prot_H-paniculata_contig1476.2843.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1476.2843.1
Unique Nameprot_H-paniculata_contig1476.2843.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length193
Homology
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BLAST of mRNA_H-paniculata_contig1476.2843.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.780e-46
Identity = 95/181 (52.49%), Postives = 117/181 (64.64%), Query Frame = 0 
Query:    1 MADQGAAFEKHFVHQQASHFFNVWLFYAFGNVPPTDLLKYIPNDAAHADALCPGCGDLRDLLNSVLLHGRRGVGGGPIPRSLSFTLDDWEPAVHTRNLVLLQLFLDSRVLLEAGLRDADDINQGMDALDVHDDPGSELIAEHREGEGYPRKKRKERRTTKQCLKPAARLEGVTLFSRLLMI 181
            MAD  AA  KHFVH QASHF  ++ FYA+GN PPTDLL+++P+DA  AD L  GC DLRDLL SVLLHGRRGV  GP+PR LSFTL+DWEPA+H RNL+LLQ+ LDSR LL A     D + +GMD + V    G   I E        +K  K++ + K   KP+  L G     R+ +I
Sbjct:    1 MADAEAAPTKHFVHTQASHFTTIFFFYAYGNTPPTDLLQHVPHDAERADILSLGCSDLRDLLYSVLLHGRRGVSCGPVPRQLSFTLNDWEPAIHARNLMLLQMILDSRGLLNAEADGVDAVVRGMDTVAVDAGSGDRSIPEAAGKSVCKKKTGKKKTSDKTATKPS--LSGAAFAQRIGVI 179
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BLAST of mRNA_H-paniculata_contig1476.2843.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.000e-29
Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 0 
Query:   30 GNVPPTDLLKYIPNDAAHADALCPGCGDLRDLLNSVLLHGRRGVGGGPIPRSLSFTLDDWEPAVHTRNLVLLQLFLDSRVLLEA 113
            GN PPTDLL++IP+DA HA+ L  GCGDLRD L SVLLHGRRGV  G +PR  SF ++DWEPA+H RNL+LLQ+FLD+R +LE+
Sbjct:   54 GNTPPTDLLQHIPHDAQHAEILSLGCGDLRDFLYSVLLHGRRGVSCGHVPRRFSFMMNDWEPAIHARNLMLLQMFLDARDILES 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1476.2843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNQ8_ECTSI1.780e-4652.49MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FXN8_ECTSI2.000e-2966.67MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027974Domain of unknown function DUF4470PFAMPF14737DUF4470coord: 29..108
e-value: 4.4E-10
score: 39.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1476contigH-paniculata_contig1476:22798..24253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1476.2843.1mRNA_H-paniculata_contig1476.2843.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1476 14629..24431 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1476.2843.1 ID=prot_H-paniculata_contig1476.2843.1|Name=mRNA_H-paniculata_contig1476.2843.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MADQGAAFEKHFVHQQASHFFNVWLFYAFGNVPPTDLLKYIPNDAAHADA
LCPGCGDLRDLLNSVLLHGRRGVGGGPIPRSLSFTLDDWEPAVHTRNLVL
LQLFLDSRVLLEAGLRDADDINQGMDALDVHDDPGSELIAEHREGEGYPR
KKRKERRTTKQCLKPAARLEGVTLFSRLLMICVEFNRTTCNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027974DUF4470