mRNA_H-paniculata_contig1471.2816.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: D8LJ61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ61_ECTSI) HSP 1 Score: 191 bits (486), Expect = 8.550e-60 Identity = 93/118 (78.81%), Postives = 106/118 (89.83%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKVG 354 VFG+PSNM+RLQ IVWPEIRLLA++RIE LG+EG E+VVLEAAVLLEAGWDD+CDELWVVQ PP +ARARLMKRN F E +AD+RI+SQPMTN+ERAARATVV+ NEGT EDLV K G Sbjct: 92 VFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAKAG 209
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A6H5KRA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA4_9PHAE) HSP 1 Score: 193 bits (490), Expect = 3.930e-59 Identity = 93/118 (78.81%), Postives = 107/118 (90.68%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKVG 354 VFG+PSNM+RLQ IVWPEIRLLA++RIE LG+EG E+VVLEAAVLLEAGWDD+CDELWVVQ PP++ARARLMKRN F E +AD+RI+SQPMTN+ERAARATVV+ NEGT EDLV K G Sbjct: 126 VFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPEVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAKAG 243
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A6B1A9Z4_9CHLR (Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B1A9Z4_9CHLR) HSP 1 Score: 121 bits (303), Expect = 3.090e-32 Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKV 351 VFGHP M RL IVWP IR LA++ ++ L G VLEAAV++EAGW D+ DE+WVV D AR RLM RNNFS E+AD+RI SQ +TN+ER A V+I N+ + + E+V Sbjct: 73 VFGHPDGMKRLTDIVWPGIRALAEAELDRLAANGTSVAVLEAAVMIEAGWQDLVDEVWVVAVSRDTARERLMARNNFSAEEADKRIDSQ-ITNDERLKHADVMISNDCSMDVAAERV 188
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A4D9CQ82_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ82_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.150e-31 Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKV 351 VF P +RL+ IVWPEIR L + + +LG+ G A V+EAAV+LEAGW+D DE+WVV A P++A+ RLM RNN S E A RRI +Q MTN+ER +A VI N GT DL ++V Sbjct: 91 VFSSPQERNRLEGIVWPEIRRLMEEDLRALGETGIHAAVVEAAVMLEAGWEDAMDEVWVVAAEPEVAKTRLMSRNNLSAEDALRRIEAQ-MTNQERIEKADRVIWNNGTVADLEKEV 206
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A6L7UXB2_9CHLR (Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7UXB2_9CHLR) HSP 1 Score: 119 bits (299), Expect = 2.140e-31 Identity = 64/117 (54.70%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKV 351 VFGHP M RL IVWP IR LA+ + L EG E VLEAAV++EAGW D+ DE+WVV D AR RLM RN+FS E+ADRRI SQ +TN+ER A V+I N+ + E +V Sbjct: 94 VFGHPDGMKRLTDIVWPGIRALAEVELARLEAEGTEIAVLEAAVMIEAGWQDLVDEVWVVAVSRDTARERLMARNSFSAEEADRRIDSQ-ITNDERLKHADVMISNDCSMEVAAARV 209
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A177PVP9_9BACT (Dephospho-CoA kinase n=1 Tax=bacterium SCGC AG-212-C10 TaxID=1799370 RepID=A0A177PVP9_9BACT) HSP 1 Score: 115 bits (287), Expect = 9.800e-30 Identity = 63/117 (53.85%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKV 351 VFG P + RL IVWP IR LA++ I SL ++G V+LEAAV+LEAGW+D+ DELWVV PD A RL RN E A RISSQ +TN+ER A+A VI N G+ E L E++ Sbjct: 73 VFGKPEELKRLTDIVWPGIRKLAEAEIASLTEQGQPLVMLEAAVMLEAGWEDLVDELWVVVVEPDHAVTRLATRNGLDEAAARARISSQ-LTNDERVAKADTVIENNGSLEALEERI 188
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A2E5LXA9_9CHLR (Dephospho-CoA kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E5LXA9_9CHLR) HSP 1 Score: 114 bits (284), Expect = 5.390e-29 Identity = 62/117 (52.99%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKV 351 VFG P ++RL IVWP IR LA + L G + +LEAAVLLEAGW DM DE+WV DIA ARL +RN E A RI SQ ++NEER A A+VVI N GTRE+L +++ Sbjct: 99 VFGKPEELTRLTDIVWPGIRALASQELSDLEVAGTKIALLEAAVLLEAGWQDMVDEVWVTTVEVDIAVARLAERNGLDETAARARIDSQ-LSNEERIAIASVVIENNGTREELADRI 214
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A6I4ZE45_9CHLR (Dephospho-CoA kinase n=4 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZE45_9CHLR) HSP 1 Score: 113 bits (283), Expect = 5.560e-29 Identity = 64/119 (53.78%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKVGG 357 VFG P M+RL IVWP IR LA + L G VLEAAVLLEAGW+DM DE+WV D A ARL +RN E A RI SQ ++NEER A A VVI N GTRE+L + + G Sbjct: 86 VFGKPEMMTRLTDIVWPGIRALASEELSQLEVAGTRIAVLEAAVLLEAGWEDMVDEIWVTTVEADGAVARLAERNGLDEAAARARIDSQ-LSNEERIAVADVVIENNGTREELADSIRG 203
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A7X3Y4B5_9CHLR (Dephospho-CoA kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3Y4B5_9CHLR) HSP 1 Score: 110 bits (276), Expect = 4.000e-28 Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKVG 354 VF P+ ++ L I WP IR LA+ I L + G + VLEAA+++EAGW DMCDELWV +A A ARL RN +EEQA +RI++Q ++NE RA A V++ N GT E+L +VG Sbjct: 75 VFSDPAELTALNEITWPRIRALAEKTISDLREGGAKIAVLEAAIMIEAGWTDMCDELWVTEASEADAIARLQSRNGLTEEQAKQRINAQ-LSNEARADEADVLLQNTGTIEELRIRVG 191
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Match: A0A2W1AGZ2_9CHLR (Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1AGZ2_9CHLR) HSP 1 Score: 110 bits (276), Expect = 5.260e-28 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 1 VFGHPSNMSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELWVVQAPPDIARARLMKRNNFSEEQADRRISSQPMTNEERAARATVVILNEGTREDLVEKV 351 VFG P M+RL IVWP I LA + + G E V+EAAVL EAGW+ + DE+WV+ PP +AR RLM RN FS E+AD+RI SQ ++N ER ARA VVI + + +++ +V Sbjct: 73 VFGEPGAMTRLTDIVWPGIAALAVEEMAAARAAGVEVAVVEAAVLFEAGWETLVDEVWVISVPPAVARQRLMDRNGFSAEEADKRIGSQ-LSNAEREARADVVISTDCSLDEVRSRV 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1471.2816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1471.2816.1 >prot_H-paniculata_contig1471.2816.1 ID=prot_H-paniculata_contig1471.2816.1|Name=mRNA_H-paniculata_contig1471.2816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp MSRLQSIVWPEIRLLAQSRIESLGQEGCEAVVLEAAVLLEAGWDDMCDELback to top mRNA from alignment at H-paniculata_contig1471:24117..25004- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1471.2816.1 ID=mRNA_H-paniculata_contig1471.2816.1|Name=mRNA_H-paniculata_contig1471.2816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=888bp|location=Sequence derived from alignment at H-paniculata_contig1471:24117..25004- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1471:24117..25004- >mRNA_H-paniculata_contig1471.2816.1 ID=mRNA_H-paniculata_contig1471.2816.1|Name=mRNA_H-paniculata_contig1471.2816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at H-paniculata_contig1471:24117..25004- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |