mRNA_H-paniculata_contig14004.2448.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14004.2448.1
Unique NamemRNA_H-paniculata_contig14004.2448.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: D7G5W8_ECTSI (Putative homoaconitate hydratase, c-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W8_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 4.710e-155
Identity = 208/234 (88.89%), Postives = 224/234 (95.73%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQGKRWAVEDLIAEEAK 702
            CNMAIEAGGKNGVIPADDVTTAYV+ARNAGNKPYEIF AD NAKY+SK+ YD+ +L+PVVAKPHSPDNKALAKDCR  KIDRVYIGSCTGGKTEDFAAAARILQN+KVRVPTFLVPAT+KVY+DIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMN+PFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASA+TGYVTDPREVF FDQ KRWA+ED++ + A+
Sbjct:   41 CNMAIEAGGKNGVIPADDVTTAYVNARNAGNKPYEIFKADPNAKYFSKKRYDMSNLEPVVAKPHSPDNKALAKDCRGTKIDRVYIGSCTGGKTEDFAAAARILQNQKVRVPTFLVPATQKVYNDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNQPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAITGYVTDPREVFAFDQDKRWAIEDILTDSAR 274
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: A0A6H5KHV3_9PHAE (3-isopropylmalate dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHV3_9PHAE)

HSP 1 Score: 440 bits (1132), Expect = 2.580e-151
Identity = 207/234 (88.46%), Postives = 224/234 (95.73%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQGKRWAVEDLIAEEAK 702
            CNMAIEAGGKNGVIPADDVT AYV+ARNAGN+PYEIF AD NAKY+SK++YD+ +L+PVVAKPHSPDNKALAKDCRD KIDRVYIGSCTGGKTEDFAAAARILQN+KVRVPTFLVPAT+KVY+DIQTLKIGGRTL SIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASA+TGYVTDPREVF FDQ KRWA+ED++ + A+
Sbjct:  298 CNMAIEAGGKNGVIPADDVTMAYVNARNAGNRPYEIFKADPNAKYFSKKTYDMSNLEPVVAKPHSPDNKALAKDCRDTKIDRVYIGSCTGGKTEDFAAAARILQNQKVRVPTFLVPATQKVYNDIQTLKIGGRTLGSIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAITGYVTDPREVFGFDQDKRWAIEDILTDSAR 531
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: X2KY86_SCYLO (3-isopropylmalate dehydratase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KY86_SCYLO)

HSP 1 Score: 440 bits (1131), Expect = 6.970e-151
Identity = 207/230 (90.00%), Postives = 223/230 (96.96%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQGKRWAVEDLIA 690
            CNMAIEAGGKNGVIPAD VTTAYVDARNAGNKPYEIF AD NAKY+SKQ YD+G+L+PVVAKPHSPDNKALA+DCRD KIDRVYIGSCTGGKTEDFAAAARILQN+KVRVPTFLVPAT+KVY+DIQT+ IGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHK AGIYLASPYTAAASA+TG+VTDPREVF+FD+GKRWAVED+++
Sbjct:  317 CNMAIEAGGKNGVIPADHVTTAYVDARNAGNKPYEIFNADQNAKYFSKQRYDVGNLEPVVAKPHSPDNKALARDCRDTKIDRVYIGSCTGGKTEDFAAAARILQNQKVRVPTFLVPATQKVYNDIQTMTIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKGAGIYLASPYTAAASAITGFVTDPREVFEFDKGKRWAVEDILS 546
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: A0A835YVF1_9STRA (3-isopropylmalate dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF1_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 1.530e-134
Identity = 184/229 (80.35%), Postives = 206/229 (89.96%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQGKRWAVEDLI 687
            CNMAIEAGGKNG+IPAD++T AYVD RNAG KPYE+F ADA A Y++ ++YD+  L+PVVA PHSPDNKALAKDCRD KIDRVYIGSCTGGKTEDFAAAAR+L  +KVRVPTFLVPAT+KVY+DIQ LKI GRT+A IFREAGC+EPASPSCAACLGGPADT+ARMNEP  CVSTTNRNFPGRMGHKDAGI+LASPYTAAASAVTGYVTDPREV+ FD+ +R  VE L+
Sbjct:  246 CNMAIEAGGKNGIIPADEITRAYVDQRNAGQKPYEVFAADAKATYFADKTYDMSQLEPVVAMPHSPDNKALAKDCRDTKIDRVYIGSCTGGKTEDFAAAARVLDGQKVRVPTFLVPATQKVYNDIQNLKINGRTMAQIFREAGCIEPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVYGFDKARRHPVETLL 474
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: W7TZ20_9STRA (3-isopropylmalate dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ20_9STRA)

HSP 1 Score: 389 bits (998), Expect = 3.090e-131
Identity = 179/222 (80.63%), Postives = 205/222 (92.34%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQGKR 666
            CNMAIEAGGKNG+IPAD+VTTAYVDARNAG++PY IF AD +A Y++K +YDL SL+PVVAKPHSPDN+ALA++CRD+KIDRVYIGSCTGGKTEDF AAARILQ  KV VPTFLVPAT++VYDD+ +L +GGRTLA IFR+AGC++PASPSCAACLGGPADT+ARMNEP  CVSTTNRNFPGRMGHKDAGI+LASPYTAAASAVTGYVTDPREVF+F Q ++
Sbjct:  280 CNMAIEAGGKNGIIPADEVTTAYVDARNAGSRPYTIFEADPDASYFAKYAYDLSSLEPVVAKPHSPDNRALARECRDIKIDRVYIGSCTGGKTEDFVAAARILQQNKVSVPTFLVPATRRVYDDLYSLTLGGRTLAQIFRDAGCIDPASPSCAACLGGPADTFARMNEPLLCVSTTNRNFPGRMGHKDAGIFLASPYTAAASAVTGYVTDPREVFEFSQTRQ 501
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: A0A2V3INF8_9FLOR (3-isopropylmalate dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INF8_9FLOR)

HSP 1 Score: 336 bits (861), Expect = 1.010e-109
Identity = 156/228 (68.42%), Postives = 186/228 (81.58%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQGKRWAVEDL 684
            CNMA+EAGGKNG+I ADDVT AY+ AR A  KP  +F +D  A +++  +YD+  ++PVVAKPHSPDN+ALA++C DV+IDR Y+GSCTGGKTEDF AAAR+LQ +KV VPTFLVPATKKVYDD++ L+I G TL  IF  AGC+   +P CAACLGGP+DT+AR+NEP  CVSTTNRNFPGRMGHK+  IYLASPYTAAASAVTGYVTDPREV+DFD  +R   E L
Sbjct:  356 CNMAVEAGGKNGLIEADDVTEAYLAARGA--KPTAVFRSDEQASFFADYTYDVSKIEPVVAKPHSPDNRALARECSDVRIDRAYVGSCTGGKTEDFLAAARVLQGRKVSVPTFLVPATKKVYDDVENLRINGETLKEIFVNAGCIGLGNPGCAACLGGPSDTFARLNEPLVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASAVTGYVTDPREVYDFDMSERHPTETL 581
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: R7QD35_CHOCR (3-isopropylmalate dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD35_CHOCR)

HSP 1 Score: 330 bits (846), Expect = 1.690e-108
Identity = 157/228 (68.86%), Postives = 182/228 (79.82%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQGKRWAVEDL 684
            CNMA+EAGGKNG+I AD  T AY+ AR  G+KP EIF  D  A +Y+   Y++  L+PVVAKPHSPDN+ALAK+C DV+IDR YIGSCTGGKTEDF AAAR+LQ +KV VPTFLVPAT+KVY+D++TL+I G TL  IF  AGC+    P CAACLGGP+DT+AR+NEP  CVSTTNRNFPGRMG K+  IYLASPYT AASAVTGYVTDPREV+DFD  KR   E L
Sbjct:  273 CNMAVEAGGKNGLIAADHRTEAYLAAR--GSKPTEIFHTDEEASFYADYKYNVADLEPVVAKPHSPDNRALAKECSDVRIDRCYIGSCTGGKTEDFLAAARVLQGRKVAVPTFLVPATQKVYEDVETLRINGETLKDIFYNAGCIALGDPGCAACLGGPSDTFARLNEPLVCVSTTNRNFPGRMGDKEGQIYLASPYTTAASAVTGYVTDPREVYDFDANKRHPTETL 498
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: A0A5J4YMP4_PORPP (3-isopropylmalate dehydratase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMP4_PORPP)

HSP 1 Score: 328 bits (841), Expect = 1.580e-107
Identity = 155/229 (67.69%), Postives = 185/229 (80.79%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQGKRWAVEDLI 687
            CNMAIEAGGKNG+I AD+ T AY+  R    KP+ +  +D  A+Y++   Y    L+PVVAKPHSPDN+ LA++CRD KIDRVYIGSCTGGK+EDF AAAR+LQ KKV+VPT+LVPAT++V+ D+  +KI G+TLA IF EAGC+EPA+PSCAACLGGP DT+ARMN    CVSTTNRNFPGRMG KD+ +YLASPYTAAASAVTGYVTDPREVF+FD+ KR   E  I
Sbjct:  289 CNMAIEAGGKNGIIAADETTFAYL--RGKTEKPFTVLNSDEEAQYFADYKYQASELEPVVAKPHSPDNRDLARNCRDHKIDRVYIGSCTGGKSEDFIAAARLLQGKKVKVPTYLVPATQRVWQDVYNIKIKGQTLAEIFSEAGCVEPAAPSCAACLGGPKDTFARMNTAEVCVSTTNRNFPGRMGSKDSSVYLASPYTAAASAVTGYVTDPREVFEFDKQKRVTAEQAI 515
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: A0A7J7IDB7_9RHOD (3-isopropylmalate dehydratase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDB7_9RHOD)

HSP 1 Score: 326 bits (836), Expect = 7.510e-107
Identity = 149/219 (68.04%), Postives = 182/219 (83.11%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPREVFDFDQ 657
            CNMAIEAGGKNG++PAD++T  YV AR    KP+EIF  D NA +Y+ + YDL  L+PVVAKPHSPDN+ LA++C DV+I RVYIGSCTGGKTEDF AAARILQ ++VRVPTFLVPAT+++Y D++T K+ G+TL  IF EAGCL P +PSCAACLGGP DT+ R+N P   +STTNRNFPGRMG K + +YLASPYTAAASA+TG++TDPR+V+DFDQ
Sbjct:  285 CNMAIEAGGKNGIVPADEITLEYVRART--QKPFEIFQTDPNATFYADRRYDLSKLEPVVAKPHSPDNRDLARNCEDVQITRVYIGSCTGGKTEDFVAAARILQGRQVRVPTFLVPATRRIYADLETRKLNGKTLMEIFTEAGCLPPGAPSCAACLGGPKDTFGRLNGPEVVISTTNRNFPGRMGDKSSAVYLASPYTAAASALTGHITDPRKVYDFDQ 501
[Close]
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Match: K9W3H2_9CYAN (Homoaconitate hydratase family protein n=12 Tax=Cyanobacteria TaxID=1117 RepID=K9W3H2_9CYAN)

HSP 1 Score: 318 bits (815), Expect = 1.330e-104
Identity = 147/213 (69.01%), Postives = 180/213 (84.51%), Query Frame = 1 
Query:    1 CNMAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYDLGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARILQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSCAACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAASAVTGYVTDPRE 639
            CNMAIEAGGKNG +  D+ T  YV  R+  NKP+E    DA+A++YS + YD+  L+PVVAKPHSPDN+ALA++CRDVKIDRVYIGSCTGGKT DF  AA++L+ ++V+VPT++VPAT+KVY+D+ T K  G+TL+ I  +AGC+EPA+PSCAACLGGP DT+ RMNEP  CVSTTNRNFPGRMG+K+AGIYLASPYTAAASA+TGYVTDPRE
Sbjct:  227 CNMAIEAGGKNGTVAPDETTFEYV--RDRTNKPFEPVYTDADARFYSDRQYDVSQLEPVVAKPHSPDNRALARECRDVKIDRVYIGSCTGGKTSDFMYAAQVLKGQQVKVPTYIVPATQKVYEDLFTTKYDGKTLSEILLDAGCIEPAAPSCAACLGGPKDTFGRMNEPEICVSTTNRNFPGRMGNKEAGIYLASPYTAAASAITGYVTDPRE 437
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14004.2448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5W8_ECTSI4.710e-15588.89Putative homoaconitate hydratase, c-terminal part ... [more]
A0A6H5KHV3_9PHAE2.580e-15188.463-isopropylmalate dehydratase n=1 Tax=Ectocarpus s... [more]
X2KY86_SCYLO6.970e-15190.003-isopropylmalate dehydratase n=1 Tax=Scytosiphon ... [more]
A0A835YVF1_9STRA1.530e-13480.353-isopropylmalate dehydratase n=1 Tax=Tribonema mi... [more]
W7TZ20_9STRA3.090e-13180.633-isopropylmalate dehydratase n=2 Tax=Monodopsidac... [more]
A0A2V3INF8_9FLOR1.010e-10968.423-isopropylmalate dehydratase n=1 Tax=Gracilariops... [more]
R7QD35_CHOCR1.690e-10868.863-isopropylmalate dehydratase n=1 Tax=Chondrus cri... [more]
A0A5J4YMP4_PORPP1.580e-10767.693-isopropylmalate dehydratase n=1 Tax=Porphyridium... [more]
A0A7J7IDB7_9RHOD7.510e-10768.043-isopropylmalate dehydratase n=1 Tax=Cyanidiococc... [more]
K9W3H2_9CYAN1.330e-10469.01Homoaconitate hydratase family protein n=12 Tax=Cy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14004contigH-paniculata_contig14004:1066..6636 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score433.7
Seed ortholog evalue5.3e-119
Seed eggNOG ortholog2880.D7G5W8
Preferred nameLEU1
KEGG rclassRC00497,RC00976,RC00977,RC01041,RC01046,RC03072
KEGG koko:K00749,ko:K01702,ko:K01703
KEGG ReactionR03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170
KEGG Pathwayko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230
KEGG ModuleM00432,M00535
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010035,GO:0010038,GO:0010494,GO:0016053,GO:0016143,GO:0016144,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019748,GO:0019752,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0032991,GO:0035770,GO:0036464,GO:0042221,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0046394,GO:0046686,GO:0050486,GO:0050896,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901657,GO:1901659,GO:1990904
EggNOG free text desc.3-isopropylmalate dehydratase activity
EggNOG OGsCOG0065@1,KOG0454@2759
Ec32 ortholog descriptionHomoaconitate hydratase
Ec32 orthologEc-13_001950.1
EC2.4.1.183,4.2.1.33,4.2.1.35
COG Functional cat.E
CAZyGT5
BiGG ReactioniMM904.YGL009C,iND750.YGL009C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko01003
Exons5
Model size702
Cds size696
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14004.2448.1prot_H-paniculata_contig14004.2448.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14004 1066..6630 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929113.1623552-CDS-H-paniculata_contig14004:1065..12061622929113.1623552-CDS-H-paniculata_contig14004:1065..1206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 1066..1206 -
1691480736.4403932-CDS-H-paniculata_contig14004:1065..12061691480736.4403932-CDS-H-paniculata_contig14004:1065..1206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 1066..1206 -
1622929113.1800716-CDS-H-paniculata_contig14004:3233..34071622929113.1800716-CDS-H-paniculata_contig14004:3233..3407Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 3234..3407 -
1691480736.4547362-CDS-H-paniculata_contig14004:3233..34071691480736.4547362-CDS-H-paniculata_contig14004:3233..3407Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 3234..3407 -
1622929113.1983087-CDS-H-paniculata_contig14004:3845..39111622929113.1983087-CDS-H-paniculata_contig14004:3845..3911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 3846..3911 -
1691480736.464084-CDS-H-paniculata_contig14004:3845..39111691480736.464084-CDS-H-paniculata_contig14004:3845..3911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 3846..3911 -
1622929113.2126-CDS-H-paniculata_contig14004:5592..57871622929113.2126-CDS-H-paniculata_contig14004:5592..5787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 5593..5787 -
1691480736.47321-CDS-H-paniculata_contig14004:5592..57871691480736.47321-CDS-H-paniculata_contig14004:5592..5787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 5593..5787 -
1622929113.2280698-CDS-H-paniculata_contig14004:6510..66301622929113.2280698-CDS-H-paniculata_contig14004:6510..6630Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 6511..6630 -
1691480736.4825504-CDS-H-paniculata_contig14004:6510..66301691480736.4825504-CDS-H-paniculata_contig14004:6510..6630Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14004 6511..6630 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929113.2462208-UTR-H-paniculata_contig14004:6630..66361622929113.2462208-UTR-H-paniculata_contig14004:6630..6636Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14004 6631..6636 -
1691480736.492391-UTR-H-paniculata_contig14004:6630..66361691480736.492391-UTR-H-paniculata_contig14004:6630..6636Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14004 6631..6636 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14004.2448.1

>prot_H-paniculata_contig14004.2448.1 ID=prot_H-paniculata_contig14004.2448.1|Name=mRNA_H-paniculata_contig14004.2448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
MAIEAGGKNGVIPADDVTTAYVDARNAGNKPYEIFTADANAKYYSKQSYD
LGSLDPVVAKPHSPDNKALAKDCRDVKIDRVYIGSCTGGKTEDFAAAARI
LQNKKVRVPTFLVPATKKVYDDIQTLKIGGRTLASIFREAGCLEPASPSC
AACLGGPADTYARMNEPFQCVSTTNRNFPGRMGHKDAGIYLASPYTAAAS
AVTGYVTDPREVFDFDQGKRWAVEDLIAEEAK
back to top

mRNA from alignment at H-paniculata_contig14004:1066..6636-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14004.2448.1 ID=mRNA_H-paniculata_contig14004.2448.1|Name=mRNA_H-paniculata_contig14004.2448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5571bp|location=Sequence derived from alignment at H-paniculata_contig14004:1066..6636- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCAACATGGCCATAGAGGCGGGGGGAAAGAACGGAGTCATTCCTGCGGA
TGACGTGACTACTGCTTACGTGGACGCCAGAAATGCTGGGAACAAGCCTT
ACGAGATTTTCACGGCCGATGCCAATGTGAGTGCAGCTCTTGTATTTTAT
TCAGGGTGTTCGCCCGATTTCTCAGATTAGCGATAGGGCATATTAGAGAT
ACAGGGAACTAGAAAGCACATGAATGAACAATAAACAAGGCATTACCAAT
GACAGAATATTAGTATTATTCAAACCAAATGTAATACGCATGGGGATAAT
TAAGTGTTGTGGTAGTGCGGACGACGAATAATCGAATCAAAGCAACACAA
GATGTGTATTTGTCTTGATGTACTATTGTACTATGTCATCATCCGTCGTT
CCTACAGTTAAGCCCCGCTATCACCGGGACCGGTATACTCCGTATATATG
TGTTTACTTCCAAGTTGCTCGGTCCCCATTTTCCGCTCCGTCTTCTCAAG
GACACGTTTTCAATGGCCTAAGAACTACGATATTTCAAATATGAGTAAGC
CCCCCTCCCTAGTTTGGTCCGTTTGTGTACATAGGTAATCCAGTAGTGTT
AGCAGCACTCAGCATATCTCCGGCTAGTGTGACTATTACTGTTATTGTTG
TGCCTTCTTTCCATGTTACTTTTTGCTACAAAATTCATTTTCCACGCTGT
GTTTCCATGGTGTCGATGCTTATTCTATCTTCCCGGGCTTACTGCTAAAT
GGGGCAATTGGTGCATGTGTTGTTGCTAGGCTTTATACTGTTGCCCCTTT
GTTTCTCCCCCCAATCGTTCCCATCGTAAAAATTTGAAAAACCTTGCAGG
CAAAGTACTACTCTAAGCAGAGTTATGACCTAGGCAGCCTAGATCCGGTC
GTGGCGAAGCCGCACTCGCCAGATAACAAGGCCCTCGCTAAGGACTGCAG
AGACGTGAAGATCGACCGCGTTTACATCGGGTCATGCACTGGAGGGAAAA
CAGAGGATTTCGCCGCTGCTGCACGAATCCTCCAAAACAAAAAGGTCGGG
TAAACACATGGTGCGCCATCAATGTTCATCATTTGTTTTTACCATTTTTG
CTACCACATGTTTGAGTTTTCCAAAAAACAACAACGCAATTTAGCGCCTT
TTTACGTGTATATATGGCGCATATAATTTTGCATGGAAGAACATATCACA
GTACATATATTTTTTTCTTGTATTTTTCAGATATATATATGTTTTTTTTT
CAGGTATATACCTTATCTGAGGGCGTGTCTTATCATTTTTTCCTGGCGTT
GGCGAGGTACAGTCAGCCCACGTGTTGCTTTCAACGTACTTGATTGCGTG
AGGAATTGCGTGAGGAAGAGAGACCTGTTTGTTCAACTCTTGGGGAAGAA
AGTGGATACTTCCTCTGTGCCATAAGTGAAGTGGTTTGTTTTTAGCAGAT
GATATCTTCAGATGTAAGACTGTTGAGAGGCTGCGGTTGAAATCCTTGGA
AAGCTAAAGTATGATGGAATCATATTCGCTATTCAAAATTGAACTCCGAT
GTGTGTATCAGAATTTTTGGACGCTCAAGGTTGAGCTTATTTGGACCGAT
TTCCACGTTTTTTCATTGGGAAATACGAAAAAGGGGGCCTAATTTGGCCT
TTTTCGACCGTTTTTTTCTTTTGCGCCGCGCGCTCCCTATGATTTTTTTG
CCAATTTCCATGCATTATTGGGGATTAATGACAAAATCATGTAAGATTAT
GACAAGAAAAAAAGTGTAAGATGGTTGCGTGCCTCTATAAACTCAACTGA
CTTTACTTACGGCAGAGAGGAAATATCTCGTGACGGAACGAGCAATACGT
TTGCGAAGCGCCATAGGGATTGGTTTCTAGTAAGGGAGAATTTTTCAATA
TTTTTCAAGTACACAGCCCGTTAGCGTTATCTCAGGTTCCGACGAGTGTG
TCGTTTTTTGTTTGTTTTCTCGCCGGTTCGGGTCTTACGGTAGCCTTTGC
GTATAGTATAGAGAGCGACAACGGGCAACTGTGGGGCTTATGTTCGTAAC
AACCTCGTAAGGAAGAAGCTCTGCACAGCTGATTAGGGTGTCGTAGGCTC
GTGTAGAGCCAGAGAGTTAATGAGTCGGGTAGAGTTTGAGGTGAGCAAGA
GAAAGTTGCGAATCTTTCAGGTAGGTAGACAGCAAGTTAAGGTAAATCTG
TGCACTGTTTTTGATCTTGGAATCATTCGCATATTTTGATATAAGGCGCG
GCAACCAATGCCCCTACACCCCCTACCCCCTTTGGCTCATCGTGTTTCAT
TTGTAAACTTCTGAGAAACGACTGTTTCGCGTACATGTTTAGTGCTGTAT
GTCTACCCTGCCTCAGCTGCTCCGGATGCTCGGGTGCTTGAACAACGCGC
GTCGGTGGCGCGATATTTTGTTGAAAAATATTTTCAAATGGAGGGATAAT
CAGTAAGCTACCTGACGCACGAATTCTACCGAGAAATGCAGATAATACGC
CCCCACGCGTGCATCTCTCGAATTTTCTCGATACCAACGACAGCGTGGAA
CGTGGAGGTGCATGAATGATTCGTCCTGCTAGGTGCACAAGCGCGTGAAC
AAAGAGCACAGTCCGTGGAGTTGTGACCATCGAAGTGATGATATCTCCTC
ATATCTCATCTCTTTGTTGTCTCTGCGGTATCTCACGTCCTAATCGTCGA
TGATTTGTACGGTCCTTGTTTACAGGTTCGTGTGCCAACTTTCCTGGTGC
CTGCTACCAAGAAGGTCTATGACGACATCCAAACACTGAAGGTGCGTGCG
TGTGAGCTGGTTGACTCTGCACCGAGATGGCGAATTGTGCACTGATTGCT
TGGTTTCTGTGTAAAAAACGTTGCCCAGGTCGATTTATGTGTTCTAACAC
ATTGCAATAGCAGAATTGCGTATATTATTTACCCTCGGACTTCCTCGGTA
GCGGTTATTTCGTTTTATGTGATGCGCGGGATCTCCTCCCCCAGGTCGCA
GTAATTTCCCCTGTTGTAGACGTTGTTCGTCAGACAGCTGGTCCAAAACA
AACAGTATCTTCTGGAACATGGCACAGACACGGGGTTGACGGCATGGTGT
GATTGCAGCATGCGCAGGCCTAAAAAGAAAAAGTCTAATTAATGCCTTTT
CCTGACACTCTCCCCCTAGACATAATGCCCCATGACGTCCTTGGTATTTG
TTGCTCATGTGTGGATATATGATTTACAGATCGGCGGGCGCACGCTTGCA
TCTATCTTCCGTGAGGCGGGATGCCTCGAGCCTGCGTCTCCATCCTGTGC
CGCCTGCTTGGGAGGACCTGCGGATACTTACGCGCGCATGAATGAACCCT
TTCAGTGCGTGTCCACGACGAACCGCAATTTCCCTGGACGGATGGGACAT
AAGGTATGTATAGATGTATATGTATGTTAACTACGTGGACACACTTTTGC
TCTTGCCTTCTTCTTGCTTGCTTCTTGCTTGCTTTTTGCTTGCTTCTTTT
TTTTTTTCCTCGTTTTGTCGTTTTGTTATGCCTTTTTTCTGCCCCTCTTT
GCTGCCTCTTTCTCATGGATGATGGCGGTTTGTTTTGTGTTTCGACTCTC
TTTTGTGAAACCTACCTGCTAGAGAACTGGAGATACTCTTCTATGTATGT
CCCGTCTGTGCCTCCAGTATTTTTGTTTTGCAATATCAAAACGAAATGTA
TTGGATCGCTGGGAGAGTGCATGAAGTGCTGCTTTAAACCTCTTTCGTTT
GAGGACCTTCTAATCGATACTAAGGGACCTAGTGACCTTTCTGCCATTGT
AAGTTGTTCTGTTGGTCGCGCCTTTGGCACTGAGAACCAATCGTTAGTTT
CCCAGCAGAGAGGTGTAGCGTGGTTTTTTCCGATAGAGCCAGAGTCGGCT
GTCCTGTGGTGGTTGCTGTCGAGGTAACTACTTTGGAAGGGACTGGGGTT
CCTAGTGTAGTCTTGATTATTCAAGGCAGTGTGTGGGCTATACGGCATTA
TTCAACAGCGAGTAGTGACTGCGAAACATATGTTTTTGGTATGTGCGAGG
TACGATTCCGAAGGCGTTTCAGGTGAAGGCTGACGAAACACTCCTTTCGG
TGTAATAATTATTGGCAACGGTTACCGTCTCACTACATCAATGTCCCATT
AACCTTTGAAGTTACAAGGAGTACCCCTCAAATTTGATATGGATAACAAC
GTGTTACGGCGGCCGTATGTTGATTTTTGATAATAGATTAGCTTTCTGTT
TGTCATGATGTCGGTGTCTTTGTAATCTAGTCCGCCCTTGATGGCCTCAT
GGTAAAACTAGACAAAGCTAGTTTTTGCGACGGCACGGTATTTGTTTGCT
GGGTGGTCAGAAAAACTGTTTTAGCGCCTTGGTCGTTTGGTCATGACGAT
GCGATCACTGTTGTACTATGCTGTCGTTTCCATGAGATACCGGTCGAGTT
CCCAACAGCAGTCTGCTCCAGTTGGTACATGTATTGAATGTGCTTCAGTA
CTTTGCTTGTTGGGTAAAAAAAAAATACTGATTTTAGCCTGCAGAGATTC
TGCACGAATTCGAGAGTAAATGTAGATTTTGCTTGATGCATGCAGGTGAG
CGTCACACTAGTGCACCCTGTTAATGGTCATAATCTGATCTAGTTGATAC
GTGTAGATACGTGAAGTTTGATTTCACCTTCATAACCTCAACGTGGGGAC
AATGCAGCTATTATATGAGCGTTTAGACCTTAATTGTAGTATCTAAAGCG
AGTGGGTTGACTTGGGAATGAAAATACCTGTGTGTTGTAGGTGGGTGTGA
TTCGTTCATGTAAAAACTAGTTTATCGTTTTGTACAAGACACGCGAATGA
TACAGTAATACTCTCTTGTCAAGGTTGTCGCAGGCTATGTTTGTGCTTGG
CAAAAAAAAACGCGAGAAGTTCTGGCACTCGGTCATGATAGGGGCTAAAC
CAACAGTGAATATCCCACAAAAGCACTCCCCCCCCCCCACCCTCCCTCCC
TCCCACGCATTGACGAATACGATTAATTCGGGTTGTTTGGACGAGATTTG
AAAAAGTATTCGTGTTAGGGTTCATCATGAGCACGTTTATTTCATATGCC
CAAGACGATTGGCGACTACGGCGAATGGATTCTGTTGAAATTTATGAGCA
GATGGTAATGAAGCTTTTTGTTTTATCAGCCGTCGGTCCCCCGCGTGGTT
GATCTTGAACGAATCCTGTTTCGAAAACATTGAAAAATTTGGTATATTCG
TGCGGGAGGTCTACTAGTCTAGTACTATACGCTCGTCCTCGAACAAGAAC
TCACGTTTAAACATCGGGGTGATAATTATCAGCGACAACGCTTGTATTGC
AGTAACATTAGCTTCTAATTCTCGTTGTATCTGGGACGTAACGACTTGAA
TGTTATTCGTTTTGTCTTTGTCTTCTATAGGATGCCGGAATCTACCTGGC
GTCGCCATATACAGCGGCCGCGTCAGCCGTGACGGGGTATGTAACTGACC
CTCGCGAGGTATTCGACTTCGACCAAGGGAAACGGTGGGCAGTCGAAGAC
CTCATCGCCGAGGAAGCTAAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig14004:1066..6636-

>mRNA_H-paniculata_contig14004.2448.1 ID=mRNA_H-paniculata_contig14004.2448.1|Name=mRNA_H-paniculata_contig14004.2448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at H-paniculata_contig14004:1066..6636- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCATAGAGGCGGGGGGAAAGAACGGAGTCATTCCTGCGGATGACGT
GACTACTGCTTACGTGGACGCCAGAAATGCTGGGAACAAGCCTTACGAGA
TTTTCACGGCCGATGCCAATATGGCCATAGAGGCGGGGGGAAAGAACGGA
GTCATTCCTGCGGATGACGTGACTACTGCTTACGTGGACGCCAGAAATGC
TGGGAACAAGCCTTACGAGATTTTCACGGCCGATGCCAATGCAAAGTACT
ACTCTAAGCAGAGTTATGACCTAGGCAGCCTAGATCCGGTCGTGGCGAAG
CCGCACTCGCCAGATAACAAGGCCCTCGCTAAGGACTGCAGAGACGTGAA
GATCGACCGCGTTTACATCGGGTCATGCACTGGAGGGAAAACAGAGGATT
TCGCCGCTGCTGCACGAATCCTCCAAAACAAAAAGGCAAAGTACTACTCT
AAGCAGAGTTATGACCTAGGCAGCCTAGATCCGGTCGTGGCGAAGCCGCA
CTCGCCAGATAACAAGGCCCTCGCTAAGGACTGCAGAGACGTGAAGATCG
ACCGCGTTTACATCGGGTCATGCACTGGAGGGAAAACAGAGGATTTCGCC
GCTGCTGCACGAATCCTCCAAAACAAAAAGGTTCGTGTGCCAACTTTCCT
GGTGCCTGCTACCAAGAAGGTCTATGACGACATCCAAACACTGAAGGTTC
GTGTGCCAACTTTCCTGGTGCCTGCTACCAAGAAGGTCTATGACGACATC
CAAACACTGAAGATCGGCGGGCGCACGCTTGCATCTATCTTCCGTGAGGC
GGGATGCCTCGAGCCTGCGTCTCCATCCTGTGCCGCCTGCTTGGGAGGAC
CTGCGGATACTTACGCGCGCATGAATGAACCCTTTCAGTGCGTGTCCACG
ACGAACCGCAATTTCCCTGGACGGATGGGACATAAGATCGGCGGGCGCAC
GCTTGCATCTATCTTCCGTGAGGCGGGATGCCTCGAGCCTGCGTCTCCAT
CCTGTGCCGCCTGCTTGGGAGGACCTGCGGATACTTACGCGCGCATGAAT
GAACCCTTTCAGTGCGTGTCCACGACGAACCGCAATTTCCCTGGACGGAT
GGGACATAAGGATGCCGGAATCTACCTGGCGTCGCCATATACAGCGGCCG
CGTCAGCCGTGACGGGGTATGTAACTGACCCTCGCGAGGTATTCGACTTC
GACCAAGGGAAACGGTGGGCAGTCGAAGACCTCATCGCCGAGGAAGCTAA
GGATGCCGGAATCTACCTGGCGTCGCCATATACAGCGGCCGCGTCAGCCG
TGACGGGGTATGTAACTGACCCTCGCGAGGTATTCGACTTCGACCAAGGG
AAACGGTGGGCAGTCGAAGACCTCATCGCCGAGGAAGCTAAG
back to top