mRNA_H-paniculata_contig14440.2669.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 119 bits (297), Expect = 5.940e-26 Identity = 76/162 (46.91%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 367 INHSRQLSGGVGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVRAT-TKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM---QSSTRCRWRPRWRR 840 IN R+ G G RE +KL +L PDALGG+P++ + F KF Y +FRKRN FSI RT+V QKLP+GYEG +W V+K+R T K A EIYA + P A D+S ++ +L+SEQ +SV+ E R QSSTRCRWRP WRR Sbjct: 120 INEQRKQHRGCGNREVTSKLLELKPDALGGMPANTKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWTTVMKLRETLVKRAGEIYARRQ----PPAPDESP-----IKGEDLTSEQLVSVEAEDSRNSATWIRRQSSTRCRWRPLWRR 272
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.130e-24 Identity = 71/145 (48.97%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 367 INHSRQLSGGVGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVR-ATTKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM 798 IN R+L G G RE +NKL +L PDALGG+P++ + F KF Y +FRKRN FSI R +V QKLP+GYEG +WA V K+R A K A EIYA + P A D+S ++ +L+SEQ SV+ EVF ELGNM Sbjct: 139 INEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRH----PPAPDESP-----IKGEDLTSEQPASVEAEVFEELGNM 274
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE) HSP 1 Score: 110 bits (274), Expect = 6.390e-24 Identity = 76/172 (44.19%), Postives = 100/172 (58.14%), Query Frame = 1 Query: 286 SRAWKVPAAFGAITEGARPAGLTWRRRINHSRQLSGGVGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVR-ATTKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM 798 S+A +VP+ A T A L IN R+ G G RE +NKL QL PDALGG+P++ + F KF Y QFRKRN FSI RT+V QKLP+GYEG +WA V+ +R A + A I+A ++ P A D+S ++ +L+ EQ SV+ EVF ELGNM Sbjct: 146 SKAKQVPSGGKASTVDAAEQALV--DYINEQRKQHRGCGNREVINKLLQLKPDALGGMPANAKPEEALAFKIKFNSWYQQFRKRNGFSIRRRTSVGQKLPKGYEGTAWATVMNLREALVQRAGAIHARRN----PPAPDESP-----IKGEDLTCEQLASVEAEVFEELGNM 306
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 112 bits (279), Expect = 7.220e-24 Identity = 70/145 (48.28%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 367 INHSRQLSGGVGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVR-ATTKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM 798 IN R+ G G RE +NKL +L PDALGG+P++ + F F Y +FRKRN FSI RT+V QKLP+GYEG +WA V+K+R A K A EIYA + P A D+S ++ +L+SEQ SV+ EVF ELGNM Sbjct: 108 INEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVNFNPWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRH----PPAPDESP-----IKGEDLTSEQLASVKAEVFEELGNM 243
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5K7Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y1_9PHAE) HSP 1 Score: 110 bits (274), Expect = 3.780e-23 Identity = 74/147 (50.34%), Postives = 93/147 (63.27%), Query Frame = 1 Query: 415 LNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFR-KRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVR-ATTKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM---QSSTRCRWRPRWRR 840 +NKL +L PDALGG+P++V + F KF Y +FR KR FSI RT+V QKL +GYEG +WA +K+R A K A EIYA + P A D+S ++ +L+SEQ SV EVF ELGNM Q+STRCRWRP WRR Sbjct: 1 MNKLLELKPDALGGMPANVKPEEALAFKVKFNSWYQRFRSKRYGFSIRRRTSVGQKLSKGYEGMAWATGMKLREALVKRAGEIYARRH----PPAPDESP-----IKGEDLTSEQLASVGAEVFEELGNMDRRQTSTRCRWRPLWRR 138
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5KKK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK4_9PHAE) HSP 1 Score: 105 bits (262), Expect = 7.800e-23 Identity = 66/145 (45.52%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 367 INHSRQLSGGVGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVRAT-TKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM 798 IN R+ G RE ++KL ++ PDALGG+P++ + KF Y +FRKRN FSI RT+V QKLP+G+EG +WA V+K+R T +K A EIYA + P A D+S ++ +L+SEQ SV+ EVF ELGNM Sbjct: 82 INDQRKQPRRCGNREVMDKLLEMKPDALGGMPANAKPEEALALKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGHEGMAWATVMKLRETLSKRAGEIYARRH----PPAPDESP-----IKGVDLTSEQLASVEAEVFEELGNM 217
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5JAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU0_9PHAE) HSP 1 Score: 108 bits (271), Expect = 9.920e-23 Identity = 69/145 (47.59%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 367 INHSRQLSGGVGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVR-ATTKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM 798 IN R+ G G RE +NKL +L PDALGG+P++ + F KF Y +FRKR+ SI RT+V QKLP+GYEG +WA V+K+R A K A EIYA + P A D+S + + +L+SEQ SV+ EVF ELGNM Sbjct: 153 INEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRHGSSIRQRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRH----PPAPDESPT-----KGEDLTSEQLASVEAEVFEELGNM 288
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5JCV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV1_9PHAE) HSP 1 Score: 107 bits (267), Expect = 3.690e-22 Identity = 68/145 (46.90%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 367 INHSRQLSGGVGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVR-ATTKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM 798 IN R+ G G RE +NK+ +L PDALGG+P++ + F KF Y +FRKR+ SI RT+V QKLP+GYEG +WA V+K+R A K A EIYA + P A D+S + + +L+SEQ SV+ EVF ELGNM Sbjct: 207 INEQRKQHRGCGNREVMNKVLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRHGSSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRH----PPAPDESPT-----KGEDLTSEQLASVEAEVFEELGNM 342
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5L819_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L819_9PHAE) HSP 1 Score: 105 bits (262), Expect = 6.030e-22 Identity = 67/145 (46.21%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 367 INHSRQLSGGVGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKVR-ATTKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM 798 IN + G G RE +NKL +L PDALGG+P++ + F KF Y +FRKRN F I RT+V QKLP+GYEG +WA V+K+R A K A EIYA + P A D+S ++ +L+SEQ SV+ EVF E+G M Sbjct: 136 INERHKQHRGCGNREVMNKLLELKPDALGGVPANAKPEEALAFKVKFNSWYQRFRKRNGFRIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRH----PPAHDESP-----IKGEDLTSEQLASVEAEVFEEVGIM 271
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.020e-21 Identity = 65/135 (48.15%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 397 VGRREALNKLCQL*PDALGGLPSSVNAAKIEQFNSKFGELYAQFRKRNRFSIPPRTTVAQKLPQGYEGKSWAWVLKV-RATTKWAAEIYAVKDSVAAPSA*DQSASAALNVEATELSSEQQLSVQEEVFRELGNM 798 +G RE +NKL +L PDALGG+P++ + F KF Y +FRKRN FSI RT+V QKLP+GYEG +WA V+K+ A K A EIYA + P A D+S ++ +L+SEQ SV+ EVF E+GNM Sbjct: 189 LGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRH----PPAPDESP-----IKGEDLNSEQLASVEAEVFEEVGNM 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14440.2669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14440.2669.1 >prot_H-paniculata_contig14440.2669.1 ID=prot_H-paniculata_contig14440.2669.1|Name=mRNA_H-paniculata_contig14440.2669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp MPVETTLETTRVQDARISTARKQKERFTLHLAMMSDGRNVTPRIAVKGTLback to top mRNA from alignment at H-paniculata_contig14440:1859..3219- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14440.2669.1 ID=mRNA_H-paniculata_contig14440.2669.1|Name=mRNA_H-paniculata_contig14440.2669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1361bp|location=Sequence derived from alignment at H-paniculata_contig14440:1859..3219- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14440:1859..3219- >mRNA_H-paniculata_contig14440.2669.1 ID=mRNA_H-paniculata_contig14440.2669.1|Name=mRNA_H-paniculata_contig14440.2669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=384bp|location=Sequence derived from alignment at H-paniculata_contig14440:1859..3219- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |