prot_H-paniculata_contig14021.2460.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14021.2460.1
Unique Nameprot_H-paniculata_contig14021.2460.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length487
Homology
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BLAST of mRNA_H-paniculata_contig14021.2460.1 vs. uniprot
Match: A0A6H5JZG3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG3_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 5.830e-13
Identity = 56/164 (34.15%), Postives = 83/164 (50.61%), Query Frame = 0 
Query:  142 SNGESTLVTPSSCTPQPFPMGIA--LRRHIEEMTPQLSLLKDVAGRADARRGISGLAMSCHLMIVQTAKHDQEDALESLKRCIEVLVSYPGVCTM-MSPHMIHMMTSLLAAVDD---REQYQQLRDIHNSIGHR-RSPIPPIEEVQRVGNTCNNVLCRLIHTSI 298
            S  E+ + T  SC  +   M +   +   I   +     L+D A R   R+GI GL ++  L+  + AK D   A+E + RC+EV  ++PGVC   M  H+ H+M + LAA+ +   R  Y +LR  +NS      SPIPP EE Q V + C+   CR +   I
Sbjct:  319 SENEAGIRTACSCRVREASMAVVDTMASRINNHSCDFERLEDAADRPLIRQGIGGLIINGTLVFEKAAKGDFSGAVERIDRCVEVFETFPGVCRFFMGSHVAHIMVTALAAIGNSRTRGMYDRLRRAYNSTRFPDSSPIPPFEEWQGVSSFCDTFYCRTMELLI 482
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14021.2460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZG3_9PHAE5.830e-1334.15Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14021contigH-paniculata_contig14021:317..5885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14021.2460.1mRNA_H-paniculata_contig14021.2460.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14021 284..6165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14021.2460.1 ID=prot_H-paniculata_contig14021.2460.1|Name=mRNA_H-paniculata_contig14021.2460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=487bp
MEACMNVETVETARACMSMAVLYTSTMQQDRSRDGVLLADAIISKLGPGA
VPLEIVEMTRYIGEMPFLQGDVSDPAILRAYCERRDPPLQAHGTFTEAGL
AVHIMKFDRRLLQAIFSDMPSVACTDNTVEVEERNGTSAHDSNGESTLVT
PSSCTPQPFPMGIALRRHIEEMTPQLSLLKDVAGRADARRGISGLAMSCH
LMIVQTAKHDQEDALESLKRCIEVLVSYPGVCTMMSPHMIHMMTSLLAAV
DDREQYQQLRDIHNSIGHRRSPIPPIEEVQRVGNTCNNVLCRLIHTSITE
GQDCAASPLSDLYGTAIEGGKLDVFSSDSPRNSYPAGQHDDHDNISVVLS
TLETCFSPEFSPGTTCSQQNILSRQPEMEKGTGVVEDAGSTILFDSGTSV
VGCDESSWPTSNSAPQSTSVVGADSVVNESADTSDTTRVANRPVIDEEEN
QPMAEDLLVAEDWLDATHALMLQQADAKTGSLAYGS*
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