mRNA_H-paniculata_contig14440.2670.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14440.2670.1
Unique NamemRNA_H-paniculata_contig14440.2670.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: D7G098_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G098_ECTSI)

HSP 1 Score: 996 bits (2575), Expect = 0.000e+0
Identity = 504/603 (83.58%), Postives = 532/603 (88.23%), Query Frame = 1
Query:  118 MELVAGYGSGSDDDSNKSSASDDLSLQKSNRHTPSFRAPTVNAAPNVLVSREVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYAEDTRGQTVGNLSEHSKRQGDTVISAVPDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAPQAPAAKTDFEAGTMTEEQTKFREEWLAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQSDYQGRSWMAPPAGAR-VEAEGEE-HKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKLQ 1920
            M LVAGYGS SDD ++           K+ R   +FRAP VNAAPNVLVS  +AQA+D+LMSSPLG LGLK +SK  GQIM+HNPKAEHFLAPVQGPAHPHRRDLPVPAGGR+TGTGGVIEQASLEEWSFHEQYHTFHQFGYA D+RG TVGNLSEHSKRQGDTV+SA     L R KRKK+    AGAG X      G   E +G   G    DLGD + DG+WAP+ P  KTDFEAGTMT EQTKFRE W AEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESK ARSTFHGK Q DYQGRSWMAPPAGAR VE EGE+ HKCFTPKKCIHRYTGH+KGVQAI+FFPGYGHLLLSASMDGS+KIWDVNGGRGQRRTY GHSAAVRD+QFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCA+YYPVDNNMFLCGCSDNRVVQYDAR+GSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEP+MHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQM+KKEFKGHVNAGYACRMAFSPNGKFLASGDGQGK++IWDWGSTKVYRKLQ
Sbjct:    1 MNLVAGYGS-SDDANSSDGGGGSGPASKAARPKATFRAPRVNAAPNVLVSGAMAQATDSLMSSPLGRLGLKPSSKTGGQIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDSRGDTVGNLSEHSKRQGDTVLSAEVGG-LRRNKRKKQ----AGAGXXXXXXXXG---EGKGEERGG---DLGDSDNDGVWAPEVPREKTDFEAGTMTAEQTKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKTARSTFHGKAQHDYQGRSWMAPPAGARSVEDEGEDVHKCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDIQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARNGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQ 591          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: A0A7S2Y0E0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E0_9STRA)

HSP 1 Score: 578 bits (1489), Expect = 4.210e-197
Identity = 324/638 (50.78%), Postives = 409/638 (64.11%), Query Frame = 1
Query:  118 MELVAGYGSGSDDDSNKSSASDDLSLQKSN--------RHT-----PSFRAPTVNAAPNVLVSREVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYAEDTRGQTVGNLS-----------------EHSKRQG-------DTVISAVPDSDLP-RRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAPQAPAAKTDFEAGTMTEEQTKFREEWLAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQSDYQGRSWMAPPAGARVEAEGEEHKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKL 1917
            ME +  Y SGSD     SS  ++ S +KS+        +H      P   A  +N+AP   V+  V    +A      G L ++N+ K     +V NPKA    AP  GPAHP+++++ +PA GR   TG V+E A +E+W+F +QYHTF  FGYA D +G+ VGN S                 E +K+QG       D  +SA   SD   RR+ KK             R     E+  +G   G A +  G+ +   I        +TDFE GT+TEEQ KFR+EW A Q  KH+EY+M+EDHDRRDERKISHL+PPRH+R T +  + + FHG+++ DYQGRSW+ PP G +  A    HK F PK+CIHR+TGH+KGV  I FFPG+GHLLLS SMD  IKIWDV   R  +RTY GHS  VRDV+F+ DG QF             TETGQ + TFTNRK+PYC RYYPVD N+FL G S N+VVQ+DAR  +EIVQEYNHHLGPVNTVLF +DN+RFVSTSDDKK+LIWEYNIPVPIKYI+EP MHSMP TTLHP+G FF GQS++N+I  + ARD+F+ MRKK FKGHVNAGYA R++FSPNGK++  GD +GK F+WDWGS ++Y+K 
Sbjct:    1 MEHLLAYNSGSD-----SSEGEEGSQEKSSPVADDNELKHIGPPLKPQILAKPINSAP--AVNAFVGSGFEA------GTLVVQNSQK-----LVINPKAAAITAPTYGPAHPYKQEMALPAHGREMPTG-VLEPAGVEDWAFQQQYHTFANFGYAHDDQGKVVGNESGPWRVHSALQAAVKGKKEDTKKQGGGEEVLPDAQMSAFTGSDKQLRRQLKKRRKRERALQEIKKRAREAAEDHGDGEEGGGASEAKGEGKT--IEEELYGGPQTDFEKGTITEEQLKFRQEWEAAQKLKHKEYDMDEDHDRRDERKISHLMPPRHDRHTTAPDSSTKFHGRQEVDYQGRSWVKPPRGHK--AGDGTHKAFPPKRCIHRWTGHTKGVNHIEFFPGHGHLLLSCSMDAKIKIWDVLEDRQVKRTYQGHSMGVRDVRFNADGSQFXXXXXXXXXXXXXTETGQVLGTFTNRKVPYCVRYYPVDENIFLVGSSCNKVVQWDAR-ANEIVQEYNHHLGPVNTVLFAEDNRRFVSTSDDKKILIWEYNIPVPIKYISEPSMHSMPTTTLHPSGNFFAGQSMNNEIHVYAARDRFKFMRKKLFKGHVNAGYANRISFSPNGKYICCGDAEGKFFVWDWGSRRIYKKF 614          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: A0A836CBI0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI0_9STRA)

HSP 1 Score: 550 bits (1418), Expect = 5.640e-187
Identity = 307/603 (50.91%), Postives = 375/603 (62.19%), Query Frame = 1
Query:  118 MELVAGYGSGSDDDSNKSSASDDLSLQKSNRHTPSFRAPTVNAAPNVLVSREVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHPHRRD-LPVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYAEDTRGQTVGNLSEHSKRQGDTVISAVPDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAPQAPAAKT--DFEAGTMTEEQTKFREEWLAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQSDYQGRSWMAPPAGARVEAEGEEHKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKL 1917
            M+L+ GY SGS  D + S A ++  +   N   P  +   V AAP V+ + E A++    +S+  G +G   T++  GQ+M++NPKA+  LAPV GPAHP R   + VP GG  TG G V+E+AS+E+WSF EQYHTF Q  Y     G  VG++++     G  V  A P    P+R+             X     T                D+GD    GIWAPQ    +   D EAGTMTE Q  FRE +LAE+AKK REYNMEEDHDRRDERK+ HLLPPRH+RDT +  A++TFHGKK++DY+G+SW+ PP G R      +H+ F PKKCIHR+TGH+KGVQAI FFPG+GHL+LS SMDG  K+WDV G R  RRTY GHSAAVRDV+FSNDG++FLSAGYDRF+R WDTETGQC+ TFTNRKMPY   +YP                                                             EY IPVPIKYI+EP MHSMPA  LHP+G ++VGQSLDN+I+ W ARDKFRQ RKK FKGH NAGYACRM FSPNGK+LASGDG+G+LF+WDWGSTKVYRKL
Sbjct:    1 MDLLQGYASGSGADESGSEAQEEQPMVSVNLK-PQLQTRAVVAAPTVIRAPEHAKSVVNPLSAAAGPVGQLQTARAPGQMMMYNPKADLLLAPVLGPAHPFRASKMEVPVGGSHTGAG-VVERASIEDWSFQEQYHTFQQHKYTIGVSGDMVGDVAK-----GLAVEQAGP----PQREXXXXXXXXXXXXXXXXTGIT----------------DVGDEVTTGIWAPQEDETRVVPDAEAGTMTEAQAAFREAYLAEKAKKQREYNMEEDHDRRDERKMGHLLPPRHDRDTTAAEAKTTFHGKKEADYKGKSWVEPPGGHRAGVG--DHQAFPPKKCIHRWTGHTKGVQAIEFFPGFGHLILSGSMDGKCKVWDVLGDRQARRTYSGHSAAVRDVKFSNDGRRFLSAGYDRFVRLWDTETGQCVRTFTNRKMPYTVTFYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXEYGIPVPIKYISEPHMHSMPAVALHPSGNYWVGQSLDNQILAWGARDKFRQNRKKIFKGHTNAGYACRMDFSPNGKYLASGDGEGRLFVWDWGSTKVYRKL 573          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: W7TQP6_9STRA (Pre-mrna-processing factor 17 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP6_9STRA)

HSP 1 Score: 527 bits (1357), Expect = 1.070e-177
Identity = 282/527 (53.51%), Postives = 353/527 (66.98%), Query Frame = 1
Query:  367 NPKAEHFLAPVQGPAHPHRRDLPVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYA-EDTRGQTVGNLSEHSKRQG------DTVISAVPDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAP-QAPAAKTDFEAGTMTEEQTKFREEWLAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQSDYQGRSWMAPPAGAR-VEAEGEEHKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKLQ 1920
            N KA   LAP+QGP HP RR++    GG    TGG  E A +E+W+FHEQ+HTFH  GYA +D  G  +GN+  + +++G       T I+A           +   P G+ A    SR    G EE E         DLG+ E DG WAP +     T  EAGT+TEEQ + R E    +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT +    + FHGK +SDYQGRSW+ PP G R VE +   H C+ PK+C+HRYTGH KGVQAI FFPG GHLLLSAS+DG+ K+W V   R  RRTY GH+AAVR + FS DG +FLS G+DRF+R WDTETGQCI+T TNRK+PY A++YP ++N+F+   SDNR+  YD   G E+VQEYNHHL  VNTV F D+N RF STSDDKK+L+WE++I VPIKYIAEP MHSMPA T  P G F   QSLDN I  +  RD+F+ + KK FKGH  AG+AC+ AFSPN ++LASGDG+GKL  WD+ +T+   K +
Sbjct:   78 NVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAG----------RVTKPSGSTALEPVSRRKRKGVEEDE---------DLGEEE-DGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETD---HACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSG-EMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYR 579          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: K8Z4U6_NANGC (Pre-mRNA-processing factor 17 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4U6_NANGC)

HSP 1 Score: 527 bits (1357), Expect = 2.970e-175
Identity = 282/527 (53.51%), Postives = 353/527 (66.98%), Query Frame = 1
Query:  367 NPKAEHFLAPVQGPAHPHRRDLPVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYA-EDTRGQTVGNLSEHSKRQ------GDTVISAVPDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAP-QAPAAKTDFEAGTMTEEQTKFREEWLAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQSDYQGRSWMAPPAGAR-VEAEGEEHKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKLQ 1920
            N KA   LAP+QGP HP RR++    GG    TGG  E A +E+W+FHEQ+HTFH  GYA +D  G  +GN+  + +++      G T I+A           +   P G+ A    SR    G EE E         DLG+ E DG WAP +     T  EAGT+TEEQ + R E    +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT +    + FHGK +SDYQGRSW+ PP G R VE +   H C+ PK+C+HRYTGH KGVQAI FFPG GHLLLSAS+DG+ K+W V   R  RRTY GH+AAVR + FS DG +FLS G+DRF+R WDTETGQCI+T TNRK+PY A++YP ++N+F+   SDNR+  YD   G E+VQEYNHHL  VNTV F D+N RF STSDDKK+L+WE++I VPIKYIAEP MHSMPA T  P G F   QSLDN I  +  RD+F+ + KK FKGH  AG+AC+ AFSPN ++LASGDG+GKL  WD+ +T+   K +
Sbjct:   78 NVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKECLRDPAGPTAINAG----------RVTKPSGSTALEPVSRRKRKGVEEDE---------DLGEEE-DGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETD---HACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSG-EMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYR 579          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: K3WD12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD12_GLOUD)

HSP 1 Score: 499 bits (1285), Expect = 5.300e-167
Identity = 271/571 (47.46%), Postives = 374/571 (65.50%), Query Frame = 1
Query:  232 PTVNAAPNVLVSR-EVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHPHRRDL---PVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYAEDTRGQTVGNLSEHSKRQGDTVISAVPDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAP-QAPAAKTDFEAGTMTEEQTKFREEWLA---EQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQSDYQGRSWMAPPAGARVEAEGEEHKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKLQ 1920
            P +N+AP V+V+  E+A+++   +++               Q+ V+ P  E  LAP  GPA+ + R+    P   G       G++E+ ++E+++F  QYHT++Q         ++    S+ S    D ++S   ++    R  KK             +  T  +E+A       A ++ GD   DGIWAP    +  TD EAGTMT EQ   R+  +A   ++A++  +++ E D DR  E+K++HLLP R     E+  A++ F   ++ DYQGRSW+ PP G R + EG +H+ F PK+C+H++TGH+KGVQAI  FP YGHLLLS SMD +++IWDV   +  +R Y GHS AVR + FSNDGKQFLS G+DRFI+ WDTETGQ I +FTNR++PYC ++YP DNN F+ G S+N +VQ+DAR G EIVQEYNHHL  VN+V FVDDN+RFVSTSDDKK+LIWE+ IPVP+KYI+EP MHSMPA TLHP+G FF GQSL+N+I  +TARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGD +G+L  WDW STK+Y+KL+
Sbjct:   35 PVINSAPLVVVANPEIARSTSQFLAAA-----------SQKQLSVNLP-VESTLAPYVGPANAYARNAQLDPAYVGSGKEIVTGIVEKTNMEDFNFDAQYHTYNQSHTGMYLNKRSAPETSQTS----DAIVSHNEENVFTTRNVKKR------------KNHTVAKEKA-------AAEEFGDDSVDGIWAPYMEKSVVTDAEAGTMTAEQEAIRDAHIAAKKQKAERSTQFDEEMDFDRMIEKKMAHLLPARLKAGQEAMVAKTQFLDTQEYDYQGRSWIEPPRGLRPD-EGGDHQVFLPKRCVHKWTGHTKGVQAIELFPSYGHLLLSGSMDHTVRIWDVYNEKKCKRVYEGHSGAVRGINFSNDGKQFLSCGFDRFIQLWDTETGQSIKSFTNRRVPYCVKFYPGDNNNFVIGDSNNMIVQFDARSG-EIVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPVKYISEPSMHSMPAVTLHPSGAFFAGQSLNNQIDVYTARDKFKLQRKKVFKGHSNAGYACQIGFSPNGQYIMSGDAEGRLCFWDWKSTKMYKKLR 568          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: A0A5D6XJI7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI7_9STRA)

HSP 1 Score: 491 bits (1265), Expect = 4.480e-164
Identity = 293/609 (48.11%), Postives = 380/609 (62.40%), Query Frame = 1
Query:  118 MELVAGYGSGSDDDSNKSSASDDLSLQKSNRHTPSFRAPTVNAAPNVLVSREVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHPHRR--DLPVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQ-FGYAEDTRGQTVGNLSEHSKRQGDTVISAVPDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAPQAP-AAKTDFEAGTMTEEQTKFREEWLA---EQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQS-DYQGRSWMAPPAGARVEAEGEEHKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKLQ 1920
            MEL+A Y S SDD+S+ ++ +          H      P+VN+AP+V  +      + +L S+    L L    K   Q+ V+ P A   LAPV GP     R  D      GR   TG V+E ASL++ SF  QYHT++Q  G A   R    G     ++   D +++   DS    R  KK             R A    E+A       A + LGD   DG+WAP A  +  T  EAGTMT EQ   RE  L    ++A++  + + E D DR  E+K +HLLP R     E+  A S F    Q  DYQGR+W+ PP G + + +GE H+ F PK+C+H++ GH+KGVQAI  FP +GHLLLS S+D +++IWDV   R  +R Y GHS AVR + FSNDG+QFLSAG+DRFI+ WDTETGQ I  FTNR++PYC ++ P DN+ F+ G S+N VVQ+DAR G E+VQEYNHHL  VN+V FVDDN+RFVSTSDDKK+LIWE+ IPVPIKYI+EP MHSMPA TLHP+GGFF GQSL+N+I  + ARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGD  G+L  WDW STK+Y+KL+
Sbjct:    1 MELLAHYASSSDDESDSAALA----------HDTIAPLPSVNSAPSVSFT------ASSLSSTSSAALALVAAGK---QLSVNLPVAA-TLAPVLGPHAGTGRSSDALTRGTGREIVTG-VVENASLDDLSFDAQYHTYNQRHGGARLNRRAVSG-----AEAPTDAIVALEADSVFTARNAKKR------------RNAALAREKA-------AAEQLGDESVDGVWAPFADKSVLTAAEAGTMTAEQAALREAHLEAKRQKAERASQVDEEMDFDRMIEKKTAHLLPARLKAGQEAMAATSAFLDAGQEYDYQGRAWVEPPRGLKPDPDGE-HQVFLPKRCVHKWAGHTKGVQAIELFPTFGHLLLSGSLDHTVRIWDVYNERKCKRVYEGHSGAVRAIHFSNDGRQFLSAGFDRFIQLWDTETGQSIKAFTNRRVPYCVKFSPADNSQFVIGDSNNMVVQFDARSG-EVVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYAARDKFKLQRKKVFKGHSNAGYACQIGFSPNGQYVMSGDADGRLVFWDWKSTKLYKKLR 562          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: A0A7S2WI16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI16_9STRA)

HSP 1 Score: 491 bits (1265), Expect = 8.020e-164
Identity = 278/607 (45.80%), Postives = 378/607 (62.27%), Query Frame = 1
Query:  115 VMELVAGYGSGSDDDSNKSSASDDLSLQKSNRHTPSFRAPTVNAAPNVLVSREVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYAEDTRGQTVGNLSEHSKRQGDTVISAVPDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAPQAPAAKTDFEAGTMTEEQTKFREEWLAEQAKKHR-EYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKK--QSDYQGRSWMAPPAGAR-VEAEGEE-HKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKLQ 1920
            VM+LVA Y S  +D+ ++++  D L         P   +  V +AP V     V  A  AL    L +   K  +KG+     +N K E  +AP  GP HP R    +P  G +    G I   ++++W+F EQ+HT++ +GYA DTRGQ VG+   +  +QGD+V +  P +   R  +K E P    A +  +R      E   G   G+ G  LG     G WA        D E     E +   R E  AE+ KK   E+++  D DRRDERK SHLLP RH+++T++   +S FHGKK  + DYQGRSW+ PP G R + +EG+E H  F PKKCIHR+TGH KGVQAI +FP  GHLLLSAS DG++KIWDV+  R  RRTY GHS  VRDV F+NDG+ F++A +DR++R WDTETGQC++TF NRK+PY  +++P++ + FL                   VQEYNHH+  VN+VL  DD +RFVST+DDKK+L+WE+ IPVP+KYI +P MH++P T LHP G  F  QS++N+I  + ARD+FR+MRKK F+GHVNAGYAC++ +SPNGK++ASGDG+G+LF+WDW STK  R+ +
Sbjct:    9 VMDLVAAYSSDPEDEEHQANT-DHLK--------PEMISQPVKSAPLV-----VGAAPKALQPKYLALYDPKKAAKGLR----YNAKKEVLMAPSAGPKHPFRTQAFMPHLGAAAHANGYIAPTNVDQWAFEEQFHTYNSYGYAMDTRGQVVGDSGAYRDQQGDSVSTMKP-AKRKRSGKKAEDPILKAARAEAAR------EFDLGSGGGSGG--LGG----GPWAEHR---DEDAELLEEIEAKNHARMEEAAEKKKKAEDEFDVNADLDRRDERKFSHLLPARHDKNTKAMEPKSVFHGKKGTEVDYQGRSWVEPPLGVRPLSSEGDEIHDSFVPKKCIHRFTGHKKGVQAIRWFPDTGHLLLSASYDGTVKIWDVHNSRSVRRTYTGHSEGVRDVNFTNDGRHFITASFDRYMRYWDTETGQCVSTFCNRKVPYQVKFHPIEQDQFLXXXXXXXXXXXXXX-XXXXVQEYNHHIQSVNSVLICDDGKRFVSTADDKKILVWEWGIPVPMKYITDPTMHAVPTTALHPWGQHFTAQSMENEIHVYGARDRFRRMRKKVFRGHVNAGYACQITYSPNGKYMASGDGEGRLFVWDWKSTKQIRRFR 580          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: G4Z505_PHYSP (Putative pre-mRNA splicing factor n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z505_PHYSP)

HSP 1 Score: 491 bits (1264), Expect = 9.350e-164
Identity = 279/614 (45.44%), Postives = 375/614 (61.07%), Query Frame = 1
Query:  118 MELVAGYGSGSDDDSNKSSASDDLSLQKSNRHTPSFRAPTVNAAPNVLVSREVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHPHRRDL----PVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYAEDTRGQTVGNLSEHSKRQG----DTVISAVPDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAPQAPAAKT--DFEAGTMTEEQTKFREEWLAEQAKK---HREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQSDYQGRSWMAPPAGARVEAEGEEHKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKLQ 1920
            ME +  Y S  ++++++S++         +  +PS   P VN+AP V ++    +A+ A             T+    Q+ V+ P  E  LAP  GP      DL    P+ AG       GV+EQA +E++SF  QYHT++Q       R +  G         G    DT+++   ++       KK            ++V +            AA +D GD   DGIWAP     KT  D E GTMTE+Q   REE    + +K     E + E D DR  E+K  HLLP R      +   +STF G ++ DYQGR+W+ PP    ++ +  +H+ F PK+C+H++TGH+KGVQAI  FP YGHLLLS SMD +++IWDV   R  +R Y GHS AVR + FSNDG+QFLS  +DRFI+ WDTETGQ + +FT R++PYC ++YP+DN  F+ G S+N VVQ+D R G EIVQEYNHHL  VN+V FVDDN+RFVSTSDDKK+L+WE+ IPVPIKYI+EP MHSMPA TLHP+GGFF GQSL+N+I  +TARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGDG+GKL  WDW +TK+ +KL+
Sbjct:    1 MEALGAYASSDEEEASRSTS-------PRSTDSPSLALPVVNSAPFVALTDRQEEANKAAFL----------TAGTQTQLAVNLP-VESTLAPYVGPQSSGTMDLALVDPLRAGSGKQVVTGVVEQADMEDFSFEAQYHTYNQTLSRNPARNRAKGAPPSAPALPGEKLADTIVAPGEENVFTSCNAKKRK----------NQVVS---------KERAAAEDFGDEATDGIWAPYKEKGKTLTDAEKGTMTEQQKALREEHQEAKRRKAEAKEEADDEMDFDRMVEKKTGHLLPARLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPR--TLKPDNGDHQVFLPKRCVHKWTGHTKGVQAIELFPQYGHLLLSGSMDNTVRIWDVYNERKCQRVYEGHSGAVRGINFSNDGRQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTNFVVGDSNNMVVQFDTRSG-EIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFKGHQNAGYACQIGFSPNGQYIMSGDGEGKLVFWDWKTTKMIKKLR 574          
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Match: H3GUK7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUK7_PHYRM)

HSP 1 Score: 489 bits (1259), Expect = 5.290e-163
Identity = 284/614 (46.25%), Postives = 373/614 (60.75%), Query Frame = 1
Query:  118 MELVAGYGSGSDDDSNKSSASDDLSLQKSNRHTPSFRAPTVNAAPNVLVSREVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHPHRRDL----PVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYAEDTRGQTVGNLSEHSKRQGDTVISAV----PDSDLPRRKRKKESPGGAGAGSXGSRVATGGEEEAEGRNVGAAGDDLGDPEADGIWAPQAPAAK--TDFEAGTMTEEQTKFRE---EWLAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHGKKQSDYQGRSWMAPPAGARVEAEGEEHKCFTPKKCIHRYTGHSKGVQAIAFFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSDNRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKLQ 1920
            ME +  Y S SDD+++  + S        +  +P+F  PTVN+AP V +S    QAS A   +               Q+ V+ P  E  LAP  GP       L    P+  G       GV+EQA +E+ SF  QYHT +Q     +TR +  G         G+TV  +V     ++   RR  KK             +  T  +E A       A ++ GD   DG+WAP        TD E GTMTE+Q   RE   E    +A+   E + E D DR  E+K  HLLP R      +   +STF G  + DYQGR+W+ PP    ++ +  +H+ F PKKC+H++ GH+KGVQAI  FP YGHLLLS SMD +++IWDV   R  +R Y GH+ AVRD+ FSNDG+QFLS  +DRFI+ WDTETGQ + +FT R++PYC ++YP+DN  F+ G S+N VVQ+D R G EIVQEYNHHL  VN+V FVDDN+RFVSTSDDKK+L+WE+ IPVPIKYI+EP MHSMPA TLHP+GGFF GQS++N+I  +TARDKF+  RKK F+GH NAGYAC++ FSPNG+++ SGDG+GKL  WDW STK+ +KL+
Sbjct:    1 MEALGAYAS-SDDEASPHATS------PRSTDSPAFALPTVNSAPFVALSDIQEQASKAAFLAAASQ----------SQLAVNLP-VESTLAPYVGPQGSDSSALTLMDPLRTGSGKEVVTGVVEQADMEDLSFEAQYHTHNQTLSRNNTRTRVKGAPPVAPPLPGETVEDSVIVPSEENVFTRRNAKKR------------KNQTLSKERA-------AAEEFGDESTDGVWAPYTEKGNQLTDAEMGTMTEQQKALREQHQEAKRRKAEAKEEVDDEMDFDRMVEKKTGHLLPARLKAGQTAVEGKSTFMGDHEYDYQGRAWVEPPR--TLKPDDGDHQVFLPKKCVHKWAGHTKGVQAIELFPRYGHLLLSGSMDHTVRIWDVYNERKCQRVYEGHTGAVRDINFSNDGRQFLSCSFDRFIQLWDTETGQAVNSFTTRRVPYCVKFYPLDNTNFVVGDSNNMVVQFDTRSG-EIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSMNNQIDVYTARDKFKMNRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKSTKMIKKLR 574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14440.2670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G098_ECTSI0.000e+083.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2Y0E0_9STRA4.210e-19750.78Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CBI0_9STRA5.640e-18750.91WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
W7TQP6_9STRA1.070e-17753.51Pre-mrna-processing factor 17 n=2 Tax=Monodopsidac... [more]
K8Z4U6_NANGC2.970e-17553.51Pre-mRNA-processing factor 17 n=1 Tax=Nannochlorop... [more]
K3WD12_GLOUD5.300e-16747.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XJI7_9STRA4.480e-16448.11Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S2WI16_9STRA8.020e-16445.80Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
G4Z505_PHYSP9.350e-16445.44Putative pre-mRNA splicing factor n=4 Tax=Phytopht... [more]
H3GUK7_PHYRM5.290e-16346.25Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14440contigH-paniculata_contig14440:3964..6571 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1006.1
Seed ortholog evalue6.8e-291
Seed eggNOG ortholog2880.D7G098
Preferred nameCDC40
KEGG koko:K12816
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000348,GO:0000350,GO:0000375,GO:0000377,GO:0000389,GO:0000393,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031123,GO:0031124,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034399,GO:0034613,GO:0034622,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0045292,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071007,GO:0071013,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsKOG0282@1,KOG0282@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-14_005040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons2
Model size1920
Cds size1803
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14440.2670.1prot_H-paniculata_contig14440.2670.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14440 4081..6571 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929149.3208177-UTR-H-paniculata_contig14440:3963..40801622929149.3208177-UTR-H-paniculata_contig14440:3963..4080Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14440 3964..4080 +
1691480750.343039-UTR-H-paniculata_contig14440:3963..40801691480750.343039-UTR-H-paniculata_contig14440:3963..4080Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14440 3964..4080 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929150.4389517-CDS-H-paniculata_contig14440:4080..55651622929150.4389517-CDS-H-paniculata_contig14440:4080..5565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14440 4081..5565 +
1691480750.356888-CDS-H-paniculata_contig14440:4080..55651691480750.356888-CDS-H-paniculata_contig14440:4080..5565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14440 4081..5565 +
1622929150.4546807-CDS-H-paniculata_contig14440:6253..65711622929150.4546807-CDS-H-paniculata_contig14440:6253..6571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14440 6254..6571 +
1691480750.3664126-CDS-H-paniculata_contig14440:6253..65711691480750.3664126-CDS-H-paniculata_contig14440:6253..6571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14440 6254..6571 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14440.2670.1

>prot_H-paniculata_contig14440.2670.1 ID=prot_H-paniculata_contig14440.2670.1|Name=mRNA_H-paniculata_contig14440.2670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=601bp
MELVAGYGSGSDDDSNKSSASDDLSLQKSNRHTPSFRAPTVNAAPNVLVS
REVAQASDALMSSPLGMLGLKNTSKGVGQIMVHNPKAEHFLAPVQGPAHP
HRRDLPVPAGGRSTGTGGVIEQASLEEWSFHEQYHTFHQFGYAEDTRGQT
VGNLSEHSKRQGDTVISAVPDSDLPRRKRKKESPGGAGAGSGGSRVATGG
EEEAEGRNVGAAGDDLGDPEADGIWAPQAPAAKTDFEAGTMTEEQTKFRE
EWLAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKPARSTFHG
KKQSDYQGRSWMAPPAGARVEAEGEEHKCFTPKKCIHRYTGHSKGVQAIA
FFPGYGHLLLSASMDGSIKIWDVNGGRGQRRTYLGHSAAVRDVQFSNDGK
QFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCARYYPVDNNMFLCGCSD
NRVVQYDARHGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWE
YNIPVPIKYIAEPEMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQ
MRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKLFIWDWGSTKVYRKL
Q
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mRNA from alignment at H-paniculata_contig14440:3964..6571+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14440.2670.1 ID=mRNA_H-paniculata_contig14440.2670.1|Name=mRNA_H-paniculata_contig14440.2670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2608bp|location=Sequence derived from alignment at H-paniculata_contig14440:3964..6571+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGCTGTCTCTCCATCTAATTTCGTCATCAACAGTGGTGAAGACATAGCT GCACGTCGGTGATATTGACTTCTGCCTGAACGTGGTGTTCTTTAACGGCC TTAGAACACAACACGTTATGGAACTGGTTGCGGGATATGGAAGCGGCAGC GATGACGACAGCAATAAGTCCTCAGCATCAGACGACTTATCCCTTCAGAA GTCGAACAGACATACACCGTCGTTCAGAGCTCCCACCGTCAATGCTGCCC CCAACGTTCTTGTATCTAGGGAGGTAGCTCAAGCGTCAGATGCGCTCATG TCCTCTCCGCTGGGTATGCTGGGGCTCAAGAACACTTCCAAAGGCGTGGG CCAAATAATGGTCCACAATCCAAAGGCGGAGCACTTCCTGGCGCCGGTGC AGGGCCCCGCCCACCCACACCGACGAGACCTACCGGTCCCAGCCGGCGGC CGCTCCACGGGCACCGGTGGCGTTATCGAGCAGGCCTCCCTGGAGGAGTG GTCATTCCACGAGCAGTACCATACCTTCCACCAATTCGGCTATGCTGAGG ACACGCGAGGCCAAACGGTTGGCAACCTATCGGAGCACTCCAAGCGGCAG GGGGACACCGTGATTTCAGCCGTCCCCGATAGCGACCTGCCTCGACGCAA GCGAAAGAAGGAGTCGCCAGGCGGGGCTGGAGCCGGTTCCGGGGGCTCGA GAGTAGCGACGGGGGGAGAAGAAGAAGCAGAAGGAAGAAATGTTGGCGCG GCTGGCGATGATCTGGGCGATCCAGAAGCAGATGGGATTTGGGCGCCGCA GGCGCCTGCGGCGAAGACGGACTTTGAGGCCGGCACTATGACGGAGGAGC AGACCAAGTTCCGGGAGGAGTGGCTGGCGGAGCAGGCAAAGAAGCACCGC GAATACAACATGGAAGAGGATCATGACAGGCGAGACGAGCGCAAGATCTC GCACCTGCTGCCGCCGCGGCACAACCGCGACACGGAGTCGAAGCCGGCGC GGTCGACCTTCCATGGGAAGAAACAGAGTGATTACCAGGGGCGGTCGTGG ATGGCGCCGCCGGCGGGCGCGCGCGTGGAGGCAGAGGGTGAGGAGCACAA GTGCTTCACGCCGAAGAAGTGTATACACCGGTACACTGGTCACAGCAAGG GAGTCCAGGCCATCGCATTCTTCCCCGGCTACGGGCACCTGCTGCTGTCC GCGAGCATGGACGGGTCAATTAAGATCTGGGATGTGAACGGGGGCAGGGG GCAGCGGCGCACGTACCTGGGGCACTCGGCCGCCGTGCGAGACGTGCAGT TCAGCAACGATGGCAAGCAGTTCCTCAGCGCAGGTTACGACAGATTCATT CGGCAGTGGGACACCGAGACCGGACAGTGCATCGCCACTTTCACGAACCG CAAGATGCCATACTGCGCGAGGTACTATCCCGTGGACAACAACATGTTCC TGTGCGGTTGCTCGGACAACAGGGTGGTGCAGTACGACGCGCGGCATGGG AGCGAGATCGTGCAGGAGTACAATCATCACCTGGGGCCGGTCAACACGGT GCTGTTTGTAGATGACAACCAGCGTTTCGTCAGCACGTCCGACGATAAGA AGGTATGTGTGTGTGTGTGTGTGTGTTCTGTGTTGTAGATCATACTCTTC TTCGTGTCCTGTGTTTCATGTTTTGTGTTTTTATTCTTGAGCAAATGGGC AAACATGCTGATTTTGACTCGCTGTGCAAGTTTGATGTGTGTTTGTCAAT CTTCAGGCATTTACGTTGACCTGAACTAACTGCAAACAACGTGAACCCCG TGTCGTCTCCCATTTTTCATGCATTGAACCACGGAGTACGCCGCTGCCGA CTCTCCGCGTCCTCTGTGTTTGTCTCCGGGTAATTACCCATTAACTCTAC TGTTCGTTTTCATAGGAGGGGGGGGGGGGCTCCTATGCTGCGTGGGCTCA AACTATTTGTCAATGTGGTAGAAGCAGATCAGGTGCTTATTGGCATACAG ATACTCGTACGCCATTCGTGCAGCATAGGCAGCCTTGCTTCTTACGGCTG TTGCTAGGGACTGTTTTTTGTTTTCTCTTCATCTATTTTCTAGCTAATAT CTTGCGGTTTCTCGTTACAAAACATTTTCTGTCCAGCTGTGCCAACTCCG CCACCGCCGCCGCCACAACCGCTGCACGTGTTAATTCTTCTCGCTCTCAG TCTCTTCTCTCTATCTGTATTTGTAACACGCCTTTTTTATTTGTTCTTAG CTGTTTCAACACACCCATTTGTCGTAAATTCCACCACCAGGTGTTGATAT GGGAGTACAATATCCCTGTGCCCATAAAGTATATCGCGGAGCCGGAGATG CACTCGATGCCGGCCACGACGCTGCATCCGACCGGGGGCTTCTTCGTCGG GCAATCGTTGGACAACAAGATCGTCACGTGGACAGCGCGAGATAAGTTCC GGCAGATGAGAAAGAAGGAGTTCAAGGGACACGTGAACGCGGGATACGCG TGCCGGATGGCCTTCAGCCCTAACGGAAAGTTCTTGGCCTCCGGTGATGG ACAGGGAAAGCTGTTTATCTGGGACTGGGGAAGCACCAAGGTGTACCGCA AACTTCAG
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Coding sequence (CDS) from alignment at H-paniculata_contig14440:3964..6571+

>mRNA_H-paniculata_contig14440.2670.1 ID=mRNA_H-paniculata_contig14440.2670.1|Name=mRNA_H-paniculata_contig14440.2670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3606bp|location=Sequence derived from alignment at H-paniculata_contig14440:3964..6571+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAACTGGTTGCGGGATATGGAAGCGGCAGCGATGACGACAGCAATAA
GTCCTCAGCATCAGACGACTTATCCCTTCAGAAGTCGAACAGACATACAC
CGTCGTTCAGAGCTCCCACCGTCAATGCTGCCCCCAACGTTCTTGTATCT
AGGGAGGTAGCTCAAGCGTCAGATGCGCTCATGTCCTCTCCGCTGGGTAT
GCTGGGGCTCAAGAACACTTCCAAAGGCGTGGGCCAAATAATGGTCCACA
ATCCAAAGGCGGAGCACTTCCTGGCGCCGGTGCAGGGCCCCGCCCACCCA
CACCGACGAGACCTACCGGTCCCAGCCGGCGGCCGCTCCACGGGCACCGG
TGGCGTTATCGAGCAGGCCTCCCTGGAGGAGTGGTCATTCCACGAGCAGT
ACCATACCTTCCACCAATTCGGCTATGCTGAGGACACGCGAGGCCAAACG
GTTGGCAACCTATCGGAGCACTCCAAGCGGCAGGGGGACACCGTGATTTC
AGCCGTCCCCGATAGCGACCTGCCTCGACGCAAGCGAAAGAAGGAGTCGC
CAGGCGGGGCTGGAGCCGGTTCCGGGGGCTCGAGAGTAGCGACGGGGGGA
GAAGAAGAAGCAGAAGGAAGAAATGTTGGCGCGGCTGGCGATGATCTGGG
CGATCCAGAAGCAGATGGGATTTGGGCGCCGCAGGCGCCTGCGGCGAAGA
CGGACTTTGAGGCCGGCACTATGACGGAGGAGCAGACCAAGTTCCGGGAG
GAGTGGCTGGCGGAGCAGGCAAAGAAGCACCGCGAATACAACATGGAAGA
GGATCATGACAGGCGAGACGAGCGCAAGATCTCGCACCTGCTGCCGCCGC
GGCACAACCGCGACACGGAGTCGAAGCCGGCGCGGTCGACCTTCCATGGG
AAGAAACAGAGTGATTACCAGGGGCGGTCGTGGATGGCGCCGCCGGCGGG
CGCGCGCGTGGAGGCAGAGGGTGAGGAGCACAAGTGCTTCACGCCGAAGA
AGTGTATACACCGGTACACTGGTCACAGCAAGGGAGTCCAGGCCATCGCA
TTCTTCCCCGGCTACGGGCACCTGCTGCTGTCCGCGAGCATGGACGGGTC
AATTAAGATCTGGGATGTGAACGGGGGCAGGGGGCAGCGGCGCACGTACC
TGGGGCACTCGGCCGCCGTGCGAGACGTGCAGTTCAGCAACGATGGCAAG
CAGTTCCTCAGCGCAGGTTACGACAGATTCATTCGGCAGTGGGACACCGA
GACCGGACAGTGCATCGCCACTTTCACGAACCGCAAGATGCCATACTGCG
CGAGGTACTATCCCGTGGACAACAACATGTTCCTGTGCGGTTGCTCGGAC
AACAGGGTGGTGCAGTACGACGCGCGGCATGGGAGCGAGATCGTGCAGGA
GTACAATCATCACCTGGGGCCGGTCAACACGGTGCTGTTTGTAGATGACA
ACCAGCGTTTCGTCAGCACGTCCGACGATAAGAAGATGGAACTGGTTGCG
GGATATGGAAGCGGCAGCGATGACGACAGCAATAAGTCCTCAGCATCAGA
CGACTTATCCCTTCAGAAGTCGAACAGACATACACCGTCGTTCAGAGCTC
CCACCGTCAATGCTGCCCCCAACGTTCTTGTATCTAGGGAGGTAGCTCAA
GCGTCAGATGCGCTCATGTCCTCTCCGCTGGGTATGCTGGGGCTCAAGAA
CACTTCCAAAGGCGTGGGCCAAATAATGGTCCACAATCCAAAGGCGGAGC
ACTTCCTGGCGCCGGTGCAGGGCCCCGCCCACCCACACCGACGAGACCTA
CCGGTCCCAGCCGGCGGCCGCTCCACGGGCACCGGTGGCGTTATCGAGCA
GGCCTCCCTGGAGGAGTGGTCATTCCACGAGCAGTACCATACCTTCCACC
AATTCGGCTATGCTGAGGACACGCGAGGCCAAACGGTTGGCAACCTATCG
GAGCACTCCAAGCGGCAGGGGGACACCGTGATTTCAGCCGTCCCCGATAG
CGACCTGCCTCGACGCAAGCGAAAGAAGGAGTCGCCAGGCGGGGCTGGAG
CCGGTTCCGGGGGCTCGAGAGTAGCGACGGGGGGAGAAGAAGAAGCAGAA
GGAAGAAATGTTGGCGCGGCTGGCGATGATCTGGGCGATCCAGAAGCAGA
TGGGATTTGGGCGCCGCAGGCGCCTGCGGCGAAGACGGACTTTGAGGCCG
GCACTATGACGGAGGAGCAGACCAAGTTCCGGGAGGAGTGGCTGGCGGAG
CAGGCAAAGAAGCACCGCGAATACAACATGGAAGAGGATCATGACAGGCG
AGACGAGCGCAAGATCTCGCACCTGCTGCCGCCGCGGCACAACCGCGACA
CGGAGTCGAAGCCGGCGCGGTCGACCTTCCATGGGAAGAAACAGAGTGAT
TACCAGGGGCGGTCGTGGATGGCGCCGCCGGCGGGCGCGCGCGTGGAGGC
AGAGGGTGAGGAGCACAAGTGCTTCACGCCGAAGAAGTGTATACACCGGT
ACACTGGTCACAGCAAGGGAGTCCAGGCCATCGCATTCTTCCCCGGCTAC
GGGCACCTGCTGCTGTCCGCGAGCATGGACGGGTCAATTAAGATCTGGGA
TGTGAACGGGGGCAGGGGGCAGCGGCGCACGTACCTGGGGCACTCGGCCG
CCGTGCGAGACGTGCAGTTCAGCAACGATGGCAAGCAGTTCCTCAGCGCA
GGTTACGACAGATTCATTCGGCAGTGGGACACCGAGACCGGACAGTGCAT
CGCCACTTTCACGAACCGCAAGATGCCATACTGCGCGAGGTACTATCCCG
TGGACAACAACATGTTCCTGTGCGGTTGCTCGGACAACAGGGTGGTGCAG
TACGACGCGCGGCATGGGAGCGAGATCGTGCAGGAGTACAATCATCACCT
GGGGCCGGTCAACACGGTGCTGTTTGTAGATGACAACCAGCGTTTCGTCA
GCACGTCCGACGATAAGAAGGTGTTGATATGGGAGTACAATATCCCTGTG
CCCATAAAGTATATCGCGGAGCCGGAGATGCACTCGATGCCGGCCACGAC
GCTGCATCCGACCGGGGGCTTCTTCGTCGGGCAATCGTTGGACAACAAGA
TCGTCACGTGGACAGCGCGAGATAAGTTCCGGCAGATGAGAAAGAAGGAG
TTCAAGGGACACGTGAACGCGGGATACGCGTGCCGGATGGCCTTCAGCCC
TAACGGAAAGTTCTTGGCCTCCGGTGATGGACAGGGAAAGCTGTTTATCT
GGGACTGGGGAAGCACCAAGGTGTACCGCAAACTTCAGGTGTTGATATGG
GAGTACAATATCCCTGTGCCCATAAAGTATATCGCGGAGCCGGAGATGCA
CTCGATGCCGGCCACGACGCTGCATCCGACCGGGGGCTTCTTCGTCGGGC
AATCGTTGGACAACAAGATCGTCACGTGGACAGCGCGAGATAAGTTCCGG
CAGATGAGAAAGAAGGAGTTCAAGGGACACGTGAACGCGGGATACGCGTG
CCGGATGGCCTTCAGCCCTAACGGAAAGTTCTTGGCCTCCGGTGATGGAC
AGGGAAAGCTGTTTATCTGGGACTGGGGAAGCACCAAGGTGTACCGCAAA
CTTCAG
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