mRNA_H-paniculata_contig14095.2498.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig14095.2498.1 vs. uniprot
Match: D7FPZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ0_ECTSI) HSP 1 Score: 582 bits (1499), Expect = 5.140e-191 Identity = 377/928 (40.62%), Postives = 509/928 (54.85%), Query Frame = 1
Query: 1 MSERDLQQVELQYMRLEDAEAVYISKFEEAKRRKQDYSTYYSLAQQYGPLLDTDFAMAVYPGKVYAGKVSDAARWVHNWWWSAWPPVLRQRKAAALTIQSVFRGFVQRKKWHGIIRLRTLWGNTRITAHVFVSWRDHVAKLRRVAAFTCCFQKRCAGRCLAAWRGFVDAQRRQRENVVFRRLKQVKDGIRARVFEGWDERLGLLVEAEQARRDRLQAKLDEHILHMQDKATAFLRTPAGEAAVSDLVRVMDKINFKIFGPQNTTKTEARQEVIRRFISHEKASLRHDFNAEWPPA-FRCPHA-ACNATFVDPGHCARHAADAHAKDTPGIWELGLCLSESASLAIFESYLSKLGETI-----------IHSEGQRIGASSLRNKDPSS-----VHRRLDLWKATVRWRAVPSCSPHYSGLTAAVCELLPVTSNKTTKEST-IDEGGQSHHPR--ELSNTMHKGRA--EVDSGRWGMGMSMAEVGKTNSDRNNMFEYAVDPLILEQASWQALVDLHEV-VGKGFLRSTPYLQYLDSSGKPVREAIAMTAADIASRKRAEWLKEARTLQAAAFHRNKEMDIDRMAEEALALALEGQGDTGIFESLVDDQVVLLAVVILAERGAFAKVISAVWKEAVDEAARQHSREERRITPEVAEALSKAGYSIARSIVMDKLIDECVTDLTKPGGEMWPDKRATTAVADGIVYRVRDAIMTETIDTLLAELLASGDAASLMSAAALQRRERDS--RQGRQTS-----------IVAVDNRILPVEANFSGEGLYGEAKSRWEVGQSEEDWGNPSNRRVAIESDVDTGSWTTEPLAECHDDDGSSNTNDFQQTAPETIDRVR-SKARKTITISASEEQAAVMLQSAFRRKAVYRRTKALIATNFVKLFDPMSGSLYWYNQKTGESSWDKPPIIDLFFCK 2670
M+E D+Q+VEL MRLEDAEA +SK EEA+RRKQDYSTYY LA +YGPL F +A YPG Y GK+ DA R + WWWS WPP+LR RKAAAL IQS FRGF+QR+KW IIRLRTLWGNTRI H FV WR + RV FT R GR A +R RE ++ +R+++V +G+R RVFE WD R+ L++ EQ R DRL+A LD H ++ A AFL T AG+ AV+ + P + ++ EA+QE++RRF+ E+A +RHDFN PP CP + +C+ATFVD GH RHAAD H D+PG+ EL + + + LA+FE ++ S+ Q S + P+S LD+WKA WR + S + L A+ +L T + + GG+ EL T H G+ ++ GR ++ S + V+P LE+AS++A+ L E VG FL S+ Y YLD KP+R A+ +A+IA+ + AEW EA +L+ AA R +E ++ +A +A L L+G + L+DDQ LLAVVI+AER FAKVISAVW E VDEAA + E+R I P VA ALS+A S ARS +MD+LID+C DLT P G++W D R AVADG+ Y+VR +M+E +D ++EL ASG+A LMS AAL RR R+ R+G + +VA V + +D G L E DG + ++DR S R ++ + +E +AAV++QSA RRKA YR K ++A NF++++DP G+ YWYNQ T ES+WDKP IIDL+F K
Sbjct: 1 MAEADVQKVELDQMRLEDAEATTLSKLEEAQRRKQDYSTYYGLAVRYGPLPGEKFDLATYPGSHYHGKILDATRVIQIWWWSVWPPLLRHRKAAALAIQSQFRGFLQRQKWRAIIRLRTLWGNTRIVTHSFVVWRITITTALRVKTFTGRLSNRRKGRVFGALLSNAQERRAAREELLRQRIRRVSEGVRLRVFESWDFRVRGLIDVEQRRLDRLRAALDRHTPSIKKNALAFLGTAAGKEAVASTLATAP--------PASESEAEAKQEMVRRFVWREQALMRHDFNTTSPPPPLCCPRSDSCDATFVDRGHALRHAADVHPTDSPGVAELSVTMRDPVGLAVFEEFVEAAAVAAEPDGKGSFTRQASSDEQPPVKQSDQGSTPASSVGAAARDTLDVWKAIQAWRLISSDQKRFQQLGEAI--ILSRTKYPHLPDDVRVALGGEQLRRLFGELGAT-HGGKPNKKLLPGRGNHTSTLQRPSPPRSGDDARVTTVVEPSALEEASFRAVAFLSECQVGLAFLGSSAYRTYLDGVHKPMRNAVEAASAEIAAAEEAEWAAEAHSLRKAALDREQEAQVECLANQATRLVLQGAVGASLLGGLIDDQASLLAVVIIAERSTFAKVISAVWNETVDEAAHLIALEDREIDPGVASALSEAACSFARSRIMDELIDQCGVDLTGPEGDLWADARPMEAVADGLGYQVRSKVMSELVDEAVSELAASGEAEELMSEAALARRRREDELREGGEAKDEADGIAGAGDVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVLVGADEVRGG-----LEEAGGTDG-------EGRRESSVDRTGGSSGRSSVGSTLAETEAAVLMQSALRRKAAYREMKKVVAQNFIRMYDPGEGAFYWYNQATMESTWDKPVIIDLYFKK 905
BLAST of mRNA_H-paniculata_contig14095.2498.1 vs. uniprot
Match: A0A6H5JX87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX87_9PHAE) HSP 1 Score: 494 bits (1271), Expect = 9.070e-156 Identity = 361/1037 (34.81%), Postives = 477/1037 (46.00%), Query Frame = 1
Query: 76 KFEEAKRRKQDYSTYYSLAQQYGPLLDTDFAMAVYPGKVYAGKVSDAARWVHNWWWSAWPPVLRQRKAAALTIQSVFRGFVQRKKWHGIIRLRTLWGNTRITAHVFVSWRDHVAKLRRVAAFTCCFQKRCAGRCLAAWRGFVDAQRRQRENVVFRRLKQVKDGIRARVFEGW----------------------------------------------------------------------------------------------------------------------------------DERLGLLVEAEQARRDRLQAKLDEHILHMQDKATAFLRTPAGEAAVSDLVRVMDKINFKIFGPQNTTKTEARQEVIRRFISHEKASLRHDFNAEWPPA-FRCPHA-ACNATFVDPGHCARHAADAHAKDTPGIWELGLCLSESASLAIFESYLSKLGETIIHSEGQRIGASSLRNKDPSSVHRR-----------------LDLWKATVRWRAVPSCSPHYSGLTAAVC----------ELLPVTSNKTTKESTIDEGGQSHHPRELSNTMHKGRAEVDSGRWGMGMSMAEVGKTNSDRNNMFEYAVDPLILEQASWQALVDLHEV-VGKGFLRSTPYLQYLDSSGKPVREAIAMTAADIASRKRAEWLKEARTLQAAAFHRNKEMDIDRMAEEALALALEGQGDTGIFESLVDDQVVLLAVVILAERGAFAKVISAVWKEAVDEAARQHSREERRITPEVAEALSKAGYSIARSIVMDKLIDECVTDLTKPGGEMWPDKRATTAVADGIVYRVRDAIMTETIDTLLAELLASGDAASLMSAAALQRRERDS--RQGRQTSIVA---------VDNRILPVEANFSGEGLYGEAKSRWEVGQSEEDWGNPSNRRVAIESDVDTGSWTTEPLAECHDDDGSSNTNDFQQTAPETIDRVR-SKARKTITISASEEQAAVMLQSAFRRKAVYRRTKALIATNFVKLFDPMSGSLYWYNQKTGESSWDKPPIIDLFFCK 2670
+FEEA+RRKQDY TYY LA +YGPL F A YPG Y GKV DA R + WWWSAWPP+LR RKAAAL IQS FRGF+QR+KW IIRLRTLWGNTRI H FV WR + RV AFT R GR A +R RE ++ + +++V +G+R RVFE W D R+ L++ EQ R DRL+A LD H +++ A AFL T AG+ AV+ + P + ++ EA+QE+++RF+ E+A +RHDFN WPP CP + +C+ATFVD GH RHAAD H D PG+ EL + + + LA+FE ++ K +G+ + + V +R LD+WKA WR V S + L A+ + + V E G H + + GRA S R + G + VDP LE+AS++A+V L + VG FL S PY YLD KP R+A+ AA+IA+ + AEW EAR+L+ AA R +E ++ +A +A L L+G + L+DDQ LLAVVI+AER FAKVISAVW E VDEAA + E R I P VA ALS+A S+ARS +MD+LID+C DLT P G++W D R T AVADG+ Y+V + EL ASG+A LMS AAL RR R+ R+G + + A V + +D G L E DG + +IDR S R + +E +AAV++QSA RRKA YR K ++A NF++++DP G+ YWYNQ T ES+WDKP IIDL+F K
Sbjct: 21 RFEEAQRRKQDYGTYYGLAVRYGPLPGDQFDHATYPGSHYHGKVLDATRIIQIWWWSAWPPLLRHRKAAALVIQSQFRGFLQRRKWRAIIRLRTLWGNTRIVTHSFVVWRTTITTALRVKAFTGRLSNRRRGRIFVALLSNAQERRATREELLRQCIRRVSEGVRLRVFESWVRYTETSLAVERLRFRSVARRWFREWRDVALEDRIRSRMDWACSTLASRLLRWKHRSRYVRVRKSCVKMQVVVKMKKSCARRKRKVKASRVRRAEETVQKLKVQRSTFDSSILVLLVSTVCTLTSVTRTKDVRVRGLIDVEQRRLDRLRATLDRHTPSIKENALAFLGTAAGKEAVASRLATAP--------PASESEAEAKQEMVQRFVWREQALIRHDFNTTWPPPPLCCPRSDSCDATFVDRGHALRHAADVHPTDPPGVAELSVTMRDPVGLAVFEEFV-KAAAAAAEPDGKGSSTRQASSDEQPPVKQRNQGFTPDSSVGAAARDTLDVWKAIQAWRLVSSDQKRFQQLGEAIIVSRTKYPHLPDDVRVAIGGDQLRRLFGELGAKHGAKPNKKLL-PGRANHSSTRQRPSPPRSGDGARVT--------TVDPSALEEASFRAVVFLSKCQVGLAFLGSAPYRTYLDGVHKPTRDAVEAAAAEIAAAEEAEWAAEARSLRKAALDREQEAQVESLANQATRLVLQGAVGASLLGGLIDDQASLLAVVIIAERSTFAKVISAVWNETVDEAAHLIALENREIDPRVASALSEAACSLARSRIMDELIDQCGVDLTGPEGDLWADARPTEAVADGLGYQVXXXXXXXXXXXAVLELAASGEAEELMSEAALARRRREGELREGGEATDEADRVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVLVGADEVRGG-----LEEAGGADG-------EXXREGSIDRTGGSSGRSSGGSMLAETEAAVLMQSALRRKAAYREMKKVVAQNFIRMYDPGEGAFYWYNQATMESTWDKPAIIDLYFKK 1027
BLAST of mRNA_H-paniculata_contig14095.2498.1 vs. uniprot
Match: D8LE76_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE76_ECTSI) HSP 1 Score: 61.2 bits (147), Expect = 9.990e-6 Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 2476 SEEQAAVMLQSAFRRKAVYRRTKALIATNFVKLFDPMSGSLYWYNQKTGESSWDKPPII 2652
+EE+AAVMLQ+A+RR+ R T+AL+A+ K+FD +G+ Y++N +GE+SW KP +
Sbjct: 82 TEEEAAVMLQAAWRRRRGIRMTRALLASVVSKVFDESTGAHYYFNGLSGETSWSKPALF 140
BLAST of mRNA_H-paniculata_contig14095.2498.1 vs. uniprot
Match: A0A2R5GUZ1_9STRA (Peptidylprolyl isomerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUZ1_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.500e-5 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 2476 SEEQAAVMLQSAFRRKAVYRRTKALIATNFVKLFDPMSGSLYWYNQKTGESSWDKPPII 2652
+E +AA +Q+ FR +A R K LIAT + K FD G++++YN +TGESSWDKP +
Sbjct: 102 TESEAARFIQNLFRTRAARNRLKMLIATVYQKAFDE-DGNVFYYNTRTGESSWDKPAFL 159
BLAST of mRNA_H-paniculata_contig14095.2498.1 vs. uniprot
Match: A0A7S2RZZ6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RZZ6_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 8.710e-5 Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 2431 DRVRSKARKTITISASEEQAAVMLQSAFRRKAVYRRTKALIATNFVKLFDPMSGSLYWYNQKTGESSWDKPPII 2652
+RVR+K+ + T E+AA ++Q +RR+ + + ++ + K+FDP S Y++N KTGESSWDKP ++
Sbjct: 492 ERVRAKSHEWTT-----EEAASVIQGLWRRREARKNLLKVASSVYTKVFDPGSNDYYFFNTKTGESSWDKPVLL 560 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14095.2498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14095.2498.1 >prot_H-paniculata_contig14095.2498.1 ID=prot_H-paniculata_contig14095.2498.1|Name=mRNA_H-paniculata_contig14095.2498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=893bp MSERDLQQVELQYMRLEDAEAVYISKFEEAKRRKQDYSTYYSLAQQYGPLback to top mRNA from alignment at H-paniculata_contig14095:1212..5244- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14095.2498.1 ID=mRNA_H-paniculata_contig14095.2498.1|Name=mRNA_H-paniculata_contig14095.2498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4033bp|location=Sequence derived from alignment at H-paniculata_contig14095:1212..5244- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14095:1212..5244- >mRNA_H-paniculata_contig14095.2498.1 ID=mRNA_H-paniculata_contig14095.2498.1|Name=mRNA_H-paniculata_contig14095.2498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5358bp|location=Sequence derived from alignment at H-paniculata_contig14095:1212..5244- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |