17 Identity = 45/137 (32.85%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 1 QQDGAISHT-GKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKIDGETFDTAV 408 QQD A H G D K + G+N+ L+ QP QSPDLN+ DF FF ++++ +++ ID L+ ++ Y+ ++ S ++ W L ++L+ GGN+++ H + +R+G LPK K D D AV Sbjct: 77 QQDNARPHIQGNDEAFKAAAT--QNGFNIMLIQQPPQSPDLNVLDFSFFRAIQALMYQTFPKNIDELITNVQDAYDRFDPSVMKYTWLQLQWIMVEILQVRGGNNYKNPHHGKARLERLGLLPKIFKFDQVIVDEAV 211
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: A0A081AGH7_PHYPR (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A081AGH7_PHYPR) HSP 1 Score: 82.8 bits (203), Expect = 4.710e-17 Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 1 QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKK-RQRVGSLPKSVKIDGETFDTA 405 Q D A H D P ++ DGGW++++ QPA SPD N+ND FFAS++S +++ TI+ LV ++ Y E ST+++V+ +L + G N +++ H ++ R G LP S+ + +D A Sbjct: 38 QHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKVFVTLQSVLQASMNVDGCNKYQLPHLSKEQLRMNNGLLPPSLTCNDNIYDKA 172
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Match: UPI00053FEDAB (uncharacterized protein LOC104888959 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FEDAB) HSP 1 Score: 84.0 bits (206), Expect = 8.260e-17 Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 1 QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASLKSRVWRERYGTIDGLVEGIKSMYEAYEASTLERVWQSLFKRYNQVLKALGGNDFEIQHTETKKRQRVGSLPKSVKIDGETFDTAV 408 QQD A H D L DG +++ LV QP QSPDLN+ D FF S++S TI+ LV+ +++ Y+AY+ T+ W +VLK GGN+++ H KK +G LP V++ E D + Sbjct: 127 QQDNARPHIKPDDEAFLQAASTDG-FDILLVYQPPQSPDLNLLDLGFFKSIQSIQHTNFPETIEELVKSVQAEYDAYDPKTINYTWLHFMYVMLEVLKVEGGNNYKNPHKGKKKLDSMGQLPTFVEVSQELVDDTI 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1490.2921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1490.2921.1 >prot_H-paniculata_contig1490.2921.1 ID=prot_H-paniculata_contig1490.2921.1|Name=mRNA_H-paniculata_contig1490.2921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp QQDGAISHTGKDTPLKLSELGKDGGWNVNLVTQPAQSPDLNINDFEFFASback to top mRNA from alignment at H-paniculata_contig1490:19452..19868- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1490.2921.1 ID=mRNA_H-paniculata_contig1490.2921.1|Name=mRNA_H-paniculata_contig1490.2921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=417bp|location=Sequence derived from alignment at H-paniculata_contig1490:19452..19868- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1490:19452..19868- >mRNA_H-paniculata_contig1490.2921.1 ID=mRNA_H-paniculata_contig1490.2921.1|Name=mRNA_H-paniculata_contig1490.2921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at H-paniculata_contig1490:19452..19868- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |