mRNA_H-paniculata_contig1415.2527.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: D7G011_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G011_ECTSI) HSP 1 Score: 145 bits (365), Expect = 1.350e-38 Identity = 65/79 (82.28%), Postives = 72/79 (91.14%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 MIW+HGFHLAILP FL+R VKVARIGLFLH+PFPP EVFRALP R++LLRGMLGADQVGFHRF D +HF +SCRRLLGL Sbjct: 226 MIWIHGFHLAILPAFLDRTVKVARIGLFLHTPFPPGEVFRALPHREDLLRGMLGADQVGFHRFSDSQHFMTSCRRLLGL 304
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: A0A7S1VW85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VW85_9STRA) HSP 1 Score: 119 bits (299), Expect = 8.450e-31 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 +IW+HGFHL ILP FL RR+ +A+IG+FLH+PFP SE+FR L R++LLRGML ADQVGFH F RHF + CRRLLGL Sbjct: 2 LIWIHGFHLMILPSFLTRRISMAKIGIFLHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTCCRRLLGL 80
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: A0A7S2PH62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PH62_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.330e-30 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 +IW+HGFHL ILP FL RR+ +A+IG+FLH+PFP SE+FR L R++LLRGML ADQVGFH F RHF + CRRLLGL Sbjct: 142 LIWIHGFHLMILPSFLTRRISMAKIGIFLHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTCCRRLLGL 220
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: K0R7L2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R7L2_THAOC) HSP 1 Score: 117 bits (294), Expect = 3.750e-30 Identity = 52/79 (65.82%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 +IW+HGFHL ILP FL RR+ +A+IG+F H+PFP SE+FR L R++LLRGML ADQVGFH F RHF + CRRLLGL Sbjct: 96 LIWIHGFHLMILPSFLTRRIPMAKIGIFFHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTCCRRLLGL 174
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: D7FL73_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL73_ECTSI) HSP 1 Score: 120 bits (301), Expect = 5.860e-30 Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 MIWVHGFHL +LP FL R ++ AR+GLFLH+PFP SE+FR LP R++LLRGML ADQ+GFH F RHF + C+R+LGL Sbjct: 277 MIWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYARHFITCCKRILGL 355
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: V5K3Y9_SACJA (Trehalose-6-phosohate synthase n=1 Tax=Saccharina japonica TaxID=88149 RepID=V5K3Y9_SACJA) HSP 1 Score: 120 bits (300), Expect = 8.010e-30 Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 M+WVHGFHL +LP FL R ++ AR+GLFLH+PFP SE+FR LP R++LLRGML ADQ+GFH F RHF + C+R+LGL Sbjct: 317 MVWVHGFHLLLLPSFLTRVLRTARVGLFLHTPFPSSEIFRTLPFREDLLRGMLNADQIGFHLFEYARHFLTCCKRILGL 395
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: B8BYN3_THAPS (Trehalose-6-phosphate synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYN3_THAPS) HSP 1 Score: 119 bits (299), Expect = 1.070e-29 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 +IW+HGFHL ILP FL RR+ +A+IG+FLH+PFP SE+FR L R++LLRGML ADQVGFH F RHF + CRRLLGL Sbjct: 132 LIWIHGFHLMILPSFLTRRISMAKIGIFLHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTCCRRLLGL 210
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: A0A1Z5JS81_FISSO (Trehalose 6-phosphate synthase/phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS81_FISSO) HSP 1 Score: 119 bits (299), Expect = 1.090e-29 Identity = 52/79 (65.82%), Postives = 65/79 (82.28%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 ++WVHGFHL ILP +L RR+ +A++G+FLH+PFP SE+FR L R++LLRGML ADQVGFH F RHF +SCRRLLGL Sbjct: 426 LVWVHGFHLLILPSYLTRRIPMAKVGIFLHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTSCRRLLGL 504
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: A0A7S2GVR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GVR7_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.190e-29 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 +IW+HGFHL ILP FL RR+ +A+IGLFLH+PFP SE+FR L R++LLRGML +DQVGFH F RHF + CRRLLGL Sbjct: 91 LIWIHGFHLLILPSFLTRRIPMAKIGLFLHTPFPSSEIFRTLWCREDLLRGMLNSDQVGFHLFEYARHFLTCCRRLLGL 169
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Match: B7G068_PHATC (Bifunctional trehalose-6-phosphate synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G068_PHATC) HSP 1 Score: 119 bits (298), Expect = 1.490e-29 Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 1 Query: 1 MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRGMLGADQVGFHRFIDGRHFTSSCRRLLGL 237 ++W+HGFHL ILP +L RR+ +A++G+FLH+PFP SE+FR L R++LLRGML ADQVGFH F RHF +SCRRLLGL Sbjct: 432 LVWIHGFHLLILPSYLTRRIPMAKVGIFLHTPFPSSEIFRTLWCREDLLRGMLNADQVGFHLFEYARHFLTSCRRLLGL 510 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1415.2527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1415.2527.1 >prot_H-paniculata_contig1415.2527.1 ID=prot_H-paniculata_contig1415.2527.1|Name=mRNA_H-paniculata_contig1415.2527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp MIWVHGFHLAILPGFLERRVKVARIGLFLHSPFPPSEVFRALPQRKELLRback to top mRNA from alignment at H-paniculata_contig1415:2327..4262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1415.2527.1 ID=mRNA_H-paniculata_contig1415.2527.1|Name=mRNA_H-paniculata_contig1415.2527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1936bp|location=Sequence derived from alignment at H-paniculata_contig1415:2327..4262- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1415:2327..4262- >mRNA_H-paniculata_contig1415.2527.1 ID=mRNA_H-paniculata_contig1415.2527.1|Name=mRNA_H-paniculata_contig1415.2527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at H-paniculata_contig1415:2327..4262- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |