mRNA_H-paniculata_contig14114.2512.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: D7G7E8_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E8_ECTSI) HSP 1 Score: 216 bits (549), Expect = 4.490e-67 Identity = 112/163 (68.71%), Postives = 124/163 (76.07%), Query Frame = 1 Query: 1 SVNPTSPPTQAGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLPEYLESMSGEGGRIGGRGMRAGRKSGQLGVSLEECIGLFCEVETLEG 489 S+ P TQ GESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVP+A+RKYVEAKEAK+GE EE+VA +AWKGYLERNRSIIVDLFQGQLRSALQC VCG+ SV+FDPFMYLSVPLPE + G+SLE CI +FCE E L+G Sbjct: 91 SLRPGDFKTQVGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPNADRKYVEAKEAKEGEAEEMVAMQAWKGYLERNRSIIVDLFQGQLRSALQCSVCGRRSVTFDPFMYLSVPLPEDMXXXXXXXXXXXXXXXXXXXXXXGPGISLEACIRMFCEEEVLDG 253
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: A0A835Z5P0_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P0_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.290e-39 Identity = 82/149 (55.03%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 43 MPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLPEYLESMSGEGGRIGGRGMRAGRKSGQLGVSLEECIGLFCEVETLEG 489 MP F GY Q DV EFLAFLLDAVHEDLNRV +A AREAW+GYL RN+ IIVDLFQGQLRS+LQC C +SV+FDPFMYLSVP+P S SG+GG SLE CI LFCE E+L G Sbjct: 78 MPHFQGYAQHDVHEFLAFLLDAVHEDLNRVEAA-------------------AREAWRGYLLRNKPIIVDLFQGQLRSSLQCRRCLHTSVTFDPFMYLSVPMPRDSGSSSGDGGGSA--------------PSLERCIELFCEEESLSG 193
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: A0A7S4FZB2_9EUGL (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FZB2_9EUGL) HSP 1 Score: 138 bits (348), Expect = 7.970e-35 Identity = 71/116 (61.21%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 1 SVNPTSPPTQAGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPL 348 SV+P+S T P F+GY+Q D QE +AFLLD +HEDLNRV ++ YVEAK++ +G P+++VA EAW+G+L+RN+SI+VDLFQGQL+SALQC VC SV+FDPFMYLSVPL Sbjct: 415 SVSPSSFKTTLARFAPQFSGYQQHDSQELIAFLLDGIHEDLNRVK--QKAYVEAKDS-NGRPDDVVADEAWEGHLKRNQSIVVDLFQGQLKSALQCPVCDNLSVTFDPFMYLSVPL 527
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: A0A812V5A1_SYMMI (USP8 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V5A1_SYMMI) HSP 1 Score: 128 bits (321), Expect = 8.300e-33 Identity = 78/164 (47.56%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 1 SVNPTSPPTQAGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLPEYLESMSGEGGRIGGRGMRAGRKSGQLGVSLEECIGLFCEVETLEGG 492 S++PTS G P F+GY+Q D QE LAFLLD +HEDLNRV + + YVE E+ + EP E VA E+WK YL RNRSIIVD+FQGQLR+ L C C +S FDPFMY+SVP+P+ GR+ V L +C+ FC E L G Sbjct: 70 SISPTSFKRALGTFWPQFSGYDQHDAQELLAFLLDGLHEDLNRVVN--KPYVEDVESDNREPAE-VAVESWKAYLLRNRSIIVDIFQGQLRNVLCCLDCKYTSYKFDPFMYMSVPIPK-------------------GRQ-----VHLHDCLDEFCRPEILSQG 206
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: A0A7S2Y964_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y964_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.020e-32 Identity = 72/163 (44.17%), Postives = 94/163 (57.67%), Query Frame = 1 Query: 1 SVNPTSPPTQAGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLPEYLESMSGEGGRIGGRGMRAGRKSGQLGVSLEECIGLFCEVETLEG 489 S+ P+ Q GE P F GY+Q D QE LAF+LD +HEDLNRV ++ Y+E K+ GE +E A EAWK YL RN+SI+VD+FQGQL+S L C VCG +V F+PFMYLS+P+ G S+ +C+ LF E L+G Sbjct: 64 SIKPSKFKKQLGEFAPQFQGYQQHDAQELLAFMLDGIHEDLNRVK--QKPYIEDKDC-TGENDEQDAMEAWKNYLLRNKSIVVDIFQGQLKSRLTCLVCGHINVRFEPFMYLSLPI-------------------------GPKCRSVPDCMKLFLAPEILKG 198
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: A0A4Y2TB50_ARAVE (Ubiquitinyl hydrolase 1 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2TB50_ARAVE) HSP 1 Score: 126 bits (317), Expect = 1.940e-32 Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 34 GESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLP 351 G P F+GY+QQD QE +AFLLD +HEDLNRV + Y+E ++A DG P+ELVA+EAW+ YL+RN S+IVD+F G L+S L C C K S++FDPF YLS+PLP Sbjct: 102 GRFAPQFSGYQQQDCQELMAFLLDGLHEDLNRVKK--KPYIEQQDA-DGRPDELVAKEAWENYLKRNNSVIVDIFHGLLKSTLVCPECTKVSITFDPFCYLSLPLP 204
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: A0A2G9P1R3_LITCT (USP domain-containing protein (Fragment) n=2 Tax=Tetrapoda TaxID=32523 RepID=A0A2G9P1R3_LITCT) HSP 1 Score: 124 bits (311), Expect = 3.710e-32 Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = 1 Query: 4 VNPTSPPTQAGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLP 351 V P + TQ G P F+GY+QQD QE LAFLLD +HEDLNR+ ++ Y++ K+A +G P+E+VA EAW+ +++RN SIIVD+F G +S L C C K SV+FDPF YL++PLP Sbjct: 114 VTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRI--RKKPYIQLKDA-EGRPDEVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPECSKISVTFDPFCYLTLPLP 226
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: A0A7J7ZAH1_MYOMY (Ubiquitin specific peptidase 15 n=1 Tax=Myotis myotis TaxID=51298 RepID=A0A7J7ZAH1_MYOMY) HSP 1 Score: 121 bits (304), Expect = 6.140e-32 Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 4 VNPTSPPTQAGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLP 351 V P + TQ G P F+GY+QQD QE LAFLLD +HEDLNR+ ++ Y++ K+A DG +++VA EAW+ +L+RN SIIVD+F G +S L C C K SV+FDPF YL++PLP Sbjct: 24 VTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRI--RKKPYIQLKDA-DGRADKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPKCDKISVTFDPFCYLTLPLP 136
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: A0A7S2RN20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RN20_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.500e-32 Identity = 65/141 (46.10%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 67 QQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLPEYLESMSGEGGRIGGRGMRAGRKSGQLGVSLEECIGLFCEVETLEG 489 Q+D QEFLA+LLD++HEDLNRVPS ++ Y+++ K+G +E A AW+ YL+RN+SIIVDLFQGQLRS L C C ++ FDPFMYLS+P+ + L S + + +SL++C+ LF E L G Sbjct: 85 QEDAQEFLAYLLDSIHEDLNRVPSNKKIYIDSLNLKEGATDEEHAVIAWESYLKRNKSIIVDLFQGQLRSTLICLTCHNKNILFDPFMYLSIPVNKDLMSDTHD----------------NKNISLDDCLDLFLSEEHLVG 209
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Match: UPI000C6EDEA8 (ubiquitin carboxyl-terminal hydrolase 32-like isoform X1 n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6EDEA8) HSP 1 Score: 125 bits (313), Expect = 8.590e-32 Identity = 64/106 (60.38%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 34 GESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKYVEAKEAKDGEPEELVAREAWKGYLERNRSIIVDLFQGQLRSALQCGVCGKSSVSFDPFMYLSVPLP 351 G+ P F G++Q D QE LAFL+D +HEDLNRV E+ YVE K++ DG P+E VA+EAW+ ++ RNRSIIVDLF GQL+S + C VCG +SV FDPF YLS+PLP Sbjct: 68 GKYAPRFNGFQQHDSQELLAFLMDGLHEDLNRVH--EKPYVELKDS-DGRPDEEVAKEAWENHIIRNRSIIVDLFHGQLQSTVTCKVCGHNSVRFDPFNYLSLPLP 170 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14114.2512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14114.2512.1 >prot_H-paniculata_contig14114.2512.1 ID=prot_H-paniculata_contig14114.2512.1|Name=mRNA_H-paniculata_contig14114.2512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp SVNPTSPPTQAGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPSAERKback to top mRNA from alignment at H-paniculata_contig14114:5411..6505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14114.2512.1 ID=mRNA_H-paniculata_contig14114.2512.1|Name=mRNA_H-paniculata_contig14114.2512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1095bp|location=Sequence derived from alignment at H-paniculata_contig14114:5411..6505- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14114:5411..6505- >mRNA_H-paniculata_contig14114.2512.1 ID=mRNA_H-paniculata_contig14114.2512.1|Name=mRNA_H-paniculata_contig14114.2512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at H-paniculata_contig14114:5411..6505- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |