prot_H-paniculata_contig1453.2716.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1453.2716.1
Unique Name	prot_H-paniculata_contig1453.2716.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	217

Homology

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: D7FUV0_ECTSI (RJL, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV0_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 5.890e-122
Identity = 171/202 (84.65%), Postives = 183/202 (90.59%), Query Frame = 0

Query:    6 SARWIGTGVRRKSKGVEDLYTSRARDAPQKKLWCVRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQMNSP 207
            +ARW   G+RRKSKGV+DLYTSRAR+APQKKLWCVR+KIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNG+SVRINFWDLSGHPDFFEIRNEFYKDSQGA+LVYDVANRA+F+EL QWL EAA+FGAGG+P+AVC NKIDKRRVVSEEEG RWA DHG  YFETSA SG NV A F  LFE ALAQM  P
Sbjct:    5 TARWPSGGMRRKSKGVDDLYTSRAREAPQKKLWCVRMKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGESVRINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLVEAADFGAGGIPMAVCANKIDKRRVVSEEEGQRWAKDHGFTYFETSACSGVNVGASFSNLFEKALAQMKDP 206

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A836CR06_9STRA (RJL, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR06_9STRA)

HSP 1 Score: 308 bits (790), Expect = 2.300e-104
Identity = 144/192 (75.00%), Postives = 165/192 (85.94%), Query Frame = 0

Query:   13 GVRRKSKGVEDLYTSRARDAPQKKLWCVRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 204
            G RR+S+G++DLYT+RA +APQKK WCVR+KIISMG+L  GKSCLIKRFCEERFV+KYISTIGIDYGVKPVTV GQ VR+NFWDLSGHPDFFEIRNEFYKDSQGA+LV+DV+ R +F+EL  WL EAA FGA GMPV VC NK+DK+R V+EEEG RWA + G  YFETSANSGANV AVF +LFE A  +M
Sbjct:   15 GGRRRSRGIDDLYTTRAAEAPQKKHWCVRIKIISMGSLATGKSCLIKRFCEERFVTKYISTIGIDYGVKPVTVRGQQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVFDVSRRESFEELQDWLSEAAKFGAQGMPVVVCANKVDKKRAVTEEEGQRWARERGYPYFETSANSGANVAAVFGRLFEAAFDKM 206

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A485LT00_9STRA (Aste57867_25121 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT00_9STRA)

HSP 1 Score: 236 bits (602), Expect = 4.900e-76
Identity = 108/165 (65.45%), Postives = 133/165 (80.61%), Query Frame = 0

Query:   40 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 204
            +R+K+ISMG  GVGKSCLIKR+CEE+FVSKYISTIGIDYGVKPV +NG  VR+NFWDLSG P+F E+RNEFYKD+QGAIL++DV++R TFD L  WL+EAA +G G  P  VC NK+DK RVVSE+EGA WA+  G +YFETSA +GANV      LF+L + ++
Sbjct:   28 LRIKVISMGDGGVGKSCLIKRYCEEKFVSKYISTIGIDYGVKPVKINGTEVRVNFWDLSGQPEFLEVRNEFYKDTQGAILIFDVSSRRTFDALESWLKEAAKYGGGKFPCVVCANKMDKTRVVSEDEGAAWASAKGYEYFETSAQTGANVAEALHCLFQLVVQRV 192

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: W4GE15_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GE15_9STRA)

HSP 1 Score: 231 bits (590), Expect = 3.150e-74
Identity = 104/165 (63.03%), Postives = 131/165 (79.39%), Query Frame = 0

Query:   40 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 204
            +R+K+ISMG  GVGKSC+IKR+CEE+FV+KYISTIGIDYGVKPV +NG  VR+NFWDLSG P+F E+RNEFYKD+QG IL++DV++R TFD L  WL+EAA +G G  P  VCGNK+DK R+V E+E A WA+  G +YFETSA +GANV      LF L +A++
Sbjct:   27 LRIKVISMGDGGVGKSCVIKRYCEEKFVTKYISTIGIDYGVKPVKINGSEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILMFDVSSRRTFDGLDGWLKEAAKYGGGKFPCVVCGNKVDKLRLVKEDEAAAWASSKGYEYFETSAQTGANVAEALHHLFHLVVARV 191

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A024TXM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXM7_9STRA)

HSP 1 Score: 231 bits (589), Expect = 4.190e-74
Identity = 105/165 (63.64%), Postives = 132/165 (80.00%), Query Frame = 0

Query:   40 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 204
            +R+K+ISMG  GVGKSC+IKR+CEE+FVSKYISTIGIDYGVKPV VNG  VR+NFWDLSG P+F E+RNEFYKD+QGAIL++DV++R +F+ L  WL+EAA +G G  P  VC NK+DK R+V E+EGA WAA  G +YFETSA +GANV      LF+L + ++
Sbjct:   25 LRIKVISMGDGGVGKSCVIKRYCEEKFVSKYISTIGIDYGVKPVKVNGSEVRVNFWDLSGQPEFLEVRNEFYKDTQGAILMFDVSSRRSFEALDGWLKEAAKYGGGKFPCVVCANKVDKLRLVKEDEGAAWAAAKGYEYFETSAQTGANVAEALHHLFQLVVNRL 189

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A6G0W5R8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5R8_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.870e-74
Identity = 105/165 (63.64%), Postives = 131/165 (79.39%), Query Frame = 0

Query:   40 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 204
            +R+K+ISMG  GVGKSC IKR+CEE+FVSKYISTIGIDYGVKPV +NG  VR+NFWDLSG P+F E+RNEFYKD+QG IL++DV++R +FD L  WL+E+A +G G  P  VCGNKIDK RVV E+E A WAA  G +YFETSA +GANV+     LF+L + ++
Sbjct:   19 LRIKVISMGEGGVGKSCFIKRYCEEKFVSKYISTIGIDYGVKPVKMNGLEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILMFDVSSRRSFDALDSWLKESAKYGGGKFPCVVCGNKIDKLRVVKEDEAAAWAASKGYEYFETSAQTGANVSEALHCLFQLVVNRL 183

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A7S1CBJ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBJ8_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.040e-73
Identity = 104/168 (61.90%), Postives = 130/168 (77.38%), Query Frame = 0

Query:   40 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQMNSP 207
            +R+K++SMG  G GKSCLIKRFCE +FVS+YISTIG+D+GVKPVT+ G  V++NFWDLSGHP+FFEIRNEFY+D+QG IL YDV NRA+FD LG WL+EA+ +GA      V  NK+DK+RVVS  EG  WA + G +YFETSANSG NV  +F  LF+   A++  P
Sbjct:    9 IRIKVVSMGDGGTGKSCLIKRFCEGKFVSRYISTIGVDFGVKPVTIAGCRVKVNFWDLSGHPEFFEIRNEFYRDTQGVILTYDVTNRASFDALGDWLEEASKYGAPSFVAFVAANKVDKKRVVSTAEGRAWAEERGLQYFETSANSGQNVDDMFNTLFKTVFAKIERP 176

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A812YQF8_SYMMI (Dnajc27 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YQF8_SYMMI)

HSP 1 Score: 228 bits (582), Expect = 4.690e-73
Identity = 105/160 (65.62%), Postives = 129/160 (80.62%), Query Frame = 0

Query:   41 RVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAG--GMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFE 198
            R+KI++MG    GKSCL+KR+CEERF+SKYI+TIG+DYGVKPV ++G SVR+NFWDLSGH +FFEIRNEFYKD+QG ILVYDV+ R TF EL  WL EA  FGA   G+PV +C NK+DKRRVVSE+EG ++A      YFE SA+SGANVT +F +LF+
Sbjct:   21 RIKILTMGGGNTGKSCLVKRYCEERFISKYIATIGVDYGVKPVQIDGVSVRVNFWDLSGHQEFFEIRNEFYKDAQGIILVYDVSTRETFQELDTWLNEAKKFGANIPGIPVVLCANKVDKRRVVSEDEGRQYATSKNFSYFEASASSGANVTEMFEQLFQ 180

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A8K1CFS0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFS0_PYTOL)

HSP 1 Score: 227 bits (579), Expect = 7.370e-73
Identity = 105/164 (64.02%), Postives = 129/164 (78.66%), Query Frame = 0

Query:   41 RVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 204
            R+KIISMG  GVGKSC+IKRFCEE+FVSKYISTIGIDYGVKPVTV GQ VR+NFWDLSG P+F E+RNEFYKD+QG IL++DV +R +F+ +  WL+EAA FGAG  P  +CGNK+D+ RVVSE+E   +A   G +Y+ETSA +G N+   FM LF   + QM
Sbjct:    7 RIKIISMGESGVGKSCVIKRFCEEKFVSKYISTIGIDYGVKPVTVLGQEVRVNFWDLSGLPEFLEVRNEFYKDTQGGILMFDVTSRKSFEAVDAWLREAAKFGAGRFPCVLCGNKVDRHRVVSEDEARAYARTKGFEYYETSACTGINIADAFMSLFTQVVRQM 170

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BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A067C8I9_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C8I9_SAPPC)

HSP 1 Score: 228 bits (580), Expect = 1.010e-72
Identity = 105/167 (62.87%), Postives = 129/167 (77.25%), Query Frame = 0

Query:   31 DAPQKKLWCVRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLF 197
            DAP      +R+K+ISMG  GVGKSC+IKR+CEE+FV+KYISTIGIDYGVKPV + G  VR+NFWDLSG P+F E+RNEFYKD+QG IL++DV++R +F+ L  WL+EAA FG G  P  VCGNKIDK RVVSE+EG  WA   G +Y+ETSA +GAN+   F  LF
Sbjct:   17 DAPTSAPPVLRIKVISMGDGGVGKSCVIKRYCEEKFVAKYISTIGIDYGVKPVRIGGAEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILLFDVSSRRSFEGLDAWLKEAAKFGGGKFPCVVCGNKIDKIRVVSEDEGMAWARARGYEYYETSAQTGANIADAFHSLF 183

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FUV0_ECTSI	5.890e-122	84.65	RJL, Ras superfamily GTPase n=1 Tax=Ectocarpus sil...	[more]
A0A836CR06_9STRA	2.300e-104	75.00	RJL, ras superfamily GTPase n=1 Tax=Tribonema minu...	[more]
A0A485LT00_9STRA	4.900e-76	65.45	Aste57867_25121 protein n=1 Tax=Aphanomyces stella...	[more]
W4GE15_9STRA	3.150e-74	63.03	Uncharacterized protein n=4 Tax=Aphanomyces astaci...	[more]
A0A024TXM7_9STRA	4.190e-74	63.64	Uncharacterized protein n=2 Tax=Aphanomyces invada...	[more]
A0A6G0W5R8_9STRA	4.870e-74	63.64	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A7S1CBJ8_9STRA	1.040e-73	61.90	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A812YQF8_SYMMI	4.690e-73	65.63	Dnajc27 protein n=1 Tax=Symbiodinium microadriatic...	[more]
A0A8K1CFS0_PYTOL	7.370e-73	64.02	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A067C8I9_SAPPC	1.010e-72	62.87	Uncharacterized protein (Fragment) n=1 Tax=Saprole...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 178..200 score: 33.87 coord: 42..63 score: 40.51 coord: 83..105 score: 23.69 coord: 145..158 score: 34.36 coord: 65..81 score: 34.68
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 42..203 e-value: 1.3E-46 score: 170.8
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 44..203 e-value: 6.2E-8 score: -16.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 47..216 e-value: 7.3E-4 score: 6.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 39..203 e-value: 5.7E-15 score: 65.7
None	No IPR available	GENE3D	3.40.50.300		coord: 39..216 e-value: 2.9E-55 score: 188.7
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 40..205
None	No IPR available	PANTHER	PTHR24073:SF269	DNAJ HOMOLOG SUBFAMILY C MEMBER 27	coord: 40..205
None	No IPR available	PROSITE	PS51419	RAB	coord: 34..216 score: 23.168
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 43..199 e-value: 3.9E-42 score: 143.6
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 42..194 e-value: 5.1E-25 score: 86.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 41..211

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1453	contig	H-paniculata_contig1453:18938..23315 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1453.2716.1	mRNA_H-paniculata_contig1453.2716.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1453 18938..23315 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1453.2716.1 ID=prot_H-paniculata_contig1453.2716.1|Name=mRNA_H-paniculata_contig1453.2716.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp
MSVGSSARWIGTGVRRKSKGVEDLYTSRARDAPQKKLWCVRVKIISMGAL
GVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGH
PDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVA
VCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELA
LAQMNSPDINEKNASK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase