prot_H-paniculata_contig14860.2897.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14860.2897.1
Unique Nameprot_H-paniculata_contig14860.2897.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length201
Homology
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BLAST of mRNA_H-paniculata_contig14860.2897.1 vs. uniprot
Match: D7FTS5_ECTSI (Glycos_transf_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS5_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 6.240e-36
Identity = 90/166 (54.22%), Postives = 106/166 (63.86%), Query Frame = 0 
Query:    3 FVALGMTDQELVRRSKTRPTNVRTTLDAESDSMAVLVLSLATSRRVWFGGIVDGMFRYLFVLATGARELPLSPIGSTGRLFAKVAALASVAALALT---GTGRSGGIGAGVGSVLAEVEVARQGLFSALLCSPSPFLCMAGVAVLRASYSVDFCQIGVVLPPEKAA 165
            FV L + D  L RRSK+ PT V   LD ESDS+AVL LSLA S++ W GG + G+ RYLFVLAT ARELP SPIG  GR  AK+AALASVAALA +   G  R+GG G    + + E    R           SP LC  GVAVL AS+S+DF QI V+LP E+AA
Sbjct:  603 FVLLDVADGILARRSKSGPTRVGAALDVESDSIAVLFLSLAASQKAWRGGFIAGVLRYLFVLATDARELPPSPIGPAGRWVAKIAALASVAALAASVGNGALRNGGGGGDADTAVFERTGGRGWWVRGGAEGSSPLLCAVGVAVLCASFSIDFFQIWVLLPREEAA 768
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14860.2897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTS5_ECTSI6.240e-3654.22Glycos_transf_1 domain-containing protein n=2 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14860contigH-paniculata_contig14860:644..1615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14860.2897.1mRNA_H-paniculata_contig14860.2897.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14860 43..1654 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14860.2897.1 ID=prot_H-paniculata_contig14860.2897.1|Name=mRNA_H-paniculata_contig14860.2897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MSFVALGMTDQELVRRSKTRPTNVRTTLDAESDSMAVLVLSLATSRRVWF
GGIVDGMFRYLFVLATGARELPLSPIGSTGRLFAKVAALASVAALALTGT
GRSGGIGAGVGSVLAEVEVARQGLFSALLCSPSPFLCMAGVAVLRASYSV
DFCQIGVVLPPEKAAKVTTAVVAVGVVYGKTVDTKGVCDGEWHGGCASSV
*
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