prot_H-paniculata_contig14673.2793.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14673.2793.1
Unique Nameprot_H-paniculata_contig14673.2793.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length161
Homology
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: D8LEZ8_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ8_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 7.550e-83
Identity = 134/161 (83.23%), Postives = 145/161 (90.06%), Query Frame = 0
Query:    1 MSSAPIQRSTTLANSIRSGENSSPLRPTHRNEG--GKGKGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKSVVRKE 159
            MS API RS+TLA SIRS ++SSPLRP HRN+G  G  KGGRGR KGSG I+QS+RAGLTFPV+RVARHLKEAKL++RVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLA VTIAEGGVLPNIHS+LLPKK   + E
Sbjct:    1 MSGAPIARSSTLAASIRSSDSSSPLRPVHRNKGKTGGNKGGRGRVKGSGSISQSLRAGLTFPVARVARHLKEAKLASRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLADVTIAEGGVLPNIHSILLPKKVAAKLE 161          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: A0A7S3UYM8_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM8_HETAK)

HSP 1 Score: 177 bits (449), Expect = 3.690e-54
Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = 0
Query:    6 IQRSTTLANSIRSGENS--SPLRPTHR-NEGGKGK-GGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKS 154
            +QR+TTLA S R+G +   SPLRP  R + GGK   GGRG+K  S    +S +AGL FPV R+ R+LK  + S RVG G+ VYLAA++EYLCAEILELAGNA RDNKK RI PRH+QLA+RNDEELNKLL GVTI++GGVLPNIH+VLLPKKS
Sbjct:    1 MQRATTLAASTRTGADDLKSPLRPKGRLSAGGKAAAGGRGKKSQS----KSSKAGLQFPVGRIGRYLKNGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTISQGGVLPNIHTVLLPKKS 149          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: H2A_PLAFA (Histone H2A n=56 Tax=Plasmodiidae TaxID=1639119 RepID=H2A_PLAFA)

HSP 1 Score: 176 bits (445), Expect = 5.950e-54
Identity = 87/121 (71.90%), Postives = 100/121 (82.64%), Query Frame = 0
Query:   37 KGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKSVVR 157
            KG  GRKK S G + S +AGL FPV R+ R+LK+ K + RVG G+ VYLAA++EYLCAEILELAGNA RDNKK RITPRHIQLA+RNDEELNK LAGVT A GGVLPNIH+VLLPKKS ++
Sbjct:    4 KGKTGRKKASKGTSNSAKAGLQFPVGRIGRYLKKGKYAKRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRITPRHIQLAVRNDEELNKFLAGVTFASGGVLPNIHNVLLPKKSQLK 124          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: A0A7S0YWC3_9CRYP (Histone H2A n=2 Tax=Cryptophyceae TaxID=3027 RepID=A0A7S0YWC3_9CRYP)

HSP 1 Score: 174 bits (442), Expect = 1.870e-53
Identity = 87/125 (69.60%), Postives = 102/125 (81.60%), Query Frame = 0
Query:   34 GKGKGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKSVVRK 158
            GKG  GRG+ KG   +++S +AGL FPV RV R+LK+ K ++R+G G+ VYLAA+MEYL AE+LELAGNA RDNKK RI PRH+QLA+RNDEELNKLL GVTIA GGVLPNIHSVLLPKKS   K
Sbjct:   10 GKGAAGRGKSKGGKAVSRSKKAGLQFPVGRVHRYLKQGKYASRIGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHVQLAVRNDEELNKLLGGVTIAAGGVLPNIHSVLLPKKSKKEK 134          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: A0A0G4EQN3_VITBC (Histone H2A n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EQN3_VITBC)

HSP 1 Score: 175 bits (443), Expect = 2.410e-53
Identity = 85/127 (66.93%), Postives = 104/127 (81.89%), Query Frame = 0
Query:   34 GKGKGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKSVVRKEA 160
            GKGKGGRG+K G   +++S +AGL FPV R+AR+LK+ + + RVG G+ VYLAA++EYLCAE+LELAGNA RD+KK RI PRH+QLAIRNDEELNK +  VTI+ GGVLPNIH+VLLPKK    KEA
Sbjct:   22 GKGKGGRGKKAGGKNVSRSAKAGLQFPVGRIARYLKQGRYAKRVGSGAPVYLAAVLEYLCAEVLELAGNAARDHKKSRIVPRHLQLAIRNDEELNKYMQNVTISMGGVLPNIHNVLLPKKGKKAKEA 148          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: A0A6V1MPN2_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MPN2_HETAK)

HSP 1 Score: 173 bits (439), Expect = 1.150e-52
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 0
Query:    6 IQRSTTLANSIRSGENS--SPLRPTHRNEGGKGKGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKS 154
            +QR+TTLA S +SG     SPLRP  R  G K             +T+S++AGL FPV+RV+R+LK+ + S +VG G+ +YLAA+MEYL AE+LELAGNA RDNKKK I PRHI LAIRNDEELNKLL GVTIA GGVLPNIHSVLLPKKS
Sbjct:    1 MQRATTLAASTKSGGTGEKSPLRPKSRVAGAK-----AXXXXKKSVTKSMKAGLQFPVARVSRYLKQGRYSKKVGVGAGIYLAAVMEYLSAEVLELAGNAARDNKKKTINPRHITLAIRNDEELNKLLGGVTIASGGVLPNIHSVLLPKKS 146          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: A0A7S4U9Z2_GUITH (Histone H2A n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U9Z2_GUITH)

HSP 1 Score: 172 bits (436), Expect = 1.480e-52
Identity = 86/121 (71.07%), Postives = 99/121 (81.82%), Query Frame = 0
Query:   34 GKGKGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKS 154
            GKG  GRG+ KG   +++S +AGL FPV RV R+LK  K + RVG G+ VYLAA++EYL AE+LELAGNA RDNKK RI PRH+QLA+RNDEELNKLL GVTIA GGVLPNIHSVLLPKKS
Sbjct:    6 GKGAAGRGKSKGGKSVSRSKKAGLQFPVGRVHRYLKNGKYATRVGAGAPVYLAAVLEYLSAEVLELAGNAARDNKKSRIIPRHVQLAVRNDEELNKLLGGVTIASGGVLPNIHSVLLPKKS 126          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: A0A0L0FI70_9EUKA (Histone H2A n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FI70_9EUKA)

HSP 1 Score: 172 bits (435), Expect = 2.100e-52
Identity = 86/121 (71.07%), Postives = 100/121 (82.64%), Query Frame = 0
Query:   34 GKGKGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKS 154
            GKGKGG+G K      T+S RAGL FPV R+ RHL++   + RVG G+ VYLAA++EYL AEILELAGNA RDNKK RI PRH+QLA+RNDEELNKLL+GVTIA+GGVLPNIH+VLLPKKS
Sbjct:    3 GKGKGGKGGKSSGKSKTRSSRAGLQFPVGRIHRHLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIHAVLLPKKS 123          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.890e-52
Identity = 85/121 (70.25%), Postives = 100/121 (82.64%), Query Frame = 0
Query:   34 GKGKGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKS 154
            GKGKGGRG KK +   T S +AGL FPV R+ R+L++ K + R+G G+ VYLAA++EYLCAEILELAGNA RDNKK RI PRHI LA++NDEELNKLL GVTIA GGVLPNIH++LLPKKS
Sbjct:    3 GKGKGGRGEKKST---TASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKS 120          
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.890e-52
Identity = 86/121 (71.07%), Postives = 100/121 (82.64%), Query Frame = 0
Query:   34 GKGKGGRGRKKGSGGITQSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELAGNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLLPKKS 154
            GKGKGGRG KK +   T S +AGL FPV R+ R+L++ K + R+G G+ VYLAA++EYLCAEILELAGNA RDNKK RI PRHI LA++NDEELNKLL GVTIA GGVLPNIH+VLLPKKS
Sbjct:    3 GKGKGGRGGKKST---TSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKS 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14673.2793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ8_ECTSI7.550e-8383.23Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S3UYM8_HETAK3.690e-5466.01Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
H2A_PLAFA5.950e-5471.90Histone H2A n=56 Tax=Plasmodiidae TaxID=1639119 Re... [more]
A0A7S0YWC3_9CRYP1.870e-5369.60Histone H2A n=2 Tax=Cryptophyceae TaxID=3027 RepID... [more]
A0A0G4EQN3_VITBC2.410e-5366.93Histone H2A n=1 Tax=Vitrella brassicaformis (strai... [more]
A0A6V1MPN2_HETAK1.150e-5263.58Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
A0A7S4U9Z2_GUITH1.480e-5271.07Histone H2A n=2 Tax=Guillardia theta TaxID=55529 R... [more]
A0A0L0FI70_9EUKA2.100e-5271.07Histone H2A n=1 Tax=Sphaeroforma arctica JP610 Tax... [more]
A0A448ZH28_9STRA2.890e-5270.25Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U2JFS4_9STRA2.890e-5271.07Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 105..119
score: 76.19
coord: 47..69
score: 51.59
coord: 91..104
score: 80.54
coord: 76..91
score: 65.77
coord: 133..151
score: 75.14
IPR002119Histone H2ASMARTSM00414h2a4coord: 36..156
e-value: 7.8E-70
score: 248.0
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 125..154
e-value: 1.0E-18
score: 66.7
IPR009072Histone-foldGENE3D1.10.20.10coord: 33..160
e-value: 1.1E-55
score: 189.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 50..153
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 40..122
e-value: 1.2E-15
score: 58.0
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 35..154
NoneNo IPR availablePANTHERPTHR23430:SF244coord: 35..154
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 55..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14673contigH-paniculata_contig14673:510..5110 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14673.2793.1mRNA_H-paniculata_contig14673.2793.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14673 182..5133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14673.2793.1 ID=prot_H-paniculata_contig14673.2793.1|Name=mRNA_H-paniculata_contig14673.2793.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp
MSSAPIQRSTTLANSIRSGENSSPLRPTHRNEGGKGKGGRGRKKGSGGIT
QSVRAGLTFPVSRVARHLKEAKLSNRVGKGSAVYLAAIMEYLCAEILELA
GNACRDNKKKRITPRHIQLAIRNDEELNKLLAGVTIAEGGVLPNIHSVLL
PKKSVVRKEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS