mRNA_H-paniculata_contig1422.2563.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1422.2563.1
Unique NamemRNA_H-paniculata_contig1422.2563.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: D7FVB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 6.860e-35
Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 3 
Query:  294 IPVQDVDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRFKPTILWELGQEHTGDCCTNGAVLSSTFKDLEEQTGVS 701
            +PV +VDG   T E Y H   Q WDG +L GDA  K+ KI+ LGA  G +R+R VYG+FTVFNEYEQVVWQR +K+ +L ELV+ELKL F   +VR+ FK   LW     +T DCC +  +L   F++ EE T +S
Sbjct:   93 LPVLEVDGVSWTLEEYQHRLMQRWDGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKLFFM-RFVRNGFKVPTLW-----NTDDCCDDRQLLQRVFREFEEATWIS 222
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 9.080e-33
Identity = 68/135 (50.37%), Postives = 86/135 (63.70%), Query Frame = 3 
Query:  294 IPVQDVDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRFKPTILWELGQEHTGDCCTNGAVLSSTFKDLEEQTGV 698
            +PV +VD    T E Y H   Q WDG IL GDA  K+ KI+ LGA  G +R R VYG FTVFNE EQVVWQRL+K+ +L EL +ELKLLF   +VR+ FK   LW     +T DCC +  +L    ++ EE+TG+
Sbjct:  160 LPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNECEQVVWQRLMKTGALSELAEELKLLFM-RFVRNDFKVPTLW-----NTHDCCDDRQLLQRILREFEEETGI 288
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.110e-31
Identity = 68/136 (50.00%), Postives = 90/136 (66.18%), Query Frame = 3 
Query:  294 IPVQDVDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRFKPTILWELGQEHTGDCCTNGAVLSSTFKDLEEQTGVS 701
            +PV +VDG   T E Y H   Q WDG +L+GDA  K+ KI+ LGA  G +R++ VYG+FTVFNEYEQVVWQR +K+ +L ELV+ELK  F   +VR+ FK   LW     +T DCC +  +L   F++ EE TG+S
Sbjct:  326 LPVLEVDGVGWTLEEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKPFFN-RFVRNGFKVFTLW-----NTDDCCDDRQLLQRVFREFEEATGIS 455
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: A0A6H5KYH3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH3_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 8.350e-29
Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 3 
Query:  294 IPVQDVDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRFKPTILWELGQEHTGDCCTNGAVLSSTFKDLEEQTGVS 701
            +PV +VD    T E Y H   Q WDG IL GDA  K+ KI+ L A  G +R R VYG FTVF+EYEQVVWQR +K+ +L EL +ELKL F   +VR+ FK   LW     +T DCC +  +L    ++ EE TG+S
Sbjct:   56 LPVLEVDSVDWTLEEYHHRLMQRWDGDILGGDASFKFAKIIRLRAKAGEERTRPVYGSFTVFDEYEQVVWQRPMKTGALSELAEELKLFFM-RFVRNGFKVPTLW-----NTDDCCDDLQLLQRILREFEEVTGIS 185
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: A0A6H5JMD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD0_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.370e-27
Identity = 73/183 (39.89%), Postives = 95/183 (51.91%), Query Frame = 3 
Query:  171 GRDRRESRLASAGAFWRF*RPDEVLRRGAIEVLLATHVA---CMIPVQD---VDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRFKPTILWELGQEHTGDCCTNGAVLSSTFKDLEEQTGVS 701
            G    E R      F+      E ++   + V L    +   C + V +   VD    T E Y H   Q WDG IL GDA  K+ KI+ LGA  G +R R VYG FTVFNE EQVVWQR +K+ +L EL  ELK  F   +VR+ FK   LW     +T DCC +  +L   F++ +E TG+S
Sbjct:  197 GAKAGEERTRPVYGFFTVFNEYEQVKNSPVSVALGRRHSGWGCFVQVCEDHPVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNECEQVVWQRPMKTGALSELAGELKQFFM-RFVRNGFKVPTLW-----NTDDCCDDSQLLQRIFREFDEATGIS 373
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 5.030e-25
Identity = 55/133 (41.35%), Postives = 86/133 (64.66%), Query Frame = 3 
Query:  297 PVQDVDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRFKPTILWELGQEHTGDCCTNGAVLSSTFKDLEEQTG 695
            PV   DG   TRE YL  + QL DGC LAGDA  KY K++ L A   G RAR V+GIFT+ NEY+QVV+ + + + S+++L ++LK++F   ++ H FK  +++     ++ +CC +  +L + FK++E +TG
Sbjct:  236 PVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIF-----YSDECCDDRQLLLTMFKEIELETG 363
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.320e-19
Identity = 44/68 (64.71%), Postives = 51/68 (75.00%), Query Frame = 3 
Query:  294 IPVQDVDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQV 497
            +PV +V G K TRE YLHC  Q WDG +LAGDA  K+ KI+ LGAT  G+R R V+GIFTVFNEYEQV
Sbjct:  166 LPVLEVKGVKWTREDYLHCVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTVFNEYEQV 233
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 2.480e-16
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 3 
Query:  339 YLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRFK-PTILW 608
            YL  + QL DG +LAGDA  KY K++ L     G RAR VYGIFT+ NEY+QVV+ + +K+ S+++L  +LK++F   +V H FK P IL+
Sbjct:   45 YLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKSDLKMMFVQRFVGHGFKLPVILF 135
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.460e-16
Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 3 
Query:  369 GCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRFKPTILWELGQEHTGDCCTNGAVLSSTFKDLEEQTGV 698
            G +  GDA  KY K++ L     G RAR VY IFT+ NEY QV++ +++ + S+Y+L ++LK+LF   +V H FK  +++     ++ DCC +  +L S FK++E +  V
Sbjct:   10 GHVKTGDASFKYAKVIRLATGEDGTRARPVYEIFTIMNEYNQVIFSKVMSTASVYDLKNDLKMLFVKRFVGHGFKLPVIF-----YSDDCCEDRQLLLSMFKEIESEDHV 114
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BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Match: A0A6H5L553_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L553_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.280e-15
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 3 
Query:  294 IPVQDVDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGGDRARSVYGIFTVFNEYEQV 497
            +PV +V+G K T E YL    Q WDG +LAGDA  K+ KI+ LGAT  G+R R V+GIFTVFNEYEQ+
Sbjct:  159 LPVLEVEGVKWTWEDYLPRVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTVFNEYEQI 226
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1422.2563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FVB4_ECTSI6.860e-3550.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4A9_9PHAE9.080e-3350.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQG2_9PHAE1.110e-3150.003'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KYH3_9PHAE8.350e-2948.533'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JMD0_9PHAE2.370e-2739.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV2_ECTSI5.030e-2541.353'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KE68_9PHAE1.320e-1964.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK3_9PHAE2.480e-1648.353'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JYR4_9PHAE3.460e-1638.183'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5L553_9PHAE1.280e-1558.82Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1422contigH-paniculata_contig1422:4420..5771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.2
Seed ortholog evalue9.4e-23
Seed eggNOG ortholog2880.D7FIV2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Exons4
Model size701
Cds size411
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1422.2563.1prot_H-paniculata_contig1422.2563.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1422 4892..5771 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929132.3735933-UTR-H-paniculata_contig1422:4419..45001622929132.3735933-UTR-H-paniculata_contig1422:4419..4500Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1422 4420..4500 +
1691480743.3843787-UTR-H-paniculata_contig1422:4419..45001691480743.3843787-UTR-H-paniculata_contig1422:4419..4500Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1422 4420..4500 +
1622929132.4167495-UTR-H-paniculata_contig1422:4682..48911622929132.4167495-UTR-H-paniculata_contig1422:4682..4891Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1422 4683..4891 +
1691480743.4058664-UTR-H-paniculata_contig1422:4682..48911691480743.4058664-UTR-H-paniculata_contig1422:4682..4891Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1422 4683..4891 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929132.4302552-CDS-H-paniculata_contig1422:4891..50951622929132.4302552-CDS-H-paniculata_contig1422:4891..5095Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1422 4892..5095 +
1691480743.414939-CDS-H-paniculata_contig1422:4891..50951691480743.414939-CDS-H-paniculata_contig1422:4891..5095Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1422 4892..5095 +
1622929132.4471338-CDS-H-paniculata_contig1422:5337..54731622929132.4471338-CDS-H-paniculata_contig1422:5337..5473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1422 5338..5473 +
1691480743.4238224-CDS-H-paniculata_contig1422:5337..54731691480743.4238224-CDS-H-paniculata_contig1422:5337..5473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1422 5338..5473 +
1622929132.462726-CDS-H-paniculata_contig1422:5700..57711622929132.462726-CDS-H-paniculata_contig1422:5700..5771Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1422 5701..5771 +
1691480743.4338963-CDS-H-paniculata_contig1422:5700..57711691480743.4338963-CDS-H-paniculata_contig1422:5700..5771Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1422 5701..5771 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1422.2563.1

>prot_H-paniculata_contig1422.2563.1 ID=prot_H-paniculata_contig1422.2563.1|Name=mRNA_H-paniculata_contig1422.2563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
MIPVQDVDGQKLTREYYLHCKQQLWDGCILAGDARHKYLKIVGLGATVGG
DRARSVYGIFTVFNEYEQVVWQRLLKSRSLYELVDELKLLFKCHYVRHRF
KPTILWELGQEHTGDCCTNGAVLSSTFKDLEEQTGVS
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mRNA from alignment at H-paniculata_contig1422:4420..5771+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1422.2563.1 ID=mRNA_H-paniculata_contig1422.2563.1|Name=mRNA_H-paniculata_contig1422.2563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1352bp|location=Sequence derived from alignment at H-paniculata_contig1422:4420..5771+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGGTGGACCAATTGGCTGATGACTTGGTCAATGGAAAAGGATTCTCTGC
CACAGCCCAGTACATCAAGCAGATACAACGAGTGGTCGATTGTTTCTTCC
AGCGTGTTGCCAATATGCCTTGCTTTACATCAACTACAGTTCTATTGTGC
GGTACAACAATGTAGTGCAGTAGAATACGATGCAGAATTTTTATCATGAG
GGTTTGGGTTTGACTCCAACGTTGGCACCAGCACGCAAAATATGCCACCA
TCAAACGCTGCAGGCCCACCTCCACGTTTTCATGTTGGCACAGCTGAATT
ACACGGATTCAGCTCAGCGACGCCCCGTCAAGCGTGCGCCATTGTTGATG
CAGGGCGAGACAGACGTGAGAGCAGACTTGCCAGCGCCGGAGCGTTTTGG
CGCTTTTGACGACCCGACGAAGTACTGCGGCGCGGTGCCATCGAAGTTCT
ACTCGCAACACACGTGGCATGTATGATCCCTGTACAGGATGTAGATGGCC
AGAAGTTGACAAGGGAGTACTACCTGCACTGTAAACAACAGCTGTGGGAT
GGGTGCATCCTTGCCGGGGACGCACGACACAAGTACCTGAAGATCGTAGG
TCTCGGCGCCACGGTTGGTGGGGACCGTGCGCGGTCGGTGTACGGGATAT
TCACCGTGTTCAACGAGTACGAGCAGGTACTATCACAGGACCACCCGCTT
CGTGTCTCGAGACTAGTTGTAGAGCTTCCTATATATGTTTTACTGCATCT
GTTGTGCCTCTGGAGTGCTGCTATACTTTGTCTCGCGCTTGTTGCGAGAT
TTTTCGTTTACTTCTCAAACTAAGTTCAGCCAGCTCCATTGACGCGTCGC
GCTTTTCGGAAAAAAACAACCTCTTCGTCAAATTTCTCATGGGCTCTCTG
CTGACACCTTGTTAACAGGTGGTATGGCAACGACTACTGAAGAGCAGATC
TTTGTATGAGCTCGTCGACGAGTTGAAGCTCCTCTTCAAGTGCCACTACG
TTCGTCACCGATTCAAGCCTACCATTCTGTGGGAATTAGGCCAAGAGCAC
ACTGGTGCGTACTGATATATGTATATATTGGACATTGCTTGTCGGGGTCA
TGGCTGGGTTTGGTATTCAAAAGGTCAGAAGTTTTCCCTCCTTGTTTGTG
CCGCACTTAGGACACGGGCGGTGGATCATTTCATAATATTTCTCGTGCCA
ATTGAGGAGACGAAGCTGTTCGAAGTATAGTTATTTACAGTGTGTTGTCA
CTACGTGCCTCTTGCTTCCTTTCCTCTGCAGGTGACTGCTGCACGAACGG
AGCTGTTCTTTCCAGTACGTTCAAAGACTTGGAGGAACAGACGGGGGTGA
GC
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Coding sequence (CDS) from alignment at H-paniculata_contig1422:4420..5771+

>mRNA_H-paniculata_contig1422.2563.1 ID=mRNA_H-paniculata_contig1422.2563.1|Name=mRNA_H-paniculata_contig1422.2563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at H-paniculata_contig1422:4420..5771+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCCCTGTACAGGATGTAGATGGCCAGAAGTTGACAAGGGAGTACTA
CCTGCACTGTAAACAACAGCTGTGGGATGGGTGCATCCTTGCCGGGGACG
CACGACACAAGTACCTGAAGATCGTAGGTCTCGGCGCCACGGTTGGTGGG
GACCGTGCGCGGTCGGTGTACGGGATATTCACCGTGTTCAACGAGTACGA
GCAGATGATCCCTGTACAGGATGTAGATGGCCAGAAGTTGACAAGGGAGT
ACTACCTGCACTGTAAACAACAGCTGTGGGATGGGTGCATCCTTGCCGGG
GACGCACGACACAAGTACCTGAAGATCGTAGGTCTCGGCGCCACGGTTGG
TGGGGACCGTGCGCGGTCGGTGTACGGGATATTCACCGTGTTCAACGAGT
ACGAGCAGGTGGTATGGCAACGACTACTGAAGAGCAGATCTTTGTATGAG
CTCGTCGACGAGTTGAAGCTCCTCTTCAAGTGCCACTACGTTCGTCACCG
ATTCAAGCCTACCATTCTGTGGGAATTAGGCCAAGAGCACACTGGTGGTA
TGGCAACGACTACTGAAGAGCAGATCTTTGTATGAGCTCGTCGACGAGTT
GAAGCTCCTCTTCAAGTGCCACTACGTTCGTCACCGATTCAAGCCTACCA
TTCTGTGGGAATTAGGCCAAGAGCACACTGGTGACTGCTGCACGAACGGA
GCTGTTCTTTCCAGTACGTTCAAAGACTTGGAGGAACAGACGGGGGTGAG
CGTGACTGCTGCACGAACGGAGCTGTTCTTTCCAGTACGTTCAAAGACTT
GGAGGAACAGACGGGGGTGAGC
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