mRNA_H-paniculata_contig1446.2682.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI) HSP 1 Score: 339 bits (869), Expect = 1.610e-106 Identity = 190/273 (69.60%), Postives = 221/273 (80.95%), Query Frame = 3 Query: 588 LAFGKLLHHGEFARPAEFACESPEMAMLRLENDASVEAVMALIESDGWDHVTRKHGVTVVKKFMPXXXXXXXXXXXXXXXAIVDRGAAAKFACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERAANCAPVSKQEDKAKQPA*SQRVA 1406 LAFG ++ + E S EM L+ ENDASVEAV+A+IESDGW+ VT K GV VV+KF+ XXXXXXXXXXXXX IVD GAAAKFACVKA GTLDA A+++YKLFLDNERVHEYNDNC++V+DLER S DTKVSWA +PRY PFK+RDFVT VHYRTLEDGTM+V+NRPVEH AR+ +YVRAEILIATNIMR N DP+KTDF+SVTHINPGGI DS++GAKIVN LCAKAPV LL++LER+AN APV K+E A + Q+VA Sbjct: 220 LAFGNFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXR-GIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEEAAAAK---KQKVA 488
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE) HSP 1 Score: 279 bits (714), Expect = 2.450e-84 Identity = 136/177 (76.84%), Postives = 156/177 (88.14%), Query Frame = 3 Query: 846 AAAKFACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERAANCAPVSKQEDKA 1376 AAAKFACVKA GTLDA A+++YKLFLDNERVHEYNDNC++V+DLER S DTKVSWA +PRY PFK+RDFVT VHYRTLEDGTM+VVNRPVEH AR+ +YVRAEILIATNIMR N DP+KTDF+SVTHINPGGI DS++GAKIVN LCAKAPV LL++LER+AN APV ++E A Sbjct: 240 AAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPREEVAA 416
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: A0A835YQ35_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ35_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.960e-62 Identity = 102/157 (64.97%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 873 AYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERAAN 1343 A GTL A A +++ LF N+RVHEYNDNC V+DLE S +K++WA SPR+GPFK+RDFVT+V Y TL DGT+ VVNRPV HA A T YVRAEILIATN+MR N DP KTDFV+V H+NPGG+ DS +GA +VN LCA+AP+KLL +LERAAN Sbjct: 2 ARGTLAAHAEDLFALFQSNDRVHEYNDNCADVRDLEVVSQHSKITWARSPRFGPFKARDFVTVVSYTTLADGTLAVVNRPVNHAAAPATKDYVRAEILIATNMMRANAHDPRKTDFVTVAHVNPGGVADSTLGANVVNMLCAQAPLKLLQALERAAN 158
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA) HSP 1 Score: 201 bits (511), Expect = 8.710e-56 Identity = 99/233 (42.49%), Postives = 149/233 (63.95%), Query Frame = 3 Query: 654 PEMAMLRLENDASVEAVMALIESDGWDHVTRKHGVTVVKKFMPXXXXXXXXXXXXXXXAIVDRGAAAKFACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERAANCAP 1352 P +R N A+V++++A++ GW V+ + ++ ++ D AAAKF+CVKA L+A +VYKLFLDN +VHEYN++C++++D+ER S DTKV+W+ + +GPFK RDFVT+VHYR DGT++V+NRP H D ++ RAE+L+A N+MR D +KT+F +TH+NPGG+V++ +GA IVN +C++ PV + LERAA P Sbjct: 73 PTSGEVRRANQANVDSMLAVVRGAGWRQVSSTNDHNRIRVYLKSVTPGTHLETEA-----ADDVAAAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAAQSHP 300
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: A0A7S3UPT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPT8_HETAK) HSP 1 Score: 202 bits (513), Expect = 2.500e-55 Identity = 123/292 (42.12%), Postives = 168/292 (57.53%), Query Frame = 3 Query: 525 IAGGRVTIRGSGVGGVSSSNALAFGKLLHHGEFARP---AEFACESPEMAMLRLENDASVEAVMALIESD-GWDHVTRKHGVTVVKKFMPXXXXXXXXXXXXXXXAIVDRGA----------AAKFACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADA-RQTNRYVRAEILIATNIMRRNPMDP-TKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERAANCAP 1352 + GG+ ++ S G S+ LA GK E RP + + + E AML +N V+ +++ + D GW V + G+ V KKF+ D AAKFA VKA GT++A A+ +Y+LFLDN RVHEYN C +VKDL S DTKV+WA SPR+GP K+RDF T+VH R L DGT VVVNRP H A R +Y+R+E+LIA ++MR N DP KTDF +TH+N GGI ++ A ++N LCA +P+ L+ +LE+AA+ P Sbjct: 103 LGGGKNSVFAS-TGIASNQGELATGK----NEDIRPNYQPDVSLTAEEKAMLDAQNQRDVDRLLSEVTDDEGWGLVVERQGIKVWKKFLSPGRHSSLRDGESSSITAYDEQEQAALAAMEERAAKFAAVKAAGTINAPASSIYRLFLDNSRVHEYNSLCHKVKDLAYLSEDTKVTWACSPRFGPVKARDFCTVVHCRRLRDGTCVVVNRPAFHRGALRSDPQYIRSELLIAGHVMRPNRKDPENKTDFYVMTHVNLGGICETPPVAALINRLCASSPISLMKNLEKAASHQP 389
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI) HSP 1 Score: 201 bits (511), Expect = 3.100e-53 Identity = 122/334 (36.53%), Postives = 175/334 (52.40%), Query Frame = 3 Query: 495 AACGDVLRRR-----IAGGRVTIRGSGVGGVSSSNALAFGKLLHHGEFARPAEFACESPEMAMLRLENDASVEAVMALIESDGWDHVTRKHGVTVVKKFM-----------------------PXXXXXXXXXXXXXXXAIVD---------RGAAAKFACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERAANCAPVSKQEDKAKQP 1385 A C ++LRRR + G R G+GG G+ + E E +M L+L D V+ V+ ++ DGW+ V + GV V ++++ P + D + +FACVKA L VY LF DN RV EYN++CR+VKDLE S D+K++WAAS R GPFK+RDF T+VH+RTL DGT+ V++PVEH A +T+RYVR+EIL+A N MR P DP++T+F+ VTH+NPGG +++ GA +VN+LC +PV + LE AA + Q+ + + P Sbjct: 257 AGCAELLRRRGRELFLLGLRKKQNPDGLGG--------------EGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAP 576
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC) HSP 1 Score: 187 bits (475), Expect = 8.490e-53 Identity = 86/144 (59.72%), Postives = 114/144 (79.17%), Query Frame = 3 Query: 855 KFACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVN 1286 +FACVKA G +DA V+ LFLD+ RV EYN++CR+++D++ S +TKV+W+AS RYGPFK+RDF T+VHYR LEDG +VVVNR EH A ++++YVR+EIL+A NIMR +P DP KT V++THINPGG +DSK GA +VN Sbjct: 16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE) HSP 1 Score: 199 bits (506), Expect = 3.460e-52 Identity = 128/346 (36.99%), Postives = 178/346 (51.45%), Query Frame = 3 Query: 459 AENACREVAAGTAACGDVLRRR-----IAGGRVTIRGSGVGGVSSSNALAFGKLLHHGEFARPAEFACESPEMAMLRLENDASVEAVMALIESDGWDHVTRKHGVTVVKKFM-----------------------PXXXXXXXXXXXXXXXAIVDRGAAAK---------FACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERAANCAPVSKQEDKAKQP 1385 A NA V A C ++LRRR + G R G GG + L GK E E +M L+L D V+ V+ ++ DGW+ V + GV V ++++ P + D + FACVKA L VY LF DN RV EYN++CR+VKDLE S D+K++WAAS R GPFK+RDF T+VH+RTL DGT+ V++PVEH A +T+RYVR+EIL+A N MR P DP++T+F+ VTH+NPGG +++ GA +VN+LC +PV + LE AA + Q+ + + P Sbjct: 212 AANASGNVGIRIAGCAELLRRRGRELFLLGLRKRQNPDGSGG----DKLGMGK-----------EGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSADDPAPVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRAP 542
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: A0A7S2V5A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A8_9STRA) HSP 1 Score: 193 bits (490), Expect = 6.130e-52 Identity = 100/218 (45.87%), Postives = 135/218 (61.93%), Query Frame = 3 Query: 693 VEAVMALIESDGWDHVTRKHGVTVV--KKFMPXXXXXXXXXXXXXXXAIVDRGAAAKFACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERAA 1340 + V A+ S WD +T GVTV +K A+ D KFA +KA GT+DA EV+KLF+DN RV EYND+C ++KDLE P TKV+W+AS +YGPFK+RDF T+VH+ TL DGT +V+ P H A T+RYVR+E+++A + MRR+P DP KT F ++T +NPGGI S AKIVN+L + P+ + +E AA Sbjct: 168 LSTVWAVCSSGDWDQITSGEGVTVFARRKQGGARARAVSAAHGGEGGAVND-----KFAVIKAVGTIDAPIEEVHKLFVDNSRVGEYNDHCHEIKDLEWVGPRTKVTWSASGKYGPFKARDFCTLVHFATLADGTQAIVSVPFNHPQAPATSRYVRSEVIMAGHFMRRDPKDPNKTAFTTITQVNPGGIAGSAGAAKIVNSLSTQGPITFVKKVELAA 380
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN) HSP 1 Score: 182 bits (462), Expect = 1.030e-49 Identity = 87/165 (52.73%), Postives = 115/165 (69.70%), Query Frame = 3 Query: 843 GAAAKFACVKAYGTLDADAAEVYKLFLDNERVHEYNDNCRQVKDLERFSPDTKVSWAASPRYGPFKSRDFVTIVHYRTLEDGTMVVVNRPVEHADARQTNRYVRAEILIATNIMRRNPMDPTKTDFVSVTHINPGGIVDSKMGAKIVNALCAKAPVKLLISLERA 1337 G A+KF CVKA LDA A+VY LF+DN RV EYN+ C+Q++DLE + TKV+W+AS R GPFK RDFVT VHYRTL D T++VVNR +H A QT+RY+R EI++ N+M+ P DP KT F +TH+NPGG+ ++MG I+N+ A P+ + L A Sbjct: 33 GEASKFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDA 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1446.2682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1446.2682.1 >prot_H-paniculata_contig1446.2682.1 ID=prot_H-paniculata_contig1446.2682.1|Name=mRNA_H-paniculata_contig1446.2682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=453bp MARRHRSTTLLLLYFASSLHYLCVVDSKDSLLVHRSNNNIGKHAAAAAAVback to top mRNA from alignment at H-paniculata_contig1446:1961..9488- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1446.2682.1 ID=mRNA_H-paniculata_contig1446.2682.1|Name=mRNA_H-paniculata_contig1446.2682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7528bp|location=Sequence derived from alignment at H-paniculata_contig1446:1961..9488- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1446:1961..9488- >mRNA_H-paniculata_contig1446.2682.1 ID=mRNA_H-paniculata_contig1446.2682.1|Name=mRNA_H-paniculata_contig1446.2682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2718bp|location=Sequence derived from alignment at H-paniculata_contig1446:1961..9488- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |