prot_H-paniculata_contig1405.2477.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1405.2477.1
Unique Nameprot_H-paniculata_contig1405.2477.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length239
Homology
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BLAST of mRNA_H-paniculata_contig1405.2477.1 vs. uniprot
Match: D8LBX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX6_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 2.950e-49
Identity = 90/132 (68.18%), Postives = 106/132 (80.30%), Query Frame = 0 
Query:  107 EWERIAQDTLESVLGPQFAAKYQMYTEEASEVMRSLSKIFSNLMKRYVVGEIVLESMTIHLSTAVWRDLATSAFLFWQEGGAGIRDLLPSKAVEFRFDVLLAARDMGCDSKPRTALEIVTALTKRTMVNLGR 238
            EWER+AQ TLE   G +F AKYQMYTEEA+ +MR LS+IF NLMKRYV+GEIVL+ M+I LS AVWRDL TS+F  W EG + +R+LLP++ VEFRFDV L A +MGC S  RTALEIVTALTKRTM+ LGR
Sbjct:   34 EWERVAQATLEHAFGHEFTAKYQMYTEEAASIMRRLSRIFVNLMKRYVLGEIVLQDMSIQLSAAVWRDL-TSSFFQW-EGASVVRELLPARGVEFRFDVSLTASEMGCASGSRTALEIVTALTKRTMLQLGR 163
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1405.2477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBX6_ECTSI2.950e-4968.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1405contigH-paniculata_contig1405:19084..25895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1405.2477.1mRNA_H-paniculata_contig1405.2477.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1405 19084..25895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1405.2477.1 ID=prot_H-paniculata_contig1405.2477.1|Name=mRNA_H-paniculata_contig1405.2477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
FNKTSNVRDTDRHPRTVSPHSSSLSTGVVGGARVPSAAAAAAVTGGRGLH
GSEDGFFHHGTAGGHHLKRTGSLDWLRPGSSGPAAAATAVGGDGSDTEGG
VNPGFDEWERIAQDTLESVLGPQFAAKYQMYTEEASEVMRSLSKIFSNLM
KRYVVGEIVLESMTIHLSTAVWRDLATSAFLFWQEGGAGIRDLLPSKAVE
FRFDVLLAARDMGCDSKPRTALEIVTALTKRTMVNLGR*
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