prot_H-paniculata_contig14072.2490.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14072.2490.1
Unique Nameprot_H-paniculata_contig14072.2490.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length37
Homology
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: D7FXS5_ECTSI (Mg2+ transporter-e family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS5_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 4.430e-11
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    2 SLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            SLFLIVM SVLLGSALPFGFAR GVDPA+AGT+IQV
Sbjct:  254 SLFLIVMASVLLGSALPFGFARAGVDPANAGTTIQV 289          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: A0A7R9V570_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V570_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 1.480e-9
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MSLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            +SLF+IVM+SVLLG+ LPFG AR GVDPA+AGTSIQV
Sbjct:  252 LSLFMIVMSSVLLGTGLPFGLARLGVDPANAGTSIQV 288          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: A0A150GIY2_GONPE (MgtE domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GIY2_GONPE)

HSP 1 Score: 58.9 bits (141), Expect = 2.150e-9
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    2 SLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            SLFLIVMTSV+LG+ LPF  AR GVDPA+AGTSIQV
Sbjct:  153 SLFLIVMTSVVLGTGLPFALARAGVDPANAGTSIQV 188          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: A0A250XGX6_9CHLO (MgtE domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XGX6_9CHLO)

HSP 1 Score: 59.3 bits (142), Expect = 2.570e-9
Identity = 28/37 (75.68%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MSLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            +SLFLIVMTSV+LG+ LPF  A+TGVDPA+AGT+IQV
Sbjct:  228 LSLFLIVMTSVILGTGLPFALAKTGVDPANAGTTIQV 264          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: D8U437_VOLCA (MgtE domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U437_VOLCA)

HSP 1 Score: 58.9 bits (141), Expect = 4.190e-9
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    2 SLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            SLFLIVMTSV+LG+ LPF  AR GVDPA+AGTSIQV
Sbjct: 2393 SLFLIVMTSVVLGTGLPFALARAGVDPANAGTSIQV 2428          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: A0A2K3D1M8_CHLRE (MgtE domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D1M8_CHLRE)

HSP 1 Score: 58.9 bits (141), Expect = 4.240e-9
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    2 SLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            SLFLIVMTSV+LG+ LPF  AR GVDPA+AGTSIQV
Sbjct:  318 SLFLIVMTSVVLGTGLPFALARAGVDPANAGTSIQV 353          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: A0A836BBC7_9CHLO (MgtE domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBC7_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 4.240e-9
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    2 SLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            SLFLIVMTSV+LG+ LPF  AR GVDPA+AGTSIQV
Sbjct:  407 SLFLIVMTSVVLGTGLPFALARAGVDPANAGTSIQV 442          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: A0A8J4CLL9_9CHLO (MgtE domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CLL9_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 4.250e-9
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    2 SLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            SLFLIVMTSV+LG+ LPF  AR GVDPA+AGTSIQV
Sbjct:  363 SLFLIVMTSVVLGTGLPFALARAGVDPANAGTSIQV 398          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: A0A5J4XTD3_9CHLO (Mg2+ transporter-e family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XTD3_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 7.090e-9
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MSLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            +SLF+IVMTSVL G+ LPFG A+ G+DPA+AGTS+QV
Sbjct:  177 LSLFMIVMTSVLTGTMLPFGLAKAGIDPANAGTSVQV 213          
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Match: A0A835SIG2_CHLIN (MgtE domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SIG2_CHLIN)

HSP 1 Score: 58.2 bits (139), Expect = 7.940e-9
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    2 SLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV 37
            SLF+IVMTSV+LG+ LPF  AR GVDPA+AGTSIQV
Sbjct:  392 SLFMIVMTSVVLGTGLPFALARAGVDPANAGTSIQV 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14072.2490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXS5_ECTSI4.430e-1188.89Mg2+ transporter-e family n=1 Tax=Ectocarpus silic... [more]
A0A7R9V570_9CHLO1.480e-978.38Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A150GIY2_GONPE2.150e-980.56MgtE domain-containing protein n=1 Tax=Gonium pect... [more]
A0A250XGX6_9CHLO2.570e-975.68MgtE domain-containing protein n=1 Tax=Chlamydomon... [more]
D8U437_VOLCA4.190e-980.56MgtE domain-containing protein n=1 Tax=Volvox cart... [more]
A0A2K3D1M8_CHLRE4.240e-980.56MgtE domain-containing protein n=2 Tax=Chlamydomon... [more]
A0A836BBC7_9CHLO4.240e-980.56MgtE domain-containing protein n=1 Tax=Chlamydomon... [more]
A0A8J4CLL9_9CHLO4.250e-980.56MgtE domain-containing protein n=2 Tax=Volvox reti... [more]
A0A5J4XTD3_9CHLO7.090e-970.27Mg2+ transporter-e family n=1 Tax=Trebouxia sp. A1... [more]
A0A835SIG2_CHLIN7.940e-977.78MgtE domain-containing protein n=1 Tax=Chlamydomon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038048Magnesium transporter MgtE, transmembrane domainGENE3D1.10.357.20coord: 1..36
e-value: 7.8E-6
score: 27.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.751
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
IPR036739SLC41 divalent cation transporters, integral membrane domain superfamilySUPERFAMILY161093MgtE membrane domain-likecoord: 2..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14072contigH-paniculata_contig14072:6390..6500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14072.2490.1mRNA_H-paniculata_contig14072.2490.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14072 6372..6500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14072.2490.1 ID=prot_H-paniculata_contig14072.2490.1|Name=mRNA_H-paniculata_contig14072.2490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=37bp
MSLFLIVMTSVLLGSALPFGFARTGVDPAHAGTSIQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038048MgtE_transmem
IPR036739SLC41_membr_dom_sf