mRNA_H-paniculata_contig1423.2569.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1423.2569.1
Unique NamemRNA_H-paniculata_contig1423.2569.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: A0A6H5JCQ4_9PHAE (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCQ4_9PHAE)

HSP 1 Score: 649 bits (1674), Expect = 8.300e-224
Identity = 329/464 (70.91%), Postives = 380/464 (81.90%), Query Frame = 1 
Query:  334 RRRTISSMSTPRRVTALRMVFDPDFTPVALNLFHKWLGSQKNSNLKIGDQIALAGRSPLDGGRGLMATKPIQNGKTVLTIPQSLALTATGLGRSGIARYVKGFEGWTGDTGLIALQLLWERAQGDKSPIAPWIAVLPAPGELDMPLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPEDKFGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGLLGSKAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSGAELTCELEFSIGQDDRFFDDKEDILQSQGLGTSTTFELTSVGLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEEDILAGKREATHRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEV 1725
            RRRT  + +T      L M FDPD TP AL+ FH WL     S +++ D   LAGRSPL GGRGL+ATK I+ G++VL IPQSL LTA GL  SGIA+YVKGFEGWTG+TGLIALQ+LWERA  + S +APWIAVLP  GEL+MPLFW E DL LADASSTRG+SGF ADVDED+AWL++N F  +P VFP DKFG  DFRWAVGVALSRSFFVDGELRLTPLVDFANH+S R + EP GG TGL GSKAVVLRAGK YEEGEEFFVSYGPKGAA YLEENGFVPP+SG+E+TCELEFSI +DD+FFDDKEDIL+  GL TS+TF+LT+VGLPD EL +FLRL  ++GEDAFLLEGIFRNE+W F+ EP+S+ NE AVN  LA+RC  EL+   GT+ EE DI++GK EA+ RQRLCA VR+GER+AL+MT SWC++DSKALDRKEYYQERRLKELQLDLP+E 
Sbjct:   61 RRRTQHARTT---TPPLHMAFDPDVTPGALDAFHAWL---TKSGVRLTDNAVLAGRSPLAGGRGLVATKAIETGQSVLAIPQSLGLTAAGLKSSGIAQYVKGFEGWTGETGLIALQVLWERALREGSKMAPWIAVLPTEGELEMPLFWGEADLTLADASSTRGISGFVADVDEDFAWLSENAFSKHPKVFPADKFGPGDFRWAVGVALSRSFFVDGELRLTPLVDFANHSSLRGVSEPTGGTTGLFGSKAVVLRAGKKYEEGEEFFVSYGPKGAAGYLEENGFVPPVSGSEVTCELEFSIPEDDKFFDDKEDILERAGLRTSSTFDLTAVGLPDAELVRFLRLLCVSGEDAFLLEGIFRNEVWDFMNEPVSRPNEEAVNELLATRCEEELKALFGTAREEADIVSGKVEASERQRLCARVRQGERMALQMTRSWCESDSKALDRKEYYQERRLKELQLDLPWEA 518
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: A0A835ZE37_9STRA (Putative ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloropl n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE37_9STRA)

HSP 1 Score: 401 bits (1031), Expect = 3.430e-127
Identity = 223/479 (46.56%), Postives = 301/479 (62.84%), Query Frame = 1 
Query:  430 FHKWLGSQKNSNLKIGDQIALAGRSPLDGGRGLMATKPIQNGKTVLTIPQSLALTATGLGRSGIARYVKGFEGWTGDTGLIALQLLWERAQGDKSPIAPWIAVLPAPGELDMPLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPEDKFGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHAS-----------------SRSMLEPIGGMTGLLGSKAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSGAELTCELEFSIG----QDDRFFDDKEDILQSQGLGTSTTFELTSVGLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEEDILAGKREA-THRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVY-PLDQQAGRVR-----RDMDW 1782
            F  WL     + +K G+ +   G+S LDGGRGLM T P++ G+  +T+P +L +TA  + +  ++ ++KG++G  GDTGLIALQLL+E+ QG KS IA W+++LPA G LDMPLFW E+DLA+AD SSTRG SG  ADV ED+AWLAQN F    +  P+D F    F WAVG  +SR+FFVDG L L PL+DFANH                     +  E  G   G+ G K V L AG++Y  GEEF +SYGPKGAA YLEE+GF+P   G       E  +G     +DRF DDKEDIL++Q L  + +F+L   GLPD  + ++ RL M+ G DAFLLE +FR +IWGF+ EP+S  NE A NN +   C+A+L+ F  +++E+E +LA   E  + R +LCA +R  ER AL+ T ++  TD+ ALDRKEYYQ RRL++L LD P +  E++ P     G  R     R++DW
Sbjct:   55 FKAWLAK---AGVKGGECLLEIGQSSLDGGRGLMTTAPLKAGQAAVTVPATLCITADKVVKGALSSHLKGYDGCLGDTGLIALQLLYEQQQGSKSAIAAWLSLLPAQGTLDMPLFWPEKDLAVADGSSTRGFSGLRADVIEDHAWLAQNMFTTATSPIPKDAFTEDAFVWAVGCVISRAFFVDGALHLVPLIDFANHGDVDDDSXXXXXXXAAPLPETAAQESCG--LGVFGGKGVRLVAGREYRPGEEFLISYGPKGAATYLEEHGFLPKGDGGGGVVGSEIELGLKAEAEDRFRDDKEDILETQDLPFNLSFDLYPSGLPDQAMVQYARLVMLGGMDAFLLEAVFRTDIWGFMEEPVSAANELAANNYIIGICQAQLDSFTSSAEEDEKLLASGGEGLSKRHQLCAQLRSAERAALQHTVNFFLTDNTALDRKEYYQARRLRDLNLDRPLDESEIFEPGSASNGMPRGRDAQRELDW 528
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: A0A6S9FGC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FGC7_HETAK)

HSP 1 Score: 344 bits (883), Expect = 1.080e-105
Identity = 200/467 (42.83%), Postives = 273/467 (58.46%), Query Frame = 1 
Query:  412 PVALNLF---HKWLGSQ--KNSNLKIGDQIALAGRSPLDGGRGLMATKPIQNGKTVLTIPQSLALTATGLGRSGIARYVKGFEGWTGDTGLIALQLLWERAQGDKSPIAPWIAVLPAPGELDMPLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPT-VFPEDKFGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGLLGSKAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSGAELTCELEFSIGQDDRFFDDKEDILQSQGLGTSTTFELTSV--GLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEEDILA--GKREATHRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVYPLDQQAGRVRRDMDW 1782
            P+ ++++     WL     K+ ++ +GD      +  L  G+GL+ TK ++ G   L IPQSL L+ +    S I +Y+K FEGWTG+ G+IAL LL+E++ G+ S   P+IA LP   +++ PLFW+EE L LA  SST+G+ GF  DV ED+        G +P   FP + F    F+WAV  A SRSFFVDGELRL PL+DFANH    + +EP GG  G+ G KAV   A + Y+ G EF VSYGPK  A YLEE+GF+P L   + +C L F +   D + DDK DIL+  G      F++ SV  G PD  + +FLRL  +   DAFLLE +FR+E W F+A PIS+ NEA V   +  +    L  FHG  + ++ ++   G+     R R  A +R  ER AL+ T  W + D++ALD KEYYQERRLK L LD P +  E+      +    RDMDW
Sbjct:   47 PIKMSVYADLEAWLADNGVKDLSVTVGDS-----KGKLGMGKGLIVTKAMKRGTAALNIPQSLCLSVSSALESQIGKYLKNFEGWTGEVGIIALHLLYEKSIGNDSKFGPFIAALPE--QIEHPLFWNEETLELAQKSSTKGIKGFVEDVAEDFEDFKSQVIGRSPPGTFPAEFFNLESFKWAVACAASRSFFVDGELRLVPLLDFANHGDGVAFVEPEGGGMGIFGGKAVKALANQAYQPGSEFLVSYGPKSPAEYLEEHGFLPRLDTKKTSCMLAFGVRDADPYRDDKLDILELAGEEPEQCFDVFSVDNGEPDPAMMRFLRLVTLTSSDAFLLEAVFRDECWDFMALPISEVNEANVGKLVMDKIDEALGNFHGDREGDQALVKTDGQEWVAERVRGLARLRLAERAALEATRGWFERDAQALDLKEYYQERRLKSLGLDRPLDDAELM-----SSGAARDMDW 501
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: A0A0G4GD31_VITBC (SET domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GD31_VITBC)

HSP 1 Score: 296 bits (757), Expect = 6.170e-87
Identity = 194/485 (40.00%), Postives = 276/485 (56.91%), Query Frame = 1 
Query:  310 RGHHHRRCRRRTISSMSTPRRVTALRMVFDPDFTPVALNLFHKWLGSQKNSNLKIGDQIALAGRSPLDGGRGLMATKPIQNGKTVLTIPQSLALTATGLGRSGIARYVKGFEGWTGDTGLIALQLLWERAQGDKSPIAPWIAVLPAPGELDMPLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPEDKFGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGLLGS-KAVVLRAGKDYEEGEEFFVSYGP-KGAAAYLEENGFVPPLSGAELTCELEFSIGQDDRFFDDKEDILQSQGLGT-STTFELTSVGLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEED--ILAGKR-EATHRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVYPLD 1746
            R HHH   R  +I  M  PRR+T    +        AL+ F +WL    N  +K  D +++  +     G GL+ TKPI+ G+   ++P SL++T     ++ +  +++G      +  ++AL LL+E+++GD S IAPW+AVLP   EL+ P+ W + + A    S+T+ +S +  +   ++  L +     +P VF    F   +++WA+ V  SRSFFVD  LR+TPLVDF NH  + ++ EP G   G LGS + V LRA +DY  G+EF VSYGP + A  +L+  GF+P    A  +CE+E SI + D FFDDKEDIL +    T S  ++L +   PD  L +FLRL  I  +DAF+LE +FR E+W  ++ P S  NE      L   C   L  F  TSD+E D  ILAG   EA+ RQ+L A VR  E+ AL+ T  WC++++  L  KEYYQERRLK L LD P   DEVY  D
Sbjct:   44 RRHHHAPIRPSSI--MQQPRRLTPTVSMSVSSSRAAALDSFKQWLA---NKGVK-SDSVSVDVKPSDVAGLGLICTKPIKRGEAAASVPMSLSITKESATQTPMREHLEGAMSDNSEMAMLALYLLYEKSKGDASEIAPWLAVLPTKDELNNPILWSDGERAELARSTTKAISTWLEERSLEFMRLQRRVMEKHPNVFDPATFTLENYQWAMAVVTSRSFFVDSRLRMTPLVDFVNHDPAANV-EPDGAPMGFLGSSRGVRLRADRDYAVGDEFRVSYGPERSAVEFLQMFGFIPEY--APSSCEIEMSIREADSFFDDKEDILVNNEFRTLSQVWDLQADKDPDPTLLQFLRLREIGQKDAFILEPLFRGEVWYHMSLPFSPANEGDALKVLEDECVRLLTSF--TSDDETDRRILAGSSPEASERQKLMARVRVSEKAALQSTIEWCESEALGLRLKEYYQERRLKLLNLDGPLTDDEVYADD 517
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: A0A7S2A866_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A866_TRICV)

HSP 1 Score: 280 bits (717), Expect = 2.150e-80
Identity = 189/478 (39.54%), Postives = 257/478 (53.77%), Query Frame = 1 
Query:  523 GLMATKPIQNGKTVLTIPQSLALTATGLGRS----GIARYVKGFEGWTGDTGLIALQLLWERAQ--------GD----------KSP----IAPWIAVLPAPGELDM--PLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPE----------DKFGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGLLGS-KAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSGAELTCELEFSIGQDDRFFDDKEDILQSQGLGTST-----TFELTSV-----GLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEEDILAGK-----REATHRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVYPLDQQAGRVRR----DMDW 1782
            GL+AT  +++G   L++P   AL  T  G S    GI    +G++GWTGD GLIA+ +L E A+        GD          K P    I  WI  LP P E+    PL W E+D  +  +SSTR +     DV+ED AWL +  +  + T FP+          D F +  + WAV +  SR+ FVDG LRL P++D ANH      +E  GG  G  G+ K   +R G+ Y +G+E  VSYGPK AA YL E+GFVPP + +    EL F I + DRF DDK D+L+ +   ++      +F+L ++     G PD  + +FLRL+ + G+DAFLLE IFR EIW F+A P+S+TNE  V +A+   C   L+G      + ED   G       +    +RLCAAVR  ER AL  T  + + D  ALD KEYYQERRLK+L LD  +  D+  P D   G+ R     D+DW
Sbjct:  128 GLIATDDVRSGDVALSVPYDDALQFTAKGSSVTFGGILP--EGYDGWTGDAGLIAMSVLNELARTAAADDGGGDGGAGVPLPKRKPPVQNLIEAWIKSLPTPSEMSSSHPLLWSEDDQEILQSSSTRKVYRTLDDVEEDAAWLTERVWDLDRTKFPDTVTLENGDERDCFNADGYLWAVAIVTSRAVFVDGALRLIPVLDMANH-DDIGTVEVGGGTMGAFGTTKGAEIRTGRKYSKGQEVTVSYGPKSAAEYLLEHGFVPPRAKSTAVSELTFEIDEGDRFRDDKLDVLEFETYDSAPMEPVQSFDLVAMPGGGDGQPDPAMAQFLRLAKLGGKDAFLLESIFRKEIWEFMAYPVSETNEGDVCDAIREACEGALKGMEELESKSEDAAEGAAAGEDEDENSPRRLCAAVRTAERAALSRTLEYVERDRMALDLKEYYQERRLKDLGLDSEWSEDDDNP-DVGWGQTRAPGSGDLDW 601
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: A0A7S2FAY5_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FAY5_9STRA)

HSP 1 Score: 276 bits (707), Expect = 6.310e-80
Identity = 174/433 (40.18%), Postives = 240/433 (55.43%), Query Frame = 1 
Query:  517 GRGLMATKPIQNGKTVLTIPQSLALTATGLGRSGIARYVKGFEGWTGDTGLIALQLLWERAQGDKSPIAPWIAVLP---APGELDMPLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPEDKFGSAD---FRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGL--LGSKAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSGAELTC--ELEFSIGQDDRFFDDKEDILQSQGLGTSTTFELTSVGLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEEDILAGKREATHRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVYPLDQ-QAGRVRRDMDW 1782
            G G+   K +  G  V+ +P  L +T      S +   ++ F+GWTG TG+IA QLL+E++QG +S   PWI +LP    PG L++PLF     +A  D  STR +     +V ED+ WL++           E    SAD   +RWAVG+ LSRSFFV G   L PLVDFANH  + ++ E  GG  G+     KAV + + + +  GEE  V+YG +  A YLEE GFVPP +  +  C  EL F + + DRFFDDK D+L+ Q L  S +F+L      D ++ +FLRLS + G DAFLLE +F NE+WGF++ P+S+ NE AV N + SRCR  L        +E     G            +VR+GE  AL+ T SW   D + L+ K+YYQERRLKEL LD  +  ++         GR   ++DW
Sbjct:  103 GMGIRLKKKVGKGDKVVAVPLQLCMTVETARSSAVGPLLENFDGWTGATGIIAAQLLFEKSQGARSKFFPWIELLPPARTPGALELPLFGG---MAGVDKCSTRPIKDLEDEVTEDFEWLSEQE---------EVSLLSADLEAWRWAVGIVLSRSFFVHGGTCLAPLVDFANHDPA-NLREISGGFVGIPPFAKKAVCIFSDRPFAAGEELTVNYGRRSGACYLEEYGFVPP-NDLDENCLVELVFGLDEKDRFFDDKADVLEQQELDMSASFDLGFGSEADPDMVQFLRLSCLKGADAFLLEPVFSNELWGFMSYPVSEENERAVGNLVLSRCRTALATLRAEEADEPSQGLGP--------AVISVRQGEIRALQATVSWWTRDLELLNLKQYYQERRLKELNLDKEWSPEDGQTESSFSGGRAPGNVDW 513
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: A0A7S2NWX9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWX9_9STRA)

HSP 1 Score: 273 bits (698), Expect = 2.380e-78
Identity = 178/457 (38.95%), Postives = 254/457 (55.58%), Query Frame = 1 
Query:  523 GLMATKPIQNGKTVLTIPQSLALTATGLGR--SGIARYVKGFEGWTGDTGLIALQLLWERAQ---------------GDKSPIAPWIAVLPAPGEL--DMPLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPE---DK---FGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGLLGSKA-VVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSGAELTCELEFSIGQDDRFFDDKEDILQSQGLGTST----TFELTSV----GLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEEDILAGKREATHR-QRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVYPLDQQAGRVRRD--MDW 1782
            GL+AT+ ++ G  V++IP    LTA    +  + +      ++GWTGD GLIAL +L ERA+                 +   A W A LP+  E+  + PL W E+D     +SST+ +     D +ED +WL    +  + ++FPE   DK   F    F+WA+ +A SR  FVDG L+L P++DF+NH    ++ E  GG  G  G+ A V ++A K Y++G+E FVSYGPK AA YL E+GF+P  +      EL F + ++DRFFDDK D+L+ +  G        F++ +     G PD  L +FLRL+ +   DAFLLE IFR E+WGF+A P+S+ NE  V  A+ S C   L+  +  +D   D +  K EA  + +R CA +R  ER AL+ T  +   + +ALD KEYYQERRLK+L LD P+E DE  P      R   D  +DW
Sbjct:   84 GLIATENVRKGDAVISIPNDFCLTADKARQVYTDMGFMSDKYDGWTGDLGLIALLILRERAKLAEDYSDSYMSKEDSSKRELFAEWAATLPSMEEMMGEHPLLWVEDDQEELQSSSTKKIYRLLDDAEEDASWLEDKMWSKDRSLFPEKDADKQPCFTLEGFKWALSIANSRCVFVDGSLKLAPIIDFSNHNDFETV-EVTGGFFGTFGTTAGVQVKADKKYKKGDEIFVSYGPKSAAEYLLEHGFMPDSTKTTAVAELTFEVDENDRFFDDKADVLEFETGGAPIEPVQAFDVVAAPGKDGQPDPALMQFLRLAKLGNTDAFLLESIFRKEVWGFMAYPVSEKNEREVIEAIISSCTDALKEMNEINDAATDEVNSKDEAISKNKRACATLRCIERRALQRTLEYVQREEEALDLKEYYQERRLKDLGLDSPWEGDENNPDVGWGARKPGDGGLDW 539
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: A0A7S2SPV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPV0_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.970e-71
Identity = 150/349 (42.98%), Postives = 205/349 (58.74%), Query Frame = 1 
Query:  772 FWDE-EDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPEDKFGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGLLGSKAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSG-AELTCELEFSIGQDDRFFDDKEDILQSQGLGTSTTFELTSV--GLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFH--------GTSDEEEDILAGKREATHRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVYPLDQQAGRVRRDMDW 1782
            FW++ + L      STR +  F+ +V +D+AWL +N F  +   FPE  F  A +  AVG+A+SRSFFVDG  RLTP +DF NH    + L+  GGM G+LG K V L A +    GEE  +SYG +  A YLEE GFVP   G ++   EL F IG+  R +DDK DIL+S GL  +  FEL++   G PD ++ +FLRL+ ++G D FLLE +FR+EIW F+A P+S+ NE AV + +  RC A L            G+  +E D+ A       RQ L + VR GE  AL+   SW   D++ L +KEYYQERRLK L LD P+  ++    +  AGR   ++DW
Sbjct:    1 FWEQGQGLESLKGCSTRPIQDFTQEVKDDFAWLQENVFAPHSDEFPEQYFNEAAWCHAVGLAVSRSFFVDGATRLTPFLDFVNHDDRGNELKS-GGM-GMLGGKEVRLVASQSCSPGEEVCMSYGVRAPAEYLEEYGFVPARGGRSDNIAELVFEIGEGQRCYDDKLDILESAGLDATAAFELSAAAGGNPDPDMVQFLRLACLDGADLFLLEPVFRSEIWDFMALPVSEENEKAVGSLIIERCEAALVDMREAEKAATAGSPAQEGDLAAS------RQSLASRVREGEVKALETAVSWWKRDAEFLKQKEYYQERRLKALNLDKPWSPEDEMESNFSAGRAPGNVDW 341
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: K0QYB9_THAOC (Rubis-subs-bind domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QYB9_THAOC)

HSP 1 Score: 254 bits (649), Expect = 8.630e-71
Identity = 180/478 (37.66%), Postives = 254/478 (53.14%), Query Frame = 1 
Query:  523 GLMATKPIQNGKTVLTIP------QSLALTATGLGRSGIARYV-KGFEGWTGDTGLIALQLLWE----------------RAQGDKSPIAPWIAVLPAPGELDM--PLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPED---KFGSAD----------FRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGLL--GSKAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPL-----SGAELTCELEFSIGQDDRFFDDKEDILQSQG-----LGTSTTFELT----SVGLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEEDILAGKREATHRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVYPLDQQAGRVR----RDMDW 1782
            GL+AT     G  V ++P        LAL      +    + + +G++GWTGD GL+A+ LL E                R +G ++ ++ WIA LP+  E+    PL W+E++  +   SST+ +     D+++D +WL +N + A+   FPE    + G AD          FR+AV V  SRSFFVDG LRL P VD+ANH    S  E +GG  G+L   SK V+L++GK    G+E  +SYGPKG A Y+ ++GFVPP+      G  +T EL F + + DRF DDK DIL+ +      +  +  F++     S G PD  + +FLRL  + G+DAFLLE IFR EIWGF++EP+S+ NE A   A+   C A L   +    E+        E     +LC+ VR  ER AL+ T ++   +++ALD KEYYQERRLK L LD      E  P D+     R     D DW
Sbjct:  129 GLVATGSASKGDLVASLPFNEGDGSGLALEPNFAAKIVYDKVLPEGYDGWTGDVGLLAMLLLNEMARQDADSPKGVDLPRRKEGVQALMSAWIASLPSFEEMTEMHPLLWNEDEQEIMQLSSTKKIYRLLDDIEDDSSWLDENVWSADREKFPETVKIRVGDADEERQCFTVDGFRYAVAVVRSRSFFVDGALRLLPYVDYANHDDYDSN-ELVGGGIGMLWGSSKGVLLKSGKALRVGDEVRISYGPKGPADYILDHGFVPPMCQLSTQGGAITAELSFEVDESDRFRDDKLDILEFETYDLAPMEPAQVFDVVGGPGSTGEPDPAMIQFLRLVKLAGKDAFLLESIFRKEIWGFMSEPVSEDNEKASVTAVQEACEAALSDMNELESEDSSASPSLNE-----QLCSMVRGSEREALERTLAYIKQEAEALDLKEYYQERRLKTLGLD-----SEWTPEDEFGSTTRVPGAADYDW 595
[Close]
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Match: B7FNW3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNW3_PHATC)

HSP 1 Score: 247 bits (631), Expect = 6.670e-69
Identity = 169/461 (36.66%), Postives = 235/461 (50.98%), Query Frame = 1 
Query:  523 GLMATKPIQNGKTVLTIPQSLALTATG-LGRSGIARYV--KGFEGWTGDTGLIALQLLWE------RAQGDKSPI---------APWIAVLPAPGELDMPLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPEDK---------FGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMTGLLGS-KAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSGAELTCELEFSIGQDDRFFDDKEDILQSQGLGTST-----TFELTSV----GLPDVELTKFLRLSMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGFHGTSDEEEDILAGKREATHRQRLCAAVRRGERLALKMTASWCDTDSKALDRKEYYQERRLKELQLDLPFEVDEVYPLDQQAGRVRR----DMDW 1782
            GL+AT+ I+ G+  L +P  +    +  L R+ + + V  + +  WTGD GLIAL +L E         G K PI         + W+A LP P +++ PL W EED  +  +SST  +     D++ED  WL  N F  +   FP            F    F+WA+ +A SRSFFVD  +RL PL+DF NHA   +  E   G  G  G+ K   L AG+ YE GEE F+ YGPK AA YL E+ F P  S      EL F +   DRF+DDK DIL+ +    S      +F++ S     G PD  + +F+RL  +   DAFLLE IFR E+WGF+  P+S+TNE  V +A+   C+  L+ F   ++   +I             C+ +R  E  AL  T  +   D +ALD KEYYQ+RRLK+L LD  +  ++    D   G+ R     D DW
Sbjct:   85 GLVATEKIRKGEVFLAMPYDVRYELSADLARNVVFKDVLSEDYNSWTGDAGLIALLILNEVCLAADTGLGTKEPIRQNSLQAFMSAWVAALPGPEDINHPLLWSEEDQEILQSSSTNRIYRVLDDIEEDVTWLKTNVFEKDGNRFPVSIPWNGEEIPCFSLTGFKWAMALAQSRSFFVDNAVRLLPLMDFCNHADEGTE-EARAGFMGTFGTTKGAELVAGQSYEVGEEVFICYGPKSAADYLLEHAFCPEQSWKTAVSELFFEVDPKDRFYDDKLDILEFETYDASPMDPVQSFDVVSAPGRDGEPDPFMVQFVRLCKLGATDAFLLESIFRKEVWGFMELPVSETNERDVVDAIMEACQLALDDFSKCAEGGPEI-------------CSKLRESESQALIRTRDFLRRDREALDLKEYYQQRRLKDLGLDSEWSPEDDMSPDLGFGQSRAPGGADYDW 531
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1423.2569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCQ4_9PHAE8.300e-22470.91SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZE37_9STRA3.430e-12746.56Putative ribulose-1,5-bisphosphate carboxylase/oxy... [more]
A0A6S9FGC7_HETAK1.080e-10542.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GD31_VITBC6.170e-8740.00SET domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A7S2A866_TRICV2.150e-8039.54Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2FAY5_9STRA6.310e-8040.18Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2NWX9_9STRA2.380e-7838.95Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2SPV0_9STRA1.970e-7142.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K0QYB9_THAOC8.630e-7137.66Rubis-subs-bind domain-containing protein n=1 Tax=... [more]
B7FNW3_PHATC6.670e-6936.66Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1423contigH-paniculata_contig1423:16981..26023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score676.4
Seed ortholog evalue1.2e-191
Seed eggNOG ortholog2880.D8LLW9
KEGG rclassRC01974
KEGG koko:K00592
KEGG ReactionR05179
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidyl-lysine monomethylation
EggNOG OGsKOG1337@1,KOG1337@2759
Ec32 ortholog descriptionSET domain and Rubisco LSMT substrate-binding domain protein
Ec32 orthologEc-14_001980.1
EC2.1.1.127,2.1.1.259
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons10
Model size2569
Cds size1773
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1423.2569.1prot_H-paniculata_contig1423.2569.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1423 16993..25239 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929132.9661655-UTR-H-paniculata_contig1423:16980..169921622929132.9661655-UTR-H-paniculata_contig1423:16980..16992Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1423 16981..16992 +
1691480743.686207-UTR-H-paniculata_contig1423:16980..169921691480743.686207-UTR-H-paniculata_contig1423:16980..16992Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1423 16981..16992 +
1622929133.1353085-UTR-H-paniculata_contig1423:25239..260231622929133.1353085-UTR-H-paniculata_contig1423:25239..26023Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1423 25240..26023 +
1691480743.7931354-UTR-H-paniculata_contig1423:25239..260231691480743.7931354-UTR-H-paniculata_contig1423:25239..26023Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1423 25240..26023 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929132.9875615-CDS-H-paniculata_contig1423:16992..176171622929132.9875615-CDS-H-paniculata_contig1423:16992..17617Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 16993..17617 +
1691480743.703263-CDS-H-paniculata_contig1423:16992..176171691480743.703263-CDS-H-paniculata_contig1423:16992..17617Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 16993..17617 +
1622929133.0031273-CDS-H-paniculata_contig1423:18289..184711622929133.0031273-CDS-H-paniculata_contig1423:18289..18471Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 18290..18471 +
1691480743.7134945-CDS-H-paniculata_contig1423:18289..184711691480743.7134945-CDS-H-paniculata_contig1423:18289..18471Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 18290..18471 +
1622929133.015436-CDS-H-paniculata_contig1423:18981..192131622929133.015436-CDS-H-paniculata_contig1423:18981..19213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 18982..19213 +
1691480743.722919-CDS-H-paniculata_contig1423:18981..192131691480743.722919-CDS-H-paniculata_contig1423:18981..19213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 18982..19213 +
1622929133.029005-CDS-H-paniculata_contig1423:20314..204411622929133.029005-CDS-H-paniculata_contig1423:20314..20441Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 20315..20441 +
1691480743.7311566-CDS-H-paniculata_contig1423:20314..204411691480743.7311566-CDS-H-paniculata_contig1423:20314..20441Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 20315..20441 +
1622929133.0491354-CDS-H-paniculata_contig1423:21854..219391622929133.0491354-CDS-H-paniculata_contig1423:21854..21939Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 21855..21939 +
1691480743.7410817-CDS-H-paniculata_contig1423:21854..219391691480743.7410817-CDS-H-paniculata_contig1423:21854..21939Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 21855..21939 +
1622929133.0657194-CDS-H-paniculata_contig1423:22396..224741622929133.0657194-CDS-H-paniculata_contig1423:22396..22474Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 22397..22474 +
1691480743.7515311-CDS-H-paniculata_contig1423:22396..224741691480743.7515311-CDS-H-paniculata_contig1423:22396..22474Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 22397..22474 +
1622929133.0830202-CDS-H-paniculata_contig1423:23136..232821622929133.0830202-CDS-H-paniculata_contig1423:23136..23282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 23137..23282 +
1691480743.759402-CDS-H-paniculata_contig1423:23136..232821691480743.759402-CDS-H-paniculata_contig1423:23136..23282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 23137..23282 +
1622929133.098434-CDS-H-paniculata_contig1423:23691..238241622929133.098434-CDS-H-paniculata_contig1423:23691..23824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 23692..23824 +
1691480743.7674243-CDS-H-paniculata_contig1423:23691..238241691480743.7674243-CDS-H-paniculata_contig1423:23691..23824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 23692..23824 +
1622929133.1105413-CDS-H-paniculata_contig1423:24478..245801622929133.1105413-CDS-H-paniculata_contig1423:24478..24580Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 24479..24580 +
1691480743.7756047-CDS-H-paniculata_contig1423:24478..245801691480743.7756047-CDS-H-paniculata_contig1423:24478..24580Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 24479..24580 +
1622929133.122592-CDS-H-paniculata_contig1423:25176..252391622929133.122592-CDS-H-paniculata_contig1423:25176..25239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 25177..25239 +
1691480743.783429-CDS-H-paniculata_contig1423:25176..252391691480743.783429-CDS-H-paniculata_contig1423:25176..25239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1423 25177..25239 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1423.2569.1

>prot_H-paniculata_contig1423.2569.1 ID=prot_H-paniculata_contig1423.2569.1|Name=mRNA_H-paniculata_contig1423.2569.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=591bp
MNVEKGVKKKTVGGKTGLHRIRQRSMRLSVAAFAASVTFHSQCFTQAFSF
ASKMSVQRTPNHSQGSRLSVSSTIFHDNPDYRYRSVFMLQQRPYQDCLRR
GHHHRRCRRRTISSMSTPRRVTALRMVFDPDFTPVALNLFHKWLGSQKNS
NLKIGDQIALAGRSPLDGGRGLMATKPIQNGKTVLTIPQSLALTATGLGR
SGIARYVKGFEGWTGDTGLIALQLLWERAQGDKSPIAPWIAVLPAPGELD
MPLFWDEEDLALADASSTRGMSGFSADVDEDYAWLAQNTFGANPTVFPED
KFGSADFRWAVGVALSRSFFVDGELRLTPLVDFANHASSRSMLEPIGGMT
GLLGSKAVVLRAGKDYEEGEEFFVSYGPKGAAAYLEENGFVPPLSGAELT
CELEFSIGQDDRFFDDKEDILQSQGLGTSTTFELTSVGLPDVELTKFLRL
SMINGEDAFLLEGIFRNEIWGFVAEPISKTNEAAVNNALASRCRAELEGF
HGTSDEEEDILAGKREATHRQRLCAAVRRGERLALKMTASWCDTDSKALD
RKEYYQERRLKELQLDLPFEVDEVYPLDQQAGRVRRDMDW*
back to top

mRNA from alignment at H-paniculata_contig1423:16981..26023+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1423.2569.1 ID=mRNA_H-paniculata_contig1423.2569.1|Name=mRNA_H-paniculata_contig1423.2569.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9043bp|location=Sequence derived from alignment at H-paniculata_contig1423:16981..26023+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTCCGTTTCGGATGAATGTTGAGAAGGGTGTTAAAAAAAAAACAGTTGG
TGGAAAAACTGGGCTACACCGCATCAGACAGCGAAGCATGCGTCTCTCGG
TGGCTGCTTTCGCAGCGTCGGTAACCTTCCATTCGCAATGCTTCACACAG
GCTTTCTCATTTGCCTCGAAAATGTCAGTGCAACGTACACCAAACCATAG
TCAGGGCTCAAGGTTGTCGGTCAGCAGCACTATCTTTCATGACAACCCTG
ACTACCGCTACAGGAGCGTGTTCATGTTGCAGCAGCGACCATATCAGGAC
TGTTTGCGCCGCGGCCACCACCACCGCCGCTGCCGCCGCCGCACGATTAG
CAGCATGTCAACACCACGGAGAGTCACAGCGCTGCGGATGGTCTTTGATC
CCGATTTTACACCCGTCGCACTCAACTTGTTCCACAAGTGGCTTGGCAGC
CAAAAGAACTCAAATCTAAAGATTGGTGACCAAATCGCCTTAGCAGGACG
GTCGCCTTTGGACGGGGGTCGGGGGCTGATGGCGACGAAGCCGATCCAGA
ATGGCAAGACGGTGCTAACGATTCCGCAGTCTCTGGCATTGACGGCTACG
GGCTTGGGCAGGTCTGGTATCGCACGATACGTCAAAGGTTTGTGTGTCTT
GTTGTTTGTGCTCTGTAGGATGATAAGTGCTATTGTAGTCAAGCGGTACA
GTACTGCAATTTAATGTCCTGTGATATAATAGTGCTTGCTCTTCCAGCTT
GACTGCTGCCAGTCTATGACAATACTGTACTGGCGTTTATGATCCAACCG
TCTGTTGTACATGTTGACCGGTGACAAGCTGAAGAAACACGTATCGTCAT
GTCCCTACTAAATTATGTATTACTTTACCTTATACGTGACGGCACTTATC
GACATTGCGCGTAGGTACATGGGTATCCCCACGTACATGACTAGAAAATA
TCTACAGATCGGCTCCGACCTTGCTTCACGTCTCGACGTGCCAATGTTAT
TGCGTCAACCACTTTGTGCATGGGTTTCCACAGAATCGCCGCCTCAACAA
CAGGTGAAAACAACGCCTATAGCACTACCACGGGGATAGGATACTGCCGC
CTTTTAGATAGCCAATCCTATACAGACAGTACGTTCAGCACAGACCGGGA
GTCGACATGGTTCTGCGCGCAATTTTTGCAGTGCTCCTGCGCTCTACATT
TGTGTCAAACATATATTTTTGTTCCGAAGTAGCCTCCGGTTCCCAAAAGG
TCAAGATTTGATATGAAGTGACTGCACTGTATGCCATGTACTCGATCCCC
TCGTCAAAGGGTTCGAAGGGTGGACTGGAGACACTGGCCTAATCGCGCTG
CAGTTGTTGTGGGAAAGGGCCCAGGGAGACAAATCTCCGATTGCCCCATG
GATAGCCGTCCTGCCGGCGCCTGGAGAGCTCGACATGCCGTTGTTCTGGG
ACGAGGAGGACCTCGCTCTCGCAGACGCTTCGTCGACGAGGGTGAGAGAA
ATTTGGACCTTTGAAGCCCCCCAATGATTGGAATTGTAAACAGAAATAGT
ATACTCTTATATGGCACTGCCCCCGGCTCTTTCTAATCGAGTTCGGGGAG
AGAAGACTCTTGAAGCCTGTGCTATGTTTGTTTTTTTTACCTGTGAGACG
GCGTCCTCCCATCCTGCGGTGCTTGTCCGCACTGTAGAGTACCCAGAATA
CACCATGGATTTTCCATAGCGGGTGTGCAGCTGATAGATGCATTCACCTT
AGCAGATATCACAAATATATTCGTAAACGGTGCGAGTGCAAACATGACTA
TTCCTGTTTCCTTATCTCATCATGCGTTAGTTTTGCTTGCATCACGTTTT
TCGCCTGAAACCCCCGCCCCCCCCTCCCCACCCCGGCCCACGTTGGTCAA
GTATTCCCTATTATGCCAGCTTGACCCTTCATCCACTACAACCTTCCACA
TCCGTCGCGTCTATTAAATATGCACCAATATCTTTTGCAAAACAATTGCA
GGGAATGTCAGGCTTCAGCGCCGACGTCGACGAGGACTACGCCTGGCTAG
CCCAAAACACCTTCGGGGCAAACCCGACTGTTTTCCCTGAGGACAAGTTT
GGCTCCGCTGACTTCCGCTGGGCGGTGGGGGTGGCACTTTCCCGGTCGTT
CTTCGTGGATGGAGAGCTTCGGCTGACGCCGCTCGTGGACTTCGCCAATC
ACGCCTCATCGAGGTCGATGTTGGAGCCAATCGGTGAGGGGTTCATGTAT
GTGCAACAGACATGGCATTTGCATCGTAACATGTAAGGTATAAGGCACGG
TAGACCATGCAATAAAATATGTTGCCTAAAGTAGGATGGCCGTACCAAAC
ATCGTAAGAATATGTGCTCACGACGCAAAGGCCTTCCTAAACACTAGTTG
GATACCCGTTCGCATCAGAGTGACCTTCACAAAAGTCGTCAGGACATTGA
AATACTATAACGAGCCTCTCGTACACGCAGGGCTTGTTCTATCCTATCGT
GCGTATTTTGGCATAATTAAGTAAGCCAGTAGCAACATATTGTGCGATGG
CATGTTTTCTGTTTTATAGCGTCAGACGTTTCGATGCGTTTCGATGCGTT
TCATGTTCACGGAGGCTTGATAGCACATGCTGCCCCATCTGGGGCCGCGG
GGGGAAGGGGCTGACGTGCCCCTGTGTACCACTGTTGCACTTCGAATCTC
TCGGGCACAAGATGAACCTAACTTGGGGCTAAAATAGAAATAGGCATGGT
GTCAGGCAAAACTCAAGCACTGCTAAAGACGAAAACTTTCGCCGCCTCTA
CAGTAGCAGAACACCGTTTGCTCACGTTGCGGGGGCGCCGTGTCTTGTAA
CAGCAGTGCACAGTAGTCACCACGCAACAGGCACAACAATCGCAACGCCG
CTATTTTCTCTTCCAGTGACTTGCCCCATCACTCTACAACAGAGCCCTCC
CTTTTTAGGCAGCCGAGTGTGGCGATGTGTAGACCATCTGGCGATACATG
AAGCGGCAAACGGGCTAGTTTTTTGTTCCATCTTCCTATCTTCACGTTGG
CTATCGCTCTGATAGGAACAAAGTTCCGTCGTCCCAACGATGCCTAGCGA
AGGGCTCAACAACTATGGTGTGCAAAACATAAGTAGCCTCCCCGCCCCTC
TCCCCTGCCCTTGTTAATTTCGTTGGTTCATTTGTGGAATCAGTCACTCA
GCAGTATAAAGTGCACGAGAGTACCTTCAGTTTTGATTTAATGTTATCAG
TATGTTTTCTATTTGTACGTGTATATCGTTCAATCCGTAGTTCCATGTCG
TTGAACCTTTCCCTCGCCGGCTGATTATTTACAGGCGGGATGACGGGGCT
TCTAGGTTCCAAAGCAGTCGTCCTGAGGGCGGGCAAGGATTACGAGGAGG
GCGAGGAGTTCTTTGTGAGCTACGGGCCGAAGGGCGCGGCGGCGTATCTT
GAAGAAAATGGGTATGTCTTCTAGTGGAAGGATGAGGAGAAACCAACATC
TTCATCATTTCCAGAACCATCCCATCAAAAAGTACCAGCGTGTCTCTACT
CGTGTGAGAGTACCCCTGTTAGTTTGTATATGGGATGAATCTGATCAATT
CTCCACTCTACCAGCACTCGAGGGGATCGATGTTTTTGGAGGTCACAGTC
ATGATAAATCCTATCCCATATCGCGTGATTTCTTTAGCTGCTGAGGTAGA
GCAAAACATACATTTTGTGACGGTACGTACTTCGTCGCACTTAAAAATAG
AGAAAAACTGCTGGGTGTGTGCAACAACTTGCAACATCTTCGTCGTCCGT
TGGCGGTTATCGTAGTAGCGGCGGGAGATGGCACCCCTCTTGCTGTAGCT
AAGTTGGGCGTGTGTACTCGCTTCCCAAAATGATCGGGGGACACTTTCTT
TGTTGGTTTTCCGGGACGACTTGAGGTACCTGATCATTCCTCTCGAGCCA
CTCTGGGATGCTATTAATTGAGCAAGACTCTCTCTATTCTTGCGTATCTC
CTGCGCAACCTCCTCTTGACCGGCCCAATTTTTTGTTTGTCACTGGCAAT
GGTTGAAATGGGGAAAAATATGCTCTTATGCCATCAAATTGATTGAGGCG
ACAGCTTTGCTTGCTGGTGCGGTGGTTGGTTGTGTTTGTCTGCCTGTCAT
GCTTGATGTACTGTCACCTCTCACGCTAGCAGTGCTCAAATGCCAGCGTG
CAGATAGTTCATGTCAAAACACCTCACACTCGCGAAAAAATCGGATAAAC
TTTTGAGACGATTGTTCCGAACATCACCGCCCCCCTCATTGACGTATTCA
TTACTAGCAATGAGCACAACCATTCCCACACGACGATTTTTCTAAACATC
ATTACCCTCCTCATTGATGTATTAATTACTATTATAGCAAGGAGCACAGC
CACTCCCACACGCCCATCGCCCCTTCCGGTCTACCCAACGCTCCCGTGAT
TTGCCGTCGATTTCAAAGTTGTCGTTGTCGACGTCCATTTACTTCGGGCA
GCGAACCGCTCACTGCGACTGCGAGGCCCCCTGAAGAGAGCCGCACGGAT
TGATGCGGAGCTGTCTGCTTTGGGGTATCCTTACACTATGCCAAGTTTTT
GATGCTCGCGTGGGGAAAGTCCCACCACGATGATGGTATTCAATTACCAT
TCAGCATGCATCGCGCACCTATCACAGCTCAACACTGTTACAGCTATCAC
ACATCTTACGTCGACGCCGACAGCGCTTTCGTGCGTATTTTGTACACGAG
ACAAACGAACAGAACGCGCGTGAATTGTGGAGGAATATCCGAGATGGCAT
TCCTTTTTATCTGTTCGTGTGTTGTATTTATTCCCTCCCCCCCCCGCCCC
CCCCGATGTCATGCGGTGCGCCAGGTTCGTGCCACCTTTGTCAGGGGCAG
AGCTGACGTGCGAGCTAGAGTTTTCGATCGGACAGGATGATCGTTTTTTT
GATGACAAGGTGCGACAGGGGCGGAACTTAGCGTTTCACCATGCTCTCTG
AACTAGTAGAACCGCATGACGTACCGCACTGCATATTTGTTCGTTTGGTT
TTTGTATTACGCATTGTCTGTCTCTAAACGATGCTCGCGGGAGAGGCAGC
AGGCGGGCTGCGTTGCGACCCGTATGCCATCCAGTTGGACGGTGCAGCTA
TAGTCAGCACCAAGAAAGCAGTTTTTATGCAGCGACACTGGATAGCTGCT
ACCGGGGGCAGACAACTCAATATCGTGGGATTGAGTGGTCTTTCCATCCT
GATAAGGAGCGTGCACACAGGGCCCCGTGTGCATGCCTTCTACCGCCATT
CGAAAAACAGCTTTTGTTTTACTTCTTTGAGGACTCCGCGCTTTTTGAAT
TGATGACGATATCATTGCTCGTTGTTGGGCGCCATCGGTTTTTGCACGGC
GCGTTTGATATCATAGGAGGACATATTGCAGAGCCAGGGATTAGGGACAT
CGACGACTTTCGAGCTCACGTCCGTGGGGTTGCCGGACGTCGAGGTGAGA
TGCATGTCGTGGTGCGGCGACGACTTGCTCTAGTCGTAACGACCTGTCGT
TTTGTTCAAAGGAAGTACGAACATGATCTGGTCAACATCTGATACACTGG
TATGTGGGTGTATGCTGCGGCTTGGGCATATATCATAGGCTGAATCAGGG
TATCTTGAATTTTTCCGCGGATGGTTCACCATGTCGTTCGCTTGACCATG
CACAACACATGGTTTGATCCCAATGTAACACAAAGCCTGGTATGTTTGTG
CAAGAGTCAAGAGTGATACGCGCTTCCATTGCACGTTGAAGCCCCCCGTC
TTCACATCATTATTGTTTTATGTTTCAATCGCTTTGAGTTATGCATGCAT
ATGTTTTTGTTTACAAATAGTCATACACATCTCGAGATTTCACCTCATCA
ACTGAACAAATACTTACATGTTGATTCATGAACTGCAGTCACTACATTAC
AATTGTGAGTGGCTCCCAAACCAGAGTGGTATCTCCCTACTATAGATTTA
GTCTTGTTCCATCATGGTGCAGTGTTGTACAAGTGAGGATCACGATGTTA
CAAAAATACCCCGCCCGCCCTAACCCCCCCGCCCCTCGCCCCGGCGCATT
GTGATTTGCTTACGTCAACGACAACGTCTGGCATCTCCGATGTGTCTGAC
GATCAGCTGACAAAGTTTTTACGACTGTCGATGATTAACGGGGAAGATGC
GTTTTTGCTGGAGGGTATCTTCCGGAACGAAATCTGGGGCTTCGTCGCAG
AGCCGATCAGCAAGACGAACGAGGCTGCTGTCAACAATGCCTTAGCTAGC
AGGTGCGTGACTGAAAGTACATATGCCGAATCATTTACTGAACGTTCATA
TGCAGAATTATCCAAGAAAAACGTAATGCCTGACTCGGCGCAGCATTTGG
AGCCTAACTACATGTCATGTAACCCTATTTTTTGGCTGGTTCTCCCAACC
TTTTCAACTTTCAAACATTGCCTTTTTTTTTCTTATTATCTTGGGTTTCA
CTCATTATGTTACGCTCTGTACATATGTAATTGGAGTCTTGGACCATATT
TGACGATTTTAAAAGTTAATTGTGTGTGCATGACACAACCCAAATTGATC
GGTAGATTACCAGGAATAAAAAATGTGAATGGGAGCATGTATCAAGAGTA
CCAGGCACCACCCTCTCGCCCTATGCGTGTACTTTTCCGGCTCCCTTGTT
TGCTTCAAAAGGTGTAGGGCAGAACTGGAGGGTTTCCATGGAACGTCCGA
CGAGGAGGAAGATATTCTAGCTGGTAAACGGGAAGCTACGCACCGGCAAC
GGCTCTGCGCTGCTGTTCGTCGGGGGGAGAGGCTAGCCCTAAAGGTGCAA
TGGCCCACCCGTGACCGACACAAGATTCGGTTCCATGAATTCGACATAAC
TATAAAAGTACACATGAATAAAATTGAAAATAACCGTGGGAAATATGTTG
CAACGGGGTTGACCATGAACGTGTCACCTGTGTCGATATAGTAGTGTGGG
TTGAAGCTGTCGAGACCGTGGGCGTTTCTGCCTAAGGTAGATCGAGTGGT
TAGTTCTTCCTTTGGGATGGGACGGTCAGTCGACTGGGTAGCTGACCGAC
AACAAAATGGGGACTTCAAGGCGTAGGACGTCTGCCACAAAATCGTGCTT
GTCGATTGCATGGTTTGCTTGCTTCGTTTCACGGTGGTTGTGTGCGGTAC
AGGAGGCAAGCAAAACGCATGCACAGAGCAAATCAACATGTTATTTTTTT
TTTATGTTGTTTTTTGATCGGCCAAAGTTTGCGTCTGCTCTCTTCTGCTT
GTCTTGACGCTTATTCACTTACTTGCTACTGGGAATGTGCACAATGACGA
CCTTAACTGATTCCTTGTACGGTAGCCTATTTTAGATCAGGTATAGTTGT
ATCCCTCTAGAGTCGGGGCCTTGTGGCGTTCCGTTGCAGCGTTTTTTCTT
ATGCTCGTACCGACGAGCGCTTGCGGTGTTTTTTGTTGCCTCTCGTAGAT
GACCGCGAGCTGGTGCGACACCGACAGCAAGGCGTTGGACCGGAAGGAAT
ATTACCAAGAGAGACGGCTGAAGGAGCTGCAGCTTGACCTCCCCTTCGAG
GTACGACAACATTTGTTGTCTCAAGTGTCAATATTATACTCTTGGCCTTC
CGCGTTAGGTGCCGTGGAAGGCTCTCTTCCCACGTCCTAGCTGTACCCTT
GTCGATCGTTTTTGTGTGGCTATTTTTGTTCTTGTGTCCGTTTTTTCTCC
TTCCGTGGTCGCGCGAGCTTCGTGACCAACGAAAAGTCCGTGCTGCGCTC
CTCACGTCAATCCAAAATTGGAAGATTCCTGACGTAATGGGCGAGAGTTT
GAAGTTGGACCCGTCTAGAAAGTTGTGGCGAAATAGTAAAGATGGTTGCA
ACGGTGCTGCTATGCAAGTGGCACCTTTGGTTTTCTGGTTGCCATCACAT
AAAGTTACAAGCAGTAGATCTGCTGTAGGGATCTCGAGTTCGTTTCGGCT
GTCTTTTTTCAGGTGTCACGGATCTCGCATGGCCATTTTCCACGGTGTTT
TTGTTCACCTCTCGTTCTCGCTCTCCGCATACGCCACTTTCCAACCGCCC
ATGACTCATAATTATTTGACGTTCGATTGACCCGTTTGCGATCAGTGTTT
TAATTAAGCTTTGTTCACCTTATTTTTGCTCTTTTGTTTTACCCAGGTGG
ACGAGGTGTATCCCTTGGACCAGCAGGCAGGCAGGGTGCGACGGGACATG
GACTGGTGACAGTTGGAACTTATGACACATGTAGAGCGTTGTGGCGTCAT
ATCAAAACCACGCGTTCACCCTATGCCTTTAGGCTTTGTTTGCCAAGGAA
TCGACGAGTCTCCACAGGGAAAGGATGTGGAGGATACAGGGGTACCGACT
GGTAGTACCCTGGGATTTTTTAAATTTTGCTAGAGTGTCGGTGTTGAAGT
TAGTACGAATGGACACCTTGCGCGAGGATTGTAGTGCAGCATGTTTTGTT
TTCACTAGAATTGTGCGCCAGGAGGGAGCGATGAGAGATCGCTTTTACGA
CTGGCACTTCTTTTGGGATAATCTTGAATCTTGTATCCAACTGCCGTGCG
ATTGCCCTGTTCATGTGCGTGGAGGTATGTGTGTGTTCTGCGTGTGTTTT
TGTCCAAGTCCAGCCAGTCCACATGGTGCAAATATCTGTGCTCTGGTTAT
AGCCTATGATTTCTGCTGGAGGGGACACAAAAAACGGCGATCAACACGGT
GCGTACATGCTGTGTTAAAGTGTCTACGTAGGGTCGGTATACAGATAACG
ACACCACTCAAGAAATTGGCAGTTAAGAAATTTAGGCTGGATTTTTAAAG
AATCATCAAAACAATTAATTACAACTAAGAAATTGTTCTCACTTCGAGGT
GAAAATAAGAATTAGAAATCGGCTATATAATGTCGACCTTGCAGCTTGAG
TGACTGGTTGTTCCGGCTGCGGCACAGTACCACTGTAGACCGAACGGCAG
GGGAGTCGTTTGAAGAGGGGTAACATGAATGTACTCGATGCCC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1423:16981..26023+

>mRNA_H-paniculata_contig1423.2569.1 ID=mRNA_H-paniculata_contig1423.2569.1|Name=mRNA_H-paniculata_contig1423.2569.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3546bp|location=Sequence derived from alignment at H-paniculata_contig1423:16981..26023+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATGTTGAGAAGGGTGTTAAAAAAAAAACAGTTGGTGGAAAAACTGG
GCTACACCGCATCAGACAGCGAAGCATGCGTCTCTCGGTGGCTGCTTTCG
CAGCGTCGGTAACCTTCCATTCGCAATGCTTCACACAGGCTTTCTCATTT
GCCTCGAAAATGTCAGTGCAACGTACACCAAACCATAGTCAGGGCTCAAG
GTTGTCGGTCAGCAGCACTATCTTTCATGACAACCCTGACTACCGCTACA
GGAGCGTGTTCATGTTGCAGCAGCGACCATATCAGGACTGTTTGCGCCGC
GGCCACCACCACCGCCGCTGCCGCCGCCGCACGATTAGCAGCATGTCAAC
ACCACGGAGAGTCACAGCGCTGCGGATGGTCTTTGATCCCGATTTTACAC
CCGTCGCACTCAACTTGTTCCACAAGTGGCTTGGCAGCCAAAAGAACTCA
AATCTAAAGATTGGTGACCAAATCGCCTTAGCAGGACGGTCGCCTTTGGA
CGGGGGTCGGGGGCTGATGGCGACGAAGCCGATCCAGAATGGCAAGACGG
TGCTAACGATTCCGCAGTCTCTGGCATTGACGGCTACGGGCTTGGGCAGG
TCTGGTATCGCACGATACGTCAAAGATGAATGTTGAGAAGGGTGTTAAAA
AAAAAACAGTTGGTGGAAAAACTGGGCTACACCGCATCAGACAGCGAAGC
ATGCGTCTCTCGGTGGCTGCTTTCGCAGCGTCGGTAACCTTCCATTCGCA
ATGCTTCACACAGGCTTTCTCATTTGCCTCGAAAATGTCAGTGCAACGTA
CACCAAACCATAGTCAGGGCTCAAGGTTGTCGGTCAGCAGCACTATCTTT
CATGACAACCCTGACTACCGCTACAGGAGCGTGTTCATGTTGCAGCAGCG
ACCATATCAGGACTGTTTGCGCCGCGGCCACCACCACCGCCGCTGCCGCC
GCCGCACGATTAGCAGCATGTCAACACCACGGAGAGTCACAGCGCTGCGG
ATGGTCTTTGATCCCGATTTTACACCCGTCGCACTCAACTTGTTCCACAA
GTGGCTTGGCAGCCAAAAGAACTCAAATCTAAAGATTGGTGACCAAATCG
CCTTAGCAGGACGGTCGCCTTTGGACGGGGGTCGGGGGCTGATGGCGACG
AAGCCGATCCAGAATGGCAAGACGGTGCTAACGATTCCGCAGTCTCTGGC
ATTGACGGCTACGGGCTTGGGCAGGTCTGGTATCGCACGATACGTCAAAG
GGTTCGAAGGGTGGACTGGAGACACTGGCCTAATCGCGCTGCAGTTGTTG
TGGGAAAGGGCCCAGGGAGACAAATCTCCGATTGCCCCATGGATAGCCGT
CCTGCCGGCGCCTGGAGAGCTCGACATGCCGTTGTTCTGGGACGAGGAGG
ACCTCGCTCTCGCAGACGCTTCGTCGACGAGGGGTTCGAAGGGTGGACTG
GAGACACTGGCCTAATCGCGCTGCAGTTGTTGTGGGAAAGGGCCCAGGGA
GACAAATCTCCGATTGCCCCATGGATAGCCGTCCTGCCGGCGCCTGGAGA
GCTCGACATGCCGTTGTTCTGGGACGAGGAGGACCTCGCTCTCGCAGACG
CTTCGTCGACGAGGGGAATGTCAGGCTTCAGCGCCGACGTCGACGAGGAC
TACGCCTGGCTAGCCCAAAACACCTTCGGGGCAAACCCGACTGTTTTCCC
TGAGGACAAGTTTGGCTCCGCTGACTTCCGCTGGGCGGTGGGGGTGGCAC
TTTCCCGGTCGTTCTTCGTGGATGGAGAGCTTCGGCTGACGCCGCTCGTG
GACTTCGCCAATCACGCCTCATCGAGGTCGATGTTGGAGCCAATCGGGAA
TGTCAGGCTTCAGCGCCGACGTCGACGAGGACTACGCCTGGCTAGCCCAA
AACACCTTCGGGGCAAACCCGACTGTTTTCCCTGAGGACAAGTTTGGCTC
CGCTGACTTCCGCTGGGCGGTGGGGGTGGCACTTTCCCGGTCGTTCTTCG
TGGATGGAGAGCTTCGGCTGACGCCGCTCGTGGACTTCGCCAATCACGCC
TCATCGAGGTCGATGTTGGAGCCAATCGGCGGGATGACGGGGCTTCTAGG
TTCCAAAGCAGTCGTCCTGAGGGCGGGCAAGGATTACGAGGAGGGCGAGG
AGTTCTTTGTGAGCTACGGGCCGAAGGGCGCGGCGGCGTATCTTGAAGAA
AATGGGCGGGATGACGGGGCTTCTAGGTTCCAAAGCAGTCGTCCTGAGGG
CGGGCAAGGATTACGAGGAGGGCGAGGAGTTCTTTGTGAGCTACGGGCCG
AAGGGCGCGGCGGCGTATCTTGAAGAAAATGGGTTCGTGCCACCTTTGTC
AGGGGCAGAGCTGACGTGCGAGCTAGAGTTTTCGATCGGACAGGATGATC
GTTTTTTTGATGACAAGGTTCGTGCCACCTTTGTCAGGGGCAGAGCTGAC
GTGCGAGCTAGAGTTTTCGATCGGACAGGATGATCGTTTTTTTGATGACA
AGGAGGACATATTGCAGAGCCAGGGATTAGGGACATCGACGACTTTCGAG
CTCACGTCCGTGGGGTTGCCGGACGTCGAGGAGGACATATTGCAGAGCCA
GGGATTAGGGACATCGACGACTTTCGAGCTCACGTCCGTGGGGTTGCCGG
ACGTCGAGCTGACAAAGTTTTTACGACTGTCGATGATTAACGGGGAAGAT
GCGTTTTTGCTGGAGGGTATCTTCCGGAACGAAATCTGGGGCTTCGTCGC
AGAGCCGATCAGCAAGACGAACGAGGCTGCTGTCAACAATGCCTTAGCTA
GCAGCTGACAAAGTTTTTACGACTGTCGATGATTAACGGGGAAGATGCGT
TTTTGCTGGAGGGTATCTTCCGGAACGAAATCTGGGGCTTCGTCGCAGAG
CCGATCAGCAAGACGAACGAGGCTGCTGTCAACAATGCCTTAGCTAGCAG
GTGTAGGGCAGAACTGGAGGGTTTCCATGGAACGTCCGACGAGGAGGAAG
ATATTCTAGCTGGTAAACGGGAAGCTACGCACCGGCAACGGCTCTGCGCT
GCTGTTCGTCGGGGGGAGAGGCTAGCCCTAAAGGTGTAGGGCAGAACTGG
AGGGTTTCCATGGAACGTCCGACGAGGAGGAAGATATTCTAGCTGGTAAA
CGGGAAGCTACGCACCGGCAACGGCTCTGCGCTGCTGTTCGTCGGGGGGA
GAGGCTAGCCCTAAAGATGACCGCGAGCTGGTGCGACACCGACAGCAAGG
CGTTGGACCGGAAGGAATATTACCAAGAGAGACGGCTGAAGGAGCTGCAG
CTTGACCTCCCCTTCGAGATGACCGCGAGCTGGTGCGACACCGACAGCAA
GGCGTTGGACCGGAAGGAATATTACCAAGAGAGACGGCTGAAGGAGCTGC
AGCTTGACCTCCCCTTCGAGGTGGACGAGGTGTATCCCTTGGACCAGCAG
GCAGGCAGGGTGCGACGGGACATGGACTGGTGAGTGGACGAGGTGTATCC
CTTGGACCAGCAGGCAGGCAGGGTGCGACGGGACATGGACTGGTGA
back to top