prot_H-paniculata_contig141.2502.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig141.2502.1
Unique Nameprot_H-paniculata_contig141.2502.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length289
Homology
BLAST of mRNA_H-paniculata_contig141.2502.1 vs. uniprot
Match: D8LQP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQP8_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 1.600e-81
Identity = 129/187 (68.98%), Postives = 155/187 (82.89%), Query Frame = 0
Query:  103 ALLSSRPRGAMSATRLWMSM-PSPPVKPPKKRGWGGGGSGDELYVRELVDPEKSELLAKWRAYAKADGGEKFSETLNIINDMIAFKSGVVAARKRQFTLACCKGTAILAVACVQIGPKNDSVRSFLAQDACMSLRLLTVDPASPKFKAGAHLCKELKEIGKLENMAVSFQPIKNIYSGRFYVATLTM 288
            A+ SS  RG +S  RL MSM PSPPVKP          +GDEL+VREL++PEKS +L  WR YA+ DGGEKF+E + I+N M+A++SGVVAARKR+FTLACCKG+++ AVACVQIGPKN+SVRSFLAQ+ACMS+ LL VDP+SPKFKAGAHLC+E+K+IGKLENMAVSF PIK+IYSGRFY ATL M
Sbjct:   76 AVTSSPRRGPIS--RLSMSMSPSPPVKPXXXXXXXXXXNGDELFVRELIEPEKSVILTSWRDYAQRDGGEKFAECIEILNKMVAWRSGVVAARKRRFTLACCKGSSVQAVACVQIGPKNESVRSFLAQEACMSVCLLNVDPSSPKFKAGAHLCREIKDIGKLENMAVSFDPIKDIYSGRFYAATLAM 260          
BLAST of mRNA_H-paniculata_contig141.2502.1 vs. uniprot
Match: A0A835YR80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR80_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.520e-37
Identity = 70/173 (40.46%), Postives = 107/173 (61.85%), Query Frame = 0
Query:  120 MSMPSPPVKPPKKRGWGGGGSGDELYVRELVDPEKSELLAKWRAYAKADGGE----KFSETLNIINDMIAFKSGVVAARKRQFTLACCKGTAILAVACVQIGPKNDSVRSFLAQDACMSLRLLTVDPASPKFKAGAHLCKELKEIGKLENMAVSFQPIKNIYSGRFYVATLTM 288
            M+  SPP KPP+ + +GGGG+  + Y+R++ D EK  +L  W  Y++    E    +  E + +   M A++ G   ARKR+F LA C+G  + AV CVQIGP N S  +F+ QD  M++  + V P+  K  AG  L K+LKEIG+ + + V F+P+K +Y GRFY+A+++M
Sbjct:    1 MASISPPTKPPELKKYGGGGN--DPYIRDIDDEEKQLVLGGWIGYSRRIAMEEEDPRLEEFMQVCRKMQAWRRGTGGARKRRFALAACQGDNVDAVVCVQIGPDNRSFAAFITQDMVMTVGFIAVSPSRAKLGAGTFLVKQLKEIGRAQGIRVDFEPLKEVYKGRFYLASISM 171          
BLAST of mRNA_H-paniculata_contig141.2502.1 vs. uniprot
Match: A0A7S3ZEQ8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZEQ8_9EUKA)

HSP 1 Score: 80.5 bits (197), Expect = 6.230e-15
Identity = 46/159 (28.93%), Postives = 81/159 (50.94%), Query Frame = 0
Query:  136 GGG------GSGDELYVRELVDPEKSELLAKWRAYAKADGGEKFSETLNIINDMIAFKSGVVAARKRQFTLACCKGTAILAVACVQIGPKNDSVRSFLAQDACMSLRLLTVDPASPKFKAGAHLCKELKEIGKLENMAVSFQPIKNIYSGRFYVATLTM 288
            GGG      G   E+ V  L D ++ E L  W       G +    +   +  MI + SGV   +KR+F+LA  +  A+ A+  + +GP N  + SFL +   +++  + + P +P    G+ L + +KE+ + +   VS++P+K+I SG FY+   T+
Sbjct:    1 GGGDRELEDGGNQEVIV--LSDEDRKECLKFWMDLVDRKGAKGMQGSREAMTKMITWNSGVAGVKKRRFSLAVVREGAVDAIVSLHLGPDNSDLWSFLGERYVLTVDSIVLSPTNPVKWTGSKLLRAVKELAEKKRWRVSWEPLKDINSGIFYMTAKTL 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig141.2502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQP8_ECTSI1.600e-8168.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YR80_9STRA1.520e-3740.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ZEQ8_9EUKA6.230e-1528.93Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..288
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.751

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig141contigH-paniculata_contig141:2978..10356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig141.2502.1mRNA_H-paniculata_contig141.2502.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig141 2942..11809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig141.2502.1 ID=prot_H-paniculata_contig141.2502.1|Name=mRNA_H-paniculata_contig141.2502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp
MRACSARGSGPRRATATLLFSLLFQIALSFHQPPLASFHVAKVNRHSLVV
SSSSRSHFVPPRTAQSCCNNIGSGAVNTPPVFATYSQTPPFACTARKRCP
PVALLSSRPRGAMSATRLWMSMPSPPVKPPKKRGWGGGGSGDELYVRELV
DPEKSELLAKWRAYAKADGGEKFSETLNIINDMIAFKSGVVAARKRQFTL
ACCKGTAILAVACVQIGPKNDSVRSFLAQDACMSLRLLTVDPASPKFKAG
AHLCKELKEIGKLENMAVSFQPIKNIYSGRFYVATLTM*
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